> HOXB cluster antisense RNA 3 (HOXB-AS3)
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UGID:2729406     UniGene Hs.660088     Homo sapiens (human)   HOXB-AS3 Order cDNA clone, Links
HOXB cluster antisense RNA 3 (HOXB-AS3)

Human miscRNA gene HOXB-AS3. Represented by 72 ESTs from 29 cDNA libraries. Corresponds to 5 reference sequences (different isoforms). [UniGene 2729406 - Hs.660088]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003912731.1 PREDICTED: uncharacterized protein LOC101013179 P. anubis 88.3 102

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: connective tissue; mammary gland; kidney; intestine; mixed; pancreas; testis; prostate; uncharacterized tissue; parathyroid; lung; stomach; uterus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q21.32
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BC010732.1 Homo sapiens hypothetical LOC404266, mRNA (cDNA clone MGC:10077 IMAGE:3896690), complete cds A
NR_033204.1 Homo sapiens HOXB cluster antisense RNA 3 (HOXB-AS3), transcript variant 4, non-coding RNA A
NR_033202.1 Homo sapiens HOXB cluster antisense RNA 3 (HOXB-AS3), transcript variant 2, non-coding RNA A
NR_033205.1 Homo sapiens HOXB cluster antisense RNA 3 (HOXB-AS3), non-coding RNA PA
NR_033203.1 Homo sapiens HOXB cluster antisense RNA 3 (HOXB-AS3), transcript variant 3, non-coding RNA A
NR_033201.1 Homo sapiens HOXB cluster antisense RNA 3 (HOXB-AS3), transcript variant 1, non-coding RNA A

EST sequences (72)

AI034405.1 Clone IMAGE:1647151 parathyroid 3' read A
AI088143.1 Clone IMAGE:1683129 parathyroid 3' read
AI089087.1 Clone IMAGE:1634260 mixed 3' read A
AI125255.1 Clone IMAGE:1736513 testis 3' read A
AI125836.1 Clone IMAGE:1737331 testis 3' read
CB046508.1 Clone IMAGE:3252744 kidney 3' read A
CB046509.1 Clone IMAGE:3252744 kidney 5' read A
BX110067.1 Clone IMAGp998N035581_;_IMAGE:2255042 prostate
AI220200.1 Clone IMAGE:1841910 mixed 3' read
AI244844.1 Clone IMAGE:1866992 kidney 3' read A
AI335246.1 Clone IMAGE:2055782 kidney 3' read A
AI623194.1 Clone IMAGE:2237379 uncharacterized tissue 3' read A
AI669532.1 Clone IMAGE:2312799 prostate 3' read A
AI684852.1 Clone IMAGE:2303051 mixed 3' read
AI685673.1 Clone IMAGE:2248758 prostate 3' read A
AI743312.1 Clone IMAGE:2372464 mixed 3' read A
AI743313.1 Clone IMAGE:2372466 mixed 3' read A
AI763333.1 Clone IMAGE:2394146 intestine 3' read A
AI765957.1 Clone IMAGE:2386031 kidney 3' read
AI866933.1 Clone IMAGE:2445303 stomach 3' read A
AI915661.1 Clone IMAGE:2370809 mixed 3' read A
AI868994.1 Clone IMAGE:2313087 prostate 3' read A
AI949711.1 Clone IMAGE:2461436 kidney 3' read A
AW025831.1 Clone IMAGE:2516371 uncharacterized tissue 3' read A
CF127739.1 Clone IMAGE:30554455 lung 5' read
AW242766.1 Clone IMAGE:2691398 kidney 3' read
AW268484.1 Clone IMAGE:2815632 mixed 3' read A
AW291017.1 Clone IMAGE:2724611 uncharacterized tissue 3' read A
AW966747.1 uncharacterized tissue
BE062042.1 mammary gland
CV023211.1 mixed 5' read
BE552174.1 Clone IMAGE:3184485 kidney 3' read
BE904259.1 Clone IMAGE:3896690 pancreas 5' read
BF062611.1 Clone IMAGE:3320575 intestine 3' read A
BF431268.1 Clone IMAGE:3573671 kidney 3' read
DA741273.1 Clone NT2RP7003980 testis 5' read
BF590528.1 Clone IMAGE:3318115 intestine 3' read
DB338378.1 Clone TESTI2037406 testis 3' read A
BF815590.1 intestine
BF816975.1 intestine
BF816985.1 intestine
BG186859.1 connective tissue A
BG187736.1 connective tissue
BG192314.1 connective tissue
BG193393.1 connective tissue P
BG195671.1 connective tissue A
BG196428.1 connective tissue
BG196429.1 connective tissue A
BG198429.1 connective tissue A
BG200026.1 connective tissue
BG201033.1 connective tissue
BG203123.1 connective tissue P
BG203124.1 connective tissue P
BG203609.1 connective tissue P
BG204130.1 connective tissue
BG204365.1 connective tissue
BG206776.1 connective tissue P
BG216819.1 connective tissue P
BG217316.1 connective tissue
BG217847.1 connective tissue P
BG220368.1 connective tissue P
BG958244.1 intestine
BM466974.1 Clone IMAGE:5572889 intestine 5' read
W39335.1 Clone IMAGE:322663 parathyroid 5' read
BM994156.1 Clone IMAGE:5865610 connective tissue 3' read A
BQ321638.1 intestine
HY208768.1 Clone H04D085K14 testis
AA299267.1 uterus 5' read
AA373596.1 lung 5' read
AA373970.1 lung 5' read
AA568219.1 Clone IMAGE:1057794 intestine 3' read
AA936427.1 Clone IMAGE:1561540 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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