Peptide deformylase-like protein (LOC543648)

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UGID:255426 UniGene Les.3729 Solanum lycopersicum (tomato) LOC543648

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Peptide deformylase-like protein (LOC543648)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_002300047.1	peptide deformylase	P. trichocarpa	76.4	224
NP_196970.1	PDF1B (PEPTIDE DEFORMYLASE 1B); peptide deformylase	A. thaliana	70.3	259
XP_001690137.1	peptide deformylase	C. reinhardtii	48.0	202

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	cDNA Sources:	fruit; leaf; flower; stem

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	AK319475.1	Solanum lycopersicum cDNA, clone: LEFL1005CA07, HTC in leaf	A
	AF250958.1	Lycopersicon esculentum peptide deformylase-like protein mRNA, complete cds	P

EST sequences (10 of 25) [Show all sequences]

CD002459.1	Clone LePU0487	fruit		P
CD003311.1	Clone LePU1439	fruit
BP885621.1	Clone FA32AH12	fruit	5' read	P
BW688645.1	Clone FC12DA04	fruit	5' read	P
DB679860.1	Clone LEFL1005CA07	leaf	5' read	P
DB688192.1	Clone LEFL1032BA06	leaf	5' read	P
DB701037.1	Clone LEFL1072CB06	leaf	5' read	P
DB713052.1	Clone LEFL2012P11	fruit	5' read	P
DB713246.1	Clone LEFL2013I07	fruit	5' read	P
DB714369.1	Clone LEFL2017A11	fruit	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria