> Solute carrier family 12 (potassium/chloride transporters), member 8 (SLC12A8)
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UGID:2727832     UniGene Hs.658514     Homo sapiens (human)   SLC12A8 Order cDNA clone, Links
Solute carrier family 12 (potassium/chloride transporters), member 8 (SLC12A8)

Human protein-coding gene SLC12A8. Represented by 81 ESTs from 53 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2727832 - Hs.658514]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001182412.1 SLC12A8 gene product H. sapiens 100.0 713
NP_599012.2 Slc12a8 gene product M. musculus 86.8 698
NP_001086448.1 solute carrier family 12 member 8 X. laevis 77.7 705
NP_001121749.1 solute carrier family 12 member 8 D. rerio 73.8 690
NP_569905.1 CG12773, isoform A D. melanogaster 54.0 383
NP_495469.2 Protein F10E7.9 C. elegans 47.8 253
Other hits (2 of 31) [Show all]SpeciesId(%)Len(aa)
XP_516709.4 PREDICTED: solute carrier family 12 member 8 P. troglodytes 98.9 750
XP_002802725.1 PREDICTED: solute carrier family 12 member 8-like M. mulatta 98.2 712

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; prostate; uncharacterized tissue; pharynx; mixed; liver; lung; brain; kidney; embryonic tissue; esophagus; mammary gland; testis; intestine; eye; uterus; stomach; blood; connective tissue; trachea; lymph; larynx; mouth; cervix; ovary; muscle
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3q21.2
UniSTS entry: Chr 3 RH48858
UniSTS entry: Chr 3 A009V17 [Map Viewer]
UniSTS entry: Chr 3 G32875
UniSTS entry: Chr 1 D10S16
UniSTS entry: Chr 1 GDB:335751
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

AF345197.1 Homo sapiens cation-chloride cotransporter 9 mRNA, complete cds P
BX538023.1 Homo sapiens mRNA; cDNA DKFZp686J0469 (from clone DKFZp686J0469) PA
AK123001.1 Homo sapiens cDNA FLJ16790 fis, clone T1ESE2002665, highly similar to Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 8 (SLC12A8), mRNA P
BC063528.1 Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 8, mRNA (cDNA clone IMAGE:4385709), complete cds PA
CR457363.1 Homo sapiens full open reading frame cDNA clone RZPDo834A0614D for gene SLC12A8, solute carrier family 12 (potassium/chloride transporters), member 8; complete cds, incl. stopcodon P
AK026841.1 Homo sapiens cDNA: FLJ23188 fis, clone LNG12038 PA
NM_024628.5 Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 8 (SLC12A8), transcript variant 1, mRNA P
BC126160.1 Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 8, mRNA (cDNA clone MGC:161438 IMAGE:8991876), complete cds P
BC126158.1 Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 8, mRNA (cDNA clone MGC:161436 IMAGE:8991874), complete cds P
BC020506.1 Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 8, mRNA (cDNA clone IMAGE:3847417), complete cds PA
AK308484.1 Homo sapiens cDNA, FLJ98525 P
AF390442.1 Homo sapiens solute carrier family 12 member 8 (SLC12A8) mRNA, partial cds P
NM_001195483.1 Homo sapiens solute carrier family 12 (potassium/chloride transporters), member 8 (SLC12A8), transcript variant 2, mRNA P

EST sequences (81)

