Endo-beta-1,4-D-glucanase (Cel8)

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UGID:252053 UniGene Les.68 Solanum lycopersicum (tomato) Cel8

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Endo-beta-1,4-D-glucanase (Cel8)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_002270880.1	PREDICTED: hypothetical protein	V. vinifera	84.0	612
NP_176621.1	ATGH9C2 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9C2); hydrolase, hydrolyzing O-glycosyl compounds	A. thaliana	81.8	610

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	fruit; leaf; whole plant; flower; seed; root; mixed; cell culture

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

BT013727.1	Lycopersicon esculentum clone 132586R, mRNA sequence	PA
AK326663.1	Solanum lycopersicum cDNA, clone: LEFL2011G12, HTC in fruit	PA
AF098292.1	Lycopersicon esculentum endo-beta-1,4-D-glucanase (Cel8) mRNA, complete cds	PA

EST sequences (10 of 30) [Show all sequences]

CK720555.1	Clone LEECI01C03	root		P
BP876497.1	Clone FA05AC11	fruit	5' read	P
BP882791.1	Clone FA24AA07	fruit	5' read	P
BP887140.1	Clone FA36CA02	fruit	5' read	P
BP888638.1	Clone FA54CA11	fruit	5' read	P
BP901062.1	Clone LA24DA11	leaf	5' read	P
BP902206.1	Clone LA28AH02	leaf	5' read	P
BP908726.1	Clone LC13AH01	leaf	5' read	P
DB679340.1	Clone LEFL1003DH01	leaf	5' read	P
DB711950.1	Clone LEFL2009L08	fruit	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria