> COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana) (Cops8)
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UGID:282664     UniGene Mm.119177     Mus musculus (mouse)   Cops8 Order cDNA clone, Links
COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana) (Cops8)

Mouse protein-coding gene Cops8. Represented by 544 ESTs from 198 cDNA libraries. Corresponds to reference sequence NM_133805.3. [UniGene 282664 - Mm.119177]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_598566.3 Cops8 gene product M. musculus 100.0 208
NP_001013245.1 Cops8 gene product R. norvegicus 100.0 208
NP_006701.1 COPS8 gene product H. sapiens 98.6 208
NP_001087802.1 COP9 constitutive photomorphogenic homolog subunit 8 X. laevis 87.6 192
NP_956523.1 cops8 gene product D. rerio 77.5 190
Other hits (2 of 26) [Show all]SpeciesId(%)Len(aa)
XP_001090380.2 PREDICTED: COP9 signalosome complex subunit 8-like M. mulatta 98.8 159
XP_003908179.1 PREDICTED: COP9 signalosome complex subunit 8 P. anubis 98.6 208

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: embryonic tissue; brain; fertilized ovum; mixed; mammary gland; thymus; ovary; lung; heart; eye; extraembryonic tissue; bone marrow; prostate; thyroid; lymph node; muscle; kidney; intestine; skin; liver; pancreas; uncharacterized tissue; testis; bladder; connective tissue; pituitary gland; bone; sympathetic ganglion; spinal cord; spleen; dorsal root ganglion; inner ear; joint; blood; adipose tissue; salivary gland; nasopharynx; epididymis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1 D|1
UniSTS entry: Chr 1 RH124689
UniSTS entry: Chr 1 RH125786
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (26)

AK090013.1 Mus musculus RCB-0464 Meth-A cDNA, RIKEN full-length enriched library, clone:G430060A12 product:HCOP9 (COP9 HOMOLOG) homolog [Homo sapiens], full insert sequence P
AK088323.1 Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430012L23 product:HCOP9 (COP9 HOMOLOG) homolog [Homo sapiens], full insert sequence P
AK079522.1 Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230004N08 product:HCOP9 (COP9 HOMOLOG) homolog [Homo sapiens], full insert sequence P
AK079111.1 Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430009J09 product:HCOP9 (COP9 HOMOLOG) homolog [Homo sapiens], full insert sequence P
AK219864.1 Mus musculus cDNA, clone:Y2G0149O15, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search
AK218596.1 Mus musculus cDNA, clone:Y2G0145K24, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search
AK215402.1 Mus musculus cDNA, clone:Y2G0134O09, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search
AK215258.1 Mus musculus cDNA, clone:Y2G0134H10, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search
AK214410.1 Mus musculus cDNA, clone:Y2G0131L01, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search
AK212344.1 Mus musculus cDNA, clone:Y2G0124K05, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search
AK207412.1 Mus musculus cDNA, clone:Y2G0107O17, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search
AK195692.1 Mus musculus cDNA, clone:Y1G0119F07, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search P
AK188500.1 Mus musculus cDNA, clone:Y0G0145H07, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search P
AK187619.1 Mus musculus cDNA, clone:Y0G0142H14, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search
AK187036.1 Mus musculus cDNA, clone:Y0G0139J18, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search
AK186685.1 Mus musculus cDNA, clone:Y0G0138F08, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search
AK186045.1 Mus musculus cDNA, clone:Y0G0136B10, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search
AK185916.1 Mus musculus cDNA, clone:Y0G0135K16, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search
AK182576.1 Mus musculus cDNA, clone:Y0G0123B02, strand:minus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000036153, based on BLAT search
AK145899.1 Mus musculus 13 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530012K24 product:COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana), full insert sequence P
AK162502.1 Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530033H04 product:COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana), full insert sequence P
BC017690.1 Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana), mRNA (cDNA clone MGC:19354 IMAGE:4238947), complete cds PA
BC021488.1 Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana), mRNA (cDNA clone MGC:36612 IMAGE:5344864), complete cds PA
NM_133805.3 Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana) (Cops8), mRNA P
AF482000.1 Mus musculus COP9 signalosome subunit 8 (Csn8) mRNA, complete cds P
BC024421.1 Mus musculus COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana), mRNA (cDNA clone MGC:36568 IMAGE:4987584), complete cds PA

EST sequences (10 of 544) [Show all sequences]

CA577955.1 Clone NIA:K0716F09_IMAGE:30075140 bone marrow 5' read P
CA578051.1 Clone NIA:K0717H05_IMAGE:30075256 bone marrow 5' read P
BY003884.1 Clone E530117P04 brain 5' read P
BY010958.1 Clone G730023D16 lung 5' read P
BY017940.1 Clone G830025I23 mammary gland 5' read P
BY038085.1 Clone I730003O22 thymus 5' read P
BY054139.1 Clone I730076K22 thymus 5' read P
BY061687.1 Clone I920018K06 heart 5' read P
BY085213.1 Clone K630051M02 embryonic tissue 5' read P
BY089560.1 Clone K630076G20 intestine 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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