Catalase (cat1)

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UGID:254825 UniGene Les.3098 Solanum lycopersicum (tomato) cat1

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Catalase (cat1)

SELECTED PROTEIN SIMILARITIES

Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.

Reference Protein		Species	Id(%)	Len(aa)
XP_002270703.1	PREDICTED: hypothetical protein isoform 1	V. vinifera	86.0	491
NP_195235.1	CAT2 (CATALASE 2); catalase	A. thaliana	85.0	491
XP_001696763.1	catalase/peroxidase	C. reinhardtii	78.2	487
NP_570987.1	catalase	D. rerio	55.4	386
NP_001743.1	catalase	H. sapiens	55.4	390
NP_496979.2	CaTaLase family member (ctl-1)	C. elegans	54.5	492
NP_033934.2	catalase	M. musculus	54.3	429
NP_001098738.1	hypothetical protein LOC100125664	X. laevis	53.0	460
NP_609248.1	CG9314	D. melanogaster	50.9	472
XP_324526.1	hypothetical protein	N. crassa	50.1	399
NP_010542.1	Catalase A, breaks down hydrogen peroxide in the peroxisomal matrix formed by acyl-CoA oxidase (Pox1p) during fatty acid beta-oxidation; Cta1p	S. cerevisiae	49.3	373

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	fruit; callus; leaf; stem; flower; cell culture; root; whole plant; mixed; seed; floral bud; trichome

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	AK320529.1	Solanum lycopersicum cDNA, clone: LEFL1010BE07, HTC in leaf	PA
	M93719.1	Lycopersicon esculentum catalase (cat1) mRNA, complete cds	P

EST sequences (10 of 488) [Show all sequences]

CB214957.1		fruit
CK715202.1	Clone LECAD02N20	whole plant		P
CK715028.1	Clone LECAD02F13	whole plant		P
CK720564.1	Clone LEECI01D06	root		P
BP876069.1	Clone FA03CD02	fruit	5' read	P
BP877627.1	Clone FA08DG11	fruit	5' read	P
BP877841.1	Clone FA09DD12	fruit	5' read	P
BP877949.1	Clone FA10BC04	fruit	5' read	P
BP877962.1	Clone FA10BD06	fruit	5' read	P
BP878412.1	Clone FA11CG11	fruit	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria