> Musashi RNA-binding protein 2 (MSI2)
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UGID:2728240     UniGene Hs.658922     Homo sapiens (human)   MSI2 Order cDNA clone, Links
Musashi RNA-binding protein 2 (MSI2)

Human protein-coding gene MSI2. Represented by 183 ESTs from 109 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2728240 - Hs.658922]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_473384.1 Msi2 gene product M. musculus 100.0 345
NP_620412.1 MSI2 gene product H. sapiens 100.0 327
XP_002719144.1 PREDICTED: musashi 2-like O. cuniculus 100.0 305
XP_001081205.3 PREDICTED: RNA-binding protein Musashi homolog 2-like R. norvegicus 100.0 293
XP_003315679.1 PREDICTED: uncharacterized protein LOC748578 P. troglodytes 100.0 250
XP_003912844.1 PREDICTED: RNA-binding protein Musashi homolog 2 P. anubis 100.0 115
XP_532379.3 PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog 2 isoform 1 C. lupus familiaris 99.7 327
XP_001500456.2 PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog 2-like, partial E. caballus 99.7 322
NP_001084027.1 musashi homolog 2 X. laevis 92.9 405
NP_997961.1 msi2a gene product D. rerio 90.5 387
NP_730245.2 RNA-binding protein 6, isoform A D. melanogaster 76.1 326
NP_497799.1 Protein MSI-1 C. elegans 71.6 264
XP_961230.1 hypothetical protein NCU04239 N. crassa 60.0 160
NP_014518.1 Hrp1p S. cerevisiae 49.7 169
NP_180899.1 RNA recognition motif-containing protein A. thaliana 46.0 202
Other hits (2 of 51) [Show all]SpeciesId(%)Len(aa)
XP_001506312.2 PREDICTED: RNA-binding protein Musashi homolog 2-like O. anatinus 99.2 250
NP_001193585.1 RNA-binding protein Musashi homolog 2 B. taurus 99.2 353

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; uterus; prostate; kidney; mixed; eye; lymph node; placenta; mammary gland; intestine; uncharacterized tissue; thymus; mouth; esophagus; trachea; liver; lung; stomach; skin; blood; heart; pancreas; ovary; testis; larynx; bladder; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q22
UniSTS entry: Chr 17 RH78952
UniSTS entry: Chr 1 D1S1425
UniSTS entry: Chr 1 D16S325
UniSTS entry: Chr 1 G35510
UniSTS entry: Chr 1 D11S2875
UniSTS entry: Chr 17 RH91828
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

BX647939.1 Homo sapiens mRNA; cDNA DKFZp686H1624 (from clone DKFZp686H1624) A
BX647282.1 Homo sapiens mRNA; cDNA DKFZp686A0493 (from clone DKFZp686A0493) A
AK128251.1 Homo sapiens cDNA FLJ46386 fis, clone THYMU3000390
BC001526.2 Homo sapiens musashi homolog 2 (Drosophila), mRNA (cDNA clone MGC:3245 IMAGE:3505639), complete cds PA
NM_138962.2 Homo sapiens musashi RNA-binding protein 2 (MSI2), transcript variant 1, mRNA P
AK093888.1 Homo sapiens cDNA FLJ36569 fis, clone TRACH2010824, highly similar to Ribonucleoprotein P
AL833068.1 Homo sapiens mRNA; cDNA DKFZp451M2015 (from clone DKFZp451M2015) A
AK297295.1 Homo sapiens cDNA FLJ52888 complete cds, highly similar to RNA-binding protein Musashi homolog 2 P
AK295060.1 Homo sapiens cDNA FLJ56904 complete cds, highly similar to RNA-binding protein Musashi homolog 2 P
BC017560.2 Homo sapiens musashi homolog 2 (Drosophila), mRNA (cDNA clone IMAGE:3922563), complete cds PA
NM_170721.1 Homo sapiens musashi RNA-binding protein 2 (MSI2), transcript variant 2, mRNA PA

EST sequences (183)

