> Zinc finger, matrin-type 5 (ZMAT5)
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UGID:3355087     UniGene Hs.713647     Homo sapiens (human)   ZMAT5 Order cDNA clone, Links
Zinc finger, matrin-type 5 (ZMAT5)

Human protein-coding gene ZMAT5. Represented by 148 ESTs from 84 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 3355087 - Hs.713647]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001106557.1 PREDICTED: zinc finger matrin-type protein 5-like M. mulatta 100.0 169
XP_003905448.1 PREDICTED: zinc finger matrin-type protein 5 isoform 1 P. anubis 100.0 169
XP_001136635.2 PREDICTED: zinc finger matrin-type protein 5 isoform 1 P. troglodytes 100.0 169
NP_001003692.1 ZMAT5 gene product H. sapiens 100.0 169
NP_080291.1 Zmat5 gene product M. musculus 97.1 169
NP_001087334.2 zinc finger, matrin-type 5 X. laevis 63.6 164
NP_001003771.1 zmat5 gene product D. rerio 61.3 172
NP_193070.1 leucine-rich repeat extensin-like protein 3 A. thaliana 49.3 152
XP_001695130.1 cell wall protein pherophorin-C10 C. reinhardtii 48.8 160
Other hits (2 of 25) [Show all]SpeciesId(%)Len(aa)
XP_001915983.1 PREDICTED: LOW QUALITY PROTEIN: zinc finger matrin-type protein 5-like E. caballus 98.2 169
XP_001929045.1 PREDICTED: zinc finger matrin-type protein 5 isoform 1 S. scrofa 97.1 169

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; eye; thymus; mixed; pancreas; prostate; intestine; placenta; skin; liver; uterus; heart; uncharacterized tissue; embryonic tissue; kidney; ovary; connective tissue; thyroid; lymph node; tonsil; bladder; muscle; bronchus; bone; mammary gland; blood; salivary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22cen-q12.3
UniSTS entry: Chr 22 RH45735
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AL160311.1 Novel human gene mapping to chomosome 22 P
CR456353.1 Homo sapiens Em:AC005529.5 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.Em:AC005529.5.V2) P
CR457393.1 Homo sapiens full open reading frame cDNA clone RZPDo834F0710D for gene LOC55954, hypothetical protein LOC55954; complete cds, incl. stopcodon P
NM_001003692.1 Homo sapiens zinc finger, matrin-type 5 (ZMAT5), transcript variant 2, mRNA PA
NM_019103.2 Homo sapiens zinc finger, matrin-type 5 (ZMAT5), transcript variant 1, mRNA PA
BC009717.1 Homo sapiens zinc finger, matrin type 5, mRNA (cDNA clone MGC:9510 IMAGE:3890730), complete cds PA
AK292671.1 Homo sapiens cDNA FLJ75820 complete cds, highly similar to Homo sapiens zinc finger, matrin type 5 (ZMAT5), transcript variant 2, mRNA P

EST sequences (148)

AI039599.1 Clone IMAGE:1664643 skin 3' read
AI129831.1 Clone IMAGE:1712981 uterus 3' read
AI139242.1 Clone IMAGE:1710077 heart 3' read
CB050034.1 Clone IMAGE:3271817 prostate 3' read A
CB050035.1 Clone IMAGE:3271817 prostate 5' read P
AI151191.1 Clone IMAGE:1715261 placenta 3' read
BX103763.1 Clone IMAGp998N17567_;_IMAGE:260176 placenta P
AI193042.1 Clone IMAGE:1744229 lung 3' read
AI083923.1 Clone IMAGE:1751156 brain 3' read
CB159775.1 Clone L18POOL1n1-26-G12 liver 5' read P
CB160060.1 Clone L18POOL1n1-47-C04 liver 5' read P
AI362709.1 Clone IMAGE:2017366 brain 3' read A
