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UGID:142106     UniGene Hs.97726     Homo sapiens (human)   SPATC1
Spermatogenesis and centriole associated 1 (SPATC1)

Human protein-coding gene SPATC1. Represented by 32 ESTs from 7 cDNA libraries. EST representation biased toward testis; normal. Corresponds to 2 reference sequences (different isoforms). [UniGene 142106 - Hs.97726]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_940974.2 SPATC1 gene product H. sapiens 100.0 590
NP_083128.1 speriolin M. musculus 67.7 479
Other hits (2 of 13) [Show all]SpeciesId(%)Len(aa)
XP_003951427.1 PREDICTED: LOW QUALITY PROTEIN: speriolin P. troglodytes 95.4 563
XP_003918786.1 PREDICTED: speriolin P. anubis 93.1 590

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: testis [show more like this]
normal [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; mixed; brain
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8q24.3
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BC050390.1 Homo sapiens spermatogenesis and centriole associated 1, mRNA (cDNA clone MGC:51970 IMAGE:5742710), complete cds PA
BC053547.1 Homo sapiens spermatogenesis and centriole associated 1, mRNA (cDNA clone MGC:61633 IMAGE:5743874), complete cds PA
NM_198572.2 Homo sapiens spermatogenesis and centriole associated 1 (SPATC1), transcript variant 1, mRNA PA
AB092352.1 Homo sapiens SPATC1 mRNA for spermatogenesis and centriole associated 1, complete cds PA
AK301710.1 Homo sapiens cDNA FLJ60188 complete cds, highly similar to Homo sapiens spermatogenesis and centriole associated 1 (SPATC1), mRNA PA
NM_001134374.1 Homo sapiens spermatogenesis and centriole associated 1 (SPATC1), transcript variant 2, mRNA PA

EST sequences (32)

AA905913.1 Clone IMAGE:1505379 mixed 3' read A
AI004293.1 Clone IMAGE:1626005 mixed 3' read P
AI026805.1 Clone IMAGE:1645311 testis 3' read PA
BX119104.1 Clone IMAGp998G231824_;_IMAGE:742702 testis PA
AI674112.1 Clone IMAGE:2328496 mixed 3' read PA
DB028189.1 Clone TESTI2010998 testis 5' read P
DB043565.1 Clone TESTI2031310 testis 5' read P
DB037162.1 Clone TESTI2023092 testis 5' read P
DB037218.1 Clone TESTI2023165 testis 5' read P
DB044862.1 Clone TESTI2032928 testis 5' read P
DB020273.1 Clone TESTI2000403 testis 5' read P
DB027294.1 Clone TESTI2009748 testis 5' read P
DB335785.1 Clone TESTI2000403 testis 3' read PA
DB052161.1 Clone TESTI2042274 testis 5' read P
DB052198.1 Clone TESTI2042319 testis 5' read P
EL737131.1 mixed 5' read P
BG720852.1 Clone IMAGE:4824213 testis 5' read P
BI520067.1 Clone IMAGE:5163285 brain 5' read P
BM552885.1 Clone IMAGE:5742710 brain 5' read P
BM563215.1 Clone IMAGE:5743874 brain 5' read P
HY003575.1 Clone H04D012M24 testis P
HY025957.1 Clone H04D088K21 testis P
HY035146.1 Clone H04D121F18 testis P
HY043557.1 Clone H04D153F15 testis P
HY045291.1 Clone H04D158L13 testis P
HY187109.1 Clone H04D012M24 testis P
HY209773.1 Clone H04D088K21 testis P
HY220046.1 Clone H04D121F18 testis P
HY231636.1 Clone H04D158L13 testis P
AA401380.1 Clone IMAGE:742702 testis 3' read PA
AA400090.1 Clone IMAGE:742702 testis 5' read P
AA400693.1 Clone IMAGE:743374 testis 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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