CB046650.1 Clone IMAGE:3253086 kidney 5' read
BX114190.1 Clone IMAGp998N09516_;_IMAGE:240584 mixed
BX119204.1 Clone IMAGp998E194781_;_IMAGE:1947642 uncharacterized tissue P
CB158391.1 Clone L18POOL1n1-31-E11 liver 5' read
CB160250.1 Clone L18POOL1n1-52-E06 liver 5' read
AI300846.1 Clone IMAGE:1900445 kidney 3' read A
AI309570.1 Clone IMAGE:2055730 kidney 3' read
AI369752.1 Clone IMAGE:2017574 brain 3' read A
AI446696.1 Clone IMAGE:2140016 stomach 3' read P
AI473254.1 Clone IMAGE:2122391 kidney 3' read A
AI498100.1 Clone IMAGE:2163072 brain 3' read A
AI572440.1 Clone IMAGE:2165058 brain 3' read A
AI399898.1 Clone IMAGE:2114005 mixed 3' read
AI650679.1 Clone IMAGE:2306705 uncharacterized tissue 3' read A
AI686063.1 Clone IMAGE:2248961 prostate 3' read PA
AI798817.1 Clone IMAGE:2348634 mixed 3' read A
AI802948.1 Clone IMAGE:2145714 mixed 3' read
AI803606.1 Clone IMAGE:2064306 mixed 3' read
BX282070.1 Clone IMAGp998P0113505_;_IMAGE:6158448 skin P
AI933313.1 Clone IMAGE:2466718 brain 3' read A
BX437574.2 Clone CS0CAP007YF03 thymus 5' read P
AF034182.1 Clone 2.3B8 uncharacterized tissue
AI971282.1 Clone IMAGE:2488917 prostate 3' read P
AW027784.1 Clone IMAGE:2530487 kidney 3' read PA
AW054806.1 Clone IMAGE:2501554 brain 3' read P
AI207633.1 liver PA
BX642669.1 Clone DKFZp781B0216 uncharacterized tissue 5' read
AW250196.1 Clone IMAGE:2822309 lung 3' read A
AW270384.1 Clone IMAGE:2746107 ovary 3' read
AW502695.1 Clone IMAGE:3076097 lymph node 5' read P
CD636577.1 uncharacterized tissue P
CD636578.1 uncharacterized tissue P
AW805112.1 uterus
AW856237.1 intestine
AW864084.1 stomach
AW864154.1 stomach
AW864164.1 stomach
AW896090.1 brain
AW903305.1 brain
CN274644.1 embryonic tissue 5' read P
AW960441.1 uncharacterized tissue
AW969154.1 uncharacterized tissue
BE000929.1 mammary gland
CV027635.1 mixed 5' read P
CR739002.1 Clone IMAGp998F015342_;_IMAGE:2163072 brain 5' read P
BE278791.1 Clone IMAGE:3505639 placenta 5' read P
BE327252.1 Clone IMAGE:3182417 lung 3' read
CV572132.1 Clone od21d01 eye 5' read PA
BE503015.1 Clone IMAGE:3214475 lung 3' read
CV803181.1 Clone IMAGE:7505446 embryonic tissue 5' read P
BE674916.1 Clone IMAGE:3293102 uncharacterized tissue 3' read
CX758846.1 Clone IMAGE:7773940 embryonic tissue 3' read P
BE778504.1 Clone IMAGE:3867355 eye 5' read P
BE778519.1 Clone IMAGE:3869089 eye 5' read P
BE779796.1 Clone IMAGE:3868796 eye 5' read P
BE796433.1 Clone IMAGE:3945906 lung 5' read
BE836557.1 prostate
BE836562.1 prostate
BE840767.1 stomach
DR001533.1 Clone TC103488 brain 5' read P
BE894256.1 Clone IMAGE:3922563 skin 5' read
BE939700.1 uterus
BF029215.1 Clone IMAGE:3997687 bladder 5' read
AV728112.1 Clone HTCBID09 brain 5' read
BF091631.1 testis
CR996313.1 Clone RZPDp9017P029 uncharacterized tissue 5' read
BF155165.1 mammary gland
BF333115.1 mammary gland
BF366011.1 brain
BF366012.1 brain
BF366019.1 brain
AA836389.1 Clone IMAGE:1370120 lymph node A
DA162975.1 Clone BRAMY2023492 brain 5' read P
BF674723.1 Clone IMAGE:4273072 prostate 5' read
BF676261.1 Clone IMAGE:4250978 prostate 5' read
DA131289.1 Clone BRALZ2002803 brain 5' read P
DA089808.1 Clone BRACE2045336 brain 5' read P
DA066244.1 Clone BRACE2015859 brain 5' read P
DA259617.1 Clone BRCAN2011414 brain 5' read P
BF855925.1 prostate P
DA655331.1 Clone MESAN2010716 kidney 5' read P
DA361298.1 Clone BRSTN2007619 brain 5' read
AW605404.1 kidney
DA454867.1 Clone CTONG2028157 mouth 5' read P
DA572432.1 Clone HEMBB1001165 mixed 5' read P
DA811998.1 Clone OVARC1000485 ovary 5' read
DB015753.1 Clone TESOP2004889 esophagus 5' read P
DA968374.1 Clone STOMA2007167 stomach 5' read P
DB016756.1 Clone TESOP2006142 esophagus 5' read P
DB297291.1 Clone BRACE2015859 brain 3' read A
DB147138.1 Clone THYMU3022657 thymus 5' read P
DB200794.1 Clone TRACH2009991 trachea 5' read
DB201322.1 Clone TRACH2010824 trachea 5' read
DB156612.1 Clone THYMU3035376 thymus 5' read P
DB346460.1 Clone THYMU3034068 thymus 3' read
DB130913.1 Clone THYMU3000390 thymus 5' read
DB348331.1 Clone TRACH2009991 trachea 3' read A
DB348356.1 Clone TRACH2010824 trachea 3' read A
DB319298.1 Clone HLUNG2002973 lung 3' read
DB359450.1 Clone HEMBB1001165 mixed 3' read A
DB143539.1 Clone THYMU3017757 thymus 5' read P
DB137564.1 Clone THYMU3009393 thymus 5' read P
BF812760.1 intestine
BF813848.1 intestine
DW428745.1 liver
DW431283.1 liver
DW431598.1 liver P
DW452791.1 liver
H90188.1 Clone IMAGE:240584 mixed 5' read
H90847.1 Clone IMAGE:240584 mixed 3' read
BF838380.1 larynx P
BG007627.1 placenta
H96971.1 Clone IMAGE:251946 skin 3' read
BF955385.1 brain
N20665.1 Clone IMAGE:264229 skin 3' read
BF884520.1 lung
BG149533.1 Clone IMAGE:3366868 lung 3' read P
EB387209.1 Clone nbj26h01 brain 5' read
N29042.1 Clone IMAGE:264229 skin 5' read
BG223546.1 Clone IMAGE:4326342 mouth P
BG282244.1 Clone IMAGE:4545170 skin 5' read P
BF172685.1 blood
BG537337.1 Clone IMAGE:4690902 lung 5' read
BI029856.1 blood
BI032746.1 brain
BI033139.1 brain
BI034212.1 brain
BG991535.1 larynx
BG953430.1 intestine
EL737187.1 mixed 5' read P
N84905.1 Clone J1517 heart 5' read
DC350824.1 Clone FCBBF3009421 brain 5' read P
DC324151.1 Clone BRAWH3037011 brain 5' read P
BI823227.1 Clone IMAGE:5180230 mixed 5' read P
BM014815.1 Clone IMAGE:5416943 mammary gland 5' read P
BM509418.1 pancreas 5' read
BM664946.1 Clone UI-E-CQ1-aey-l-07-0-UI brain 3' read A
BM672161.1 Clone UI-E-CL1-aej-d-02-0-UI eye 3' read A
BM681078.1 Clone UI-E-EJ0-ail-k-15-0-UI eye 3' read PA
BM700784.1 Clone UI-E-CL1-aej-d-02-0-UI eye 5' read
BM702269.1 Clone UI-E-CQ1-aey-l-07-0-UI brain 5' read P
BM727230.1 Clone UI-E-EJ0-aij-f-16-0-UI eye 5' read P
BM727644.1 Clone UI-E-EJ0-ail-k-15-0-UI eye 5' read P
BM760626.1 Clone S12SNU216-7-C01 lymph node 5' read
BM838476.1 Clone S12SNU216-36-H02 lymph node 5' read
BM840566.1 Clone S12SNU216-42-F10 lymph node 5' read P
BM840569.1 Clone S12SNU216-42-G02 lymph node 5' read P
BM841161.1 Clone S12SNU216-46-H06 lymph node 5' read P
BM842394.1 Clone S12SNU216-70-H04 lymph node 5' read P
BQ270569.1 Clone IMAGE:5779984 pancreas 3' read PA
BQ427484.1 Clone IMAGE:6158448 skin 5' read P
BQ431788.1 Clone IMAGE:6153023 eye 5' read P
BQ437250.1 Clone IMAGE:6152098 eye 5' read P
BQ638186.1 Clone hd19e09 eye 5' read
BF925557.1 brain
BF929115.1 brain
BQ951490.1 Clone IMAGE:6469954 uterus 5' read
W22508.1 eye
FN130904.1 Clone 198308_0368_0571
FN112149.1 Clone 150827_3429_1816
AA228139.1 Clone IMAGE:667617 mixed 5' read
BU739182.1 Clone UI-E-EJ0-ahm-d-18-0-UI eye 3' read A
BU740790.1 Clone UI-E-EJ0-aij-f-16-0-UI eye 3' read PA
BU782780.1 Clone IMAGE:6122912 pancreas 3' read
BU784022.1 Clone IMAGE:6123932 pancreas 5' read
BU786947.1 Clone IMAGE:6122689 pancreas 3' read
AA235112.1 Clone IMAGE:687289 mixed 3' read
AA235221.1 Clone IMAGE:687289 mixed 5' read
BU857812.1 Clone IMAGE:6647705 mammary gland 5' read P
BU860842.1 Clone IMAGE:6652072 mixed 5' read
BU956254.1 Clone IMAGE:6729797 mammary gland 5' read
BU956366.1 Clone IMAGE:6729954 mammary gland 5' read PA
AA249587.1 heart 5' read
HY035985.1 Clone H04D124I17 testis P
AA305490.1 intestine 5' read
AA314716.1 intestine 5' read P
AA372628.1 intestine 5' read P
AA428576.1 Clone IMAGE:781930 testis 3' read
AA429532.1 Clone IMAGE:781930 testis 5' read
AA521327.1 Clone IMAGE:826109 lymph node 3' read
AA521410.1 Clone IMAGE:826085 lymph node 3' read
AA552985.1 Clone IMAGE:1020101 nerve 3' read
AA765939.1 Clone IMAGE:1304972 lymph node 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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