AI376982.1 Clone IMAGE:2066533 embryonic tissue 3' read
AI393350.1 Clone IMAGE:2111638 mixed 3' read A
AI478175.1 Clone IMAGE:2161526 kidney 3' read P
AI480200.1 Clone IMAGE:2163680 brain 3' read P
AI653394.1 Clone IMAGE:2308652 uncharacterized tissue 3' read
AI702114.1 Clone IMAGE:2339793 lung 3' read
AI708019.1 Clone IMAGE:2335747 intestine 3' read
R58358.1 Clone G3143 heart 5' read
AI768632.1 Clone IMAGE:2381670 kidney 3' read
CB321679.1 Clone UI-CF-EN1-aeg-n-12-0-UI lung 3' read PA
AI819180.1 Clone IMAGE:2404517 kidney 3' read P
AI885340.1 Clone IMAGE:2432396 brain 3' read P
BX447470.2 Clone CS0CAP003YC12 thymus 5' read
BX447315.2 Clone CS0CAP003YC12 thymus 5' read
BX456653.2 Clone CS0CAP003YC12 thymus 5' read
AW007574.1 Clone IMAGE:2506297 intestine 3' read
AW138590.1 Clone IMAGE:2715602 mixed 3' read A
AW139726.1 Clone IMAGE:2718669 mixed 3' read A
AW167216.1 Clone IMAGE:2633881 uterus 3' read A
AW205621.1 Clone IMAGE:2722625 mixed 3' read A
AW206329.1 Clone IMAGE:2722148 mixed 3' read A
AW466900.1 Clone IMAGE:2872724 kidney 3' read
AW510830.1 Clone IMAGE:2911974 mixed 3' read
CK430232.1 Clone oj46g07 eye 5' read
CK822209.1 Clone IMAGE:5597592 pancreas 3' read P
CK822210.1 Clone IMAGE:5597592 pancreas 5' read P
AW881149.1 ovary
AW958281.1 uncharacterized tissue P
CN428466.1 embryonic tissue 5' read P
CN428467.1 embryonic tissue 5' read P
CN428468.1 embryonic tissue 5' read P
CV025417.1 mixed 5' read P
BP363904.1 Clone TIR02745 lung 5' read P
BP333435.1 Clone SLV02753 salivary gland 5' read
BE670658.1 Clone IMAGE:3284706 lung 3' read
BE673040.1 Clone IMAGE:3220723 uncharacterized tissue 3' read
BE745382.1 Clone IMAGE:3926979 ovary 5' read P
R86228.1 Clone IMAGE:194493 mixed 5' read P
BE778954.1 Clone IMAGE:3868552 eye 5' read P
BE876711.1 Clone IMAGE:3890730 lung 5' read P
DN995779.1 Clone TC113249 mammary gland 5' read P
BE857497.1 Clone IMAGE:3305063 brain 3' read P
BP418086.1 Clone HIE01160r intestine 3' read
BF115746.1 Clone IMAGE:3569288 lung 3' read P
BF115756.1 Clone IMAGE:3569336 lung 3' read P
BF664282.1 Clone IMAGE:4309587 tonsil 5' read P
DA173177.1 Clone BRAMY2035923 brain 5' read
H68548.1 Clone IMAGE:229663 mixed 3' read
BF064062.1 Clone IMAGE:3323536 intestine 3' read P
BF433934.1 Clone IMAGE:3702391 lung 3' read P
DR978354.1 Clone ID_11986 brain 3' read A
BF591682.1 Clone IMAGE:3568554 lung 3' read P
DB162563.1 Clone THYMU3043544 thymus 5' read P
DB137516.1 Clone THYMU3009335 thymus 5' read P
DB137569.1 Clone THYMU3009398 thymus 5' read P
H55373.1 Clone C22_394 uncharacterized tissue 5' read
H55637.1 Clone C22_782 uncharacterized tissue 5' read
BF967266.1 Clone IMAGE:4375030 brain 5' read P
BF935270.1 brain P
N23135.1 Clone IMAGE:266851 skin 3' read A
DB501335.1 Clone H033080A16 brain 5' read P
DB572531.1 Clone H033080A16 brain 3' read
DB563782.1 Clone H033048G18 brain 3' read
DB491225.1 Clone H033038N20 brain 5' read
DB492718.1 Clone H033048G18 brain 5' read P
DB493264.1 Clone H033050P08 brain 5' read P
DB493589.1 Clone H033052C05 brain 5' read P
DB564661.1 Clone H033052C05 brain 3' read
N28752.1 Clone IMAGE:266851 skin 5' read P
N29368.1 Clone IMAGE:260176 placenta 3' read
N29603.1 Clone IMAGE:257268 placenta 3' read
BG285784.1 Clone IMAGE:4498692 bladder 5' read P
N41603.1 Clone IMAGE:257268 placenta 5' read P
DT217179.1 brain P
DT220375.1 brain P
N47916.1 Clone IMAGE:260176 placenta 5' read P
BG202491.1 connective tissue P
BI044679.1 ovary A
BG995987.1 thyroid A
BI468452.1 Clone IMAGE:5022870 pancreas 5' read P
BI915248.1 Clone IMAGE:5248628 brain 5' read P
BI916493.1 Clone IMAGE:5246837 brain 5' read P
BM014591.1 Clone IMAGE:5416535 mammary gland 5' read P
W15398.1 Clone IMAGE:301165 lung 5' read
BM312806.1 pancreas 3' read P
BM313092.1 pancreas 5' read P
BM545459.1 Clone IMAGE:5729621 brain 5' read A
BM547909.1 Clone IMAGE:5732663 brain 5' read P
BM684026.1 Clone UI-E-EJ1-ajk-l-08-0-UI eye 3' read PA
BM692547.1 Clone UI-E-CL1-afd-l-24-0-UI eye 5' read P
BM800651.1 Clone IMAGE:5535184 uterus 5' read P
W65481.1 Clone IMAGE:342469 heart 3' read
W65432.1 Clone IMAGE:342469 heart 5' read P
BM842072.1 Clone S12SNU216-56-A04 lymph node 5' read P
AL701570.1 Clone DKFZp686A21145 muscle 5' read P
BQ012495.1 Clone UI-1-BC1p-ass-e-06-0-UI placenta 3' read A
BQ013228.1 Clone UI-1-BC1p-ayt-f-11-0-UI placenta 3' read PA
BQ184749.1 Clone UI-E-EJ1-ajn-f-15-0-UI eye 3' read PA
BQ186218.1 Clone UI-E-EJ1-ajn-f-15-0-UI eye 5' read P
BQ638689.1 Clone hd26e02 eye 5' read P
BQ647731.1 Clone IMAGE:6297536 liver 5' read P
BQ648775.1 Clone IMAGE:6283407 liver 5' read P
BQ650121.1 Clone IMAGE:6269922 liver 5' read P
BQ652103.1 Clone IMAGE:6272064 liver 5' read PA
AA035687.1 Clone IMAGE:360014 heart 5' read P
BG121528.1 Clone IMAGE:4450865 liver 5' read P
BM931572.1 Clone UI-E-EJ1-ajk-l-08-0-UI eye 5' read PA
BQ931527.1 Clone IMAGE:6375478 eye 5' read PA
BU156529.1 Clone IMAGE:6172138 eye 5' read P
BU190596.1 Clone IMAGE:6011611 lung 5' read P
C02896.1 Clone 3NHC0507 heart
C04743.1 Clone 3NHC3924 heart
C05225.1 Clone 3NHC5048 heart
BU584486.1 Clone 4661689 bronchus 5' read
BU596350.1 Clone IMAGE:6452859 mixed 5' read P
BU598307.1 Clone IMAGE:6457110 mixed 5' read P
BU599029.1 Clone IMAGE:6458000 mixed 5' read P
BU628204.1 Clone UI-H-FG0-bde-i-22-0-UI bone 3' read PA
BU622791.1 Clone UI-H-FG1-bgf-i-02-0-UI bone 3' read PA
BU625827.1 Clone UI-H-FG1-bgp-a-03-0-UI bone 3' read A
BU687650.1 Clone UI-CF-EC1-adu-g-18-0-UI lung 3' read PA
BU733049.1 Clone UI-E-CL1-afd-l-24-0-UI eye 3' read A
BU839565.1 Clone IMAGE:6285728 liver 5' read P
BU941559.1 Clone IMAGE:6713819 mixed 5' read P
CA306766.1 Clone UI-H-FT1-bht-j-11-0-UI lung 3' read PA
CA434379.1 Clone UI-H-DH0-arx-a-16-0-UI connective tissue 3' read PA
AA297342.1 brain 5' read
AA310713.1 blood 5' read P
AA312132.1 blood 5' read P
AA378133.1 connective tissue 5' read P
CA944667.1 Clone UI-CF-FN0-afr-e-20-0-UI lung 3' read A
AA460665.1 Clone IMAGE:796236 embryonic tissue 3' read A
AA461013.1 Clone IMAGE:796236 embryonic tissue 5' read
AA649217.1 Clone IMAGE:1185247 lymph node 3' read A
AA649306.1 Clone IMAGE:1185269 lymph node 3' read A
AA934585.1 Clone IMAGE:1571251 uncharacterized tissue 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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