Ataxia, cerebellar, Cayman type homolog (human) (Atcay)

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Finding cDNAs

UGID:285802 UniGene Mm.127681 Mus musculus (mouse) Atcay

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Ataxia, cerebellar, Cayman type homolog (human) (Atcay)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
NP_848777.1	ataxia, cerebellar, Cayman type homolog	M. musculus	100.0	371
NP_149053.1	caytaxin	H. sapiens	96.5	370
XP_001343600.2	PREDICTED: similar to caytaxin	D. rerio	73.6	329
NP_001088131.1	hypothetical protein LOC494836	X. laevis	63.3	334

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	brain; embryonic tissue; spinal cord; mixed; eye; sympathetic ganglion; nasopharynx

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	10
Map position:	10 C1\|10 43.0 cM
UniSTS entry:	Chr 10	BB077577
UniSTS entry:	Chr 10	(n/a)
UniSTS entry:	Chr 10	RH118337
UniSTS entry:	Chr 10	(n/a)

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

AK028298.1	Mus musculus 17 days embryo head cDNA, RIKEN full-length enriched library, clone:3322401A10 product:weakly similar to BCL2/ADENOVIRUS E1B 19-KDA PROTEIN-INTERACTING PROTEIN 2 [Mus musculus], full insert sequence	P
AK039411.1	Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330040P09 product:HYPOTHETICAL 42.0 KDA PROTEIN homolog [Macaca fascicularis], full insert sequence	P
AK038990.1	Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230081O07 product:weakly similar to BCL2/ADENOVIRUS E1B 19-KDA PROTEIN-INTERACTING PROTEIN 2 [Mus musculus], full insert sequence	P
AK038483.1	Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230019K19 product:HYPOTHETICAL 42.0 KDA PROTEIN homolog [Macaca fascicularis], full insert sequence	P
AK086723.1	Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930047M05 product:HYPOTHETICAL 42.0 KDA PROTEIN homolog [Macaca fascicularis], full insert sequence	P
BC048903.1	Mus musculus ataxia, cerebellar, Cayman type homolog (human), mRNA (cDNA clone MGC:56757 IMAGE:6491141), complete cds	PA
NM_178662.3	Mus musculus ataxia, cerebellar, Cayman type homolog (human) (Atcay), mRNA	P
AY349150.1	Mus musculus caytaxin (Atcay) mRNA, complete cds	P
AK162959.1	Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330089A02 product:ataxia, cerebellar, Cayman type homolog (human), full insert sequence	P

EST sequences (10 of 305) [Show all sequences]

CA750371.1	Clone IMAGE:6831896	brain	5' read	P
BY237280.1	Clone K230001C18	brain	5' read
BY237287.1	Clone K230001D05	brain	5' read
BY237874.1	Clone K230004A16	brain	5' read
BY238167.1	Clone K230005I04	brain	5' read
BY238262.1	Clone K230006A19	brain	5' read
BY238629.1	Clone K230007N23	brain	5' read
BY239340.1	Clone K230011G07	brain	5' read
BY239961.1	Clone K230015E20	brain	5' read
BY241486.1	Clone K230027A12	brain	5' read

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria