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UGID:2727948     UniGene Hs.658630     Homo sapiens (human)   CCDC11
Coiled-coil domain containing 11 (CCDC11)

Human protein-coding gene CCDC11. Represented by 32 ESTs from 16 cDNA libraries. Corresponds to reference sequence NM_145020.3. [UniGene 2727948 - Hs.658630]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_659457.2 CCDC11 gene product H. sapiens 100.0 513
XP_523923.3 PREDICTED: coiled-coil domain-containing protein 11 P. troglodytes 99.8 513
NP_083224.2 Ccdc11 gene product M. musculus 72.5 513
Other hits (2 of 12) [Show all]SpeciesId(%)Len(aa)
XP_001091617.2 PREDICTED: coiled-coil domain-containing protein 11-like M. mulatta 96.5 513
XP_003914424.1 PREDICTED: coiled-coil domain-containing protein 11 P. anubis 96.5 513

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; lung; mixed; kidney; uterus; eye; uncharacterized tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 18
Map position: 18q21.1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AK057305.1 Homo sapiens cDNA FLJ32743 fis, clone TESTI2001412, weakly similar to TRICHOHYALIN PA
BC030606.2 Homo sapiens coiled-coil domain containing 11, mRNA (cDNA clone MGC:26909 IMAGE:4831081), complete cds PA
NM_145020.3 Homo sapiens coiled-coil domain containing 11 (CCDC11), mRNA PA
AK302114.1 Homo sapiens cDNA FLJ55396 complete cds, highly similar to Homo sapiens coiled-coil domain containing 11 (CCDC11), mRNA P

EST sequences (32)

AI568607.1 Clone IMAGE:2170183 brain 3' read A
AI631803.1 Clone IMAGE:2300168 kidney 3' read
BX282283.1 Clone IMAGp998E0210753_;_IMAGE:4831081 testis P
BX282742.1 Clone IMAGp998J146755_;_IMAGE:2704621 uterus P
CD359236.1 Clone IMAGE:30387948 testis 5' read P
AW242086.1 Clone IMAGE:2704621 uterus 3' read P
AW271505.1 Clone IMAGE:2769679 kidney 3' read
AW771718.1 Clone IMAGE:3006547 kidney 3' read A
CV024308.1 mixed 5' read P
H64206.1 Clone HTN-6-41 testis
DB046148.1 Clone TESTI2034608 testis 5' read P
DB020997.1 Clone TESTI2001412 testis 5' read P
DB030647.1 Clone TESTI2014315 testis 5' read P
DB030966.1 Clone TESTI2014776 testis 5' read P
DB025418.1 Clone TESTI2007241 testis 5' read P
DB032532.1 Clone TESTI2016992 testis 5' read P
DB335879.1 Clone TESTI2001412 testis 3' read P
DB525722.1 Clone H013089G12 testis 3' read P
DB460291.1 Clone H013089G12 testis 5' read P
BG718992.1 Clone IMAGE:4831081 testis 5' read P
DC397696.1 Clone TESTI2031367 testis 5' read P
BI827636.1 Clone IMAGE:5166192 brain 5' read P
BM979490.1 Clone UI-CF-DU1-adr-d-20-0-UI lung 3' read PA
AA011156.1 Clone IMAGE:360915 eye 5' read A
BF924258.1 brain P
BU677534.1 Clone UI-CF-DU1-aaq-n-11-0-UI lung 3' read PA
BU680428.1 Clone UI-CF-DU1-abf-l-12-0-UI lung 3' read PA
HY203480.1 Clone H04D068P10 testis
CA433784.1 Clone UI-H-CO0-ast-h-01-0-UI uncharacterized tissue 3' read A
AA625184.1 Clone IMAGE:1047136 mixed 5' read
AA625269.1 Clone IMAGE:1047184 mixed 5' read P
AA625499.1 Clone IMAGE:1047326 mixed 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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