NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs

UGID:543762     UniGene Les.4270     Solanum lycopersicum (tomato)   CAT2
Catalase 2 (CAT2)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
XP_002270703.1 PREDICTED: hypothetical protein isoform 1 V. vinifera 93.1 491
NP_195235.1 CAT2 (CATALASE 2); catalase A. thaliana 92.9 491
XP_001696763.1 catalase/peroxidase C. reinhardtii 82.9 490
NP_001022473.1 CaTaLase family member (ctl-2) C. elegans 55.2 429
NP_001743.1 catalase H. sapiens 55.2 382
NP_033934.2 catalase M. musculus 55.0 382
NP_570987.1 catalase D. rerio 55.0 382
NP_001098738.1 hypothetical protein LOC100125664 X. laevis 53.6 455
XP_324526.1 hypothetical protein N. crassa 47.9 484
NP_609248.1 CG9314 D. melanogaster 47.9 474
NP_010542.1 Catalase A, breaks down hydrogen peroxide in the peroxisomal matrix formed by acyl-CoA oxidase (Pox1p) during fatty acid beta-oxidation; Cta1p S. cerevisiae 47.3 438

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: leaf; flower; root; mixed; trichome; callus; fruit; cell culture
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

BT012965.1 Lycopersicon esculentum clone 114156F, mRNA sequence PA
AK321992.1 Solanum lycopersicum cDNA, clone: LEFL1032AE03, HTC in leaf PA
AF112368.1 Lycopersicon esculentum catalase 2 mRNA, complete cds PA

EST sequences (10 of 95) [Show all sequences]

BP884391.1 Clone FA28CB12 fruit 5' read P
BP896162.1 Clone LA05CC08 leaf 5' read P
BP897337.1 Clone LA13AH05 leaf 5' read P
BP899111.1 Clone LA18CF12 leaf 5' read P
BP899249.1 Clone LA19AD12 leaf 5' read P
BP899901.1 Clone LA21AH10 leaf 5' read P
BP900985.1 Clone LA24CB08 leaf 5' read P
BP903460.1 Clone LB03DD01 leaf 5' read P
BP903946.1 Clone LB10BB02 leaf 5' read P
BP905440.1 Clone LB14AH12 leaf 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help