BX100631.1 Clone IMAGp998P212693_;_IMAGE:1076612 intestine
BX091724.1 Clone IMAGp998P192228_;_IMAGE:898050 kidney P
AI344284.1 Clone IMAGE:2062737 intestine 3' read
AI357919.1 Clone IMAGE:1987291 uterus 3' read A
AI560070.1 Clone IMAGE:2187558 stomach 3' read A
BX283522.1 Clone IMAGp958H171884_;_IMAGE:5424064 eye P
BX338157.2 Clone CS0DI056YC05 placenta 3' read
BX338158.2 Clone CS0DI056YC05 placenta 5' read P
BX371740.2 Clone CS0DI056YC05 placenta 3' read P
BX379003.2 Clone CS0DI028YP10 placenta 3' read
BX379004.2 Clone CS0DI028YP10 placenta 5' read P
BX369281.1 Clone CS0DI056YC05 placenta 5' read P
BX369282.1 Clone CS0DI056YC05 placenta 5' read P
BX393516.2 Clone CS0DB005YL19 uncharacterized tissue 5' read P
BX481932.1 Clone DKFZp686C18228 muscle 5' read P
AW081815.1 Clone IMAGE:2580197 esophagus 3' read A
AW089063.1 Clone IMAGE:2590479 brain 3' read A
AW130496.1 Clone IMAGE:2621641 stomach 3' read A
AW949235.1 prostate
CN288692.1 embryonic tissue 5' read P
AW974269.1 uncharacterized tissue
BE182986.1 pharynx
CV029703.1 mixed 5' read P
CR735630.1 Clone IMAGp958N201597_;_IMAGE:4734547 liver 5' read P
CR736505.1 Clone IMAGp998M182227_;_IMAGE:897593 kidney 5' read
BP293435.1 Clone LNG12038 lung 5' read P
BP293701.1 Clone LNG13645 lung 5' read P
BE867590.1 Clone IMAGE:3847417 intestine 5' read P
DN997311.1 Clone TC111469 mammary gland 5' read P
BP423751.1 Clone HIE07322r intestine 3' read P
DR761563.1 Clone IMAGE:7971108 embryonic tissue 5' read P
H53569.1 Clone IMAGE:202732 mixed 3' read A
BF375829.1 testis
DA038736.1 Clone BGGI12001414 uncharacterized tissue 5' read P
DA162591.1 Clone BRAMY2023026 brain 5' read P
DA170176.1 Clone BRAMY2032162 brain 5' read P
DA023288.1 Clone ASTRO2005548 brain 5' read P
DA647461.1 Clone MESAN1000029 kidney 5' read P
DA620795.1 Clone JCMLC2002568 uncharacterized tissue 5' read
DA468484.1 Clone D9OST2000507 blood 5' read P
DA468661.1 Clone D9OST2000716 blood 5' read P
DA601111.1 Clone HSYRA2006375 connective tissue 5' read P
DA597011.1 Clone HSYRA2001263 connective tissue 5' read P
BF055959.1 Clone IMAGE:3393249 mixed 3' read A
DA382930.1 Clone BRTHA2017035 brain 5' read
DA718666.1 Clone NT2RI2026956 5' read P
DB001152.1 Clone TBAES2003008 mammary gland 5' read A
DA998426.1 Clone T1ESE2002665 uncharacterized tissue 5' read P
DA751724.1 Clone NT2RP7017637 testis 5' read P
DA751985.1 Clone NT2RP7017945 testis 5' read P
DA858738.1 Clone PLACE7010394 placenta 5' read P
BF508385.1 Clone IMAGE:3089509 uncharacterized tissue 3' read A
DB335121.1 Clone T1ESE2002665 uncharacterized tissue 3' read A
DB225033.1 Clone TRACH3016799 trachea 5' read
DB364518.1 Clone NT2RP2001648 testis 3' read A
BG107319.1 Clone IMAGE:4385709 lymph 5' read P
BG149722.1 Clone IMAGE:3367534 lung 3' read
DB444466.1 Clone H013015D13 testis 5' read
DB509316.1 Clone H013015D13 testis 3' read A
EC467749.1 prostate
EC468069.1 prostate
EC468332.1 prostate
EC482656.1 prostate
EC483121.1 prostate
EC496826.1 prostate
EC540418.1 prostate
BG991055.1 larynx
BM050847.1 Clone IMAGE:5424064 eye 5' read P
BM051200.1 Clone IMAGE:5424850 eye 5' read P
BM874687.1 mouth 5' read
BM991198.1 Clone IMAGE:5862806 lung 3' read A
AA188763.1 Clone IMAGE:626189 cervix 3' read A
AA188631.1 Clone IMAGE:626189 cervix 5' read P
BU676947.1 Clone UI-CF-DU1-aan-a-11-0-UI lung 3' read A
CA314324.1 Clone UI-CF-FN0-aez-h-12-0-UI lung 3' read A
AA331231.1 embryonic tissue 5' read
AA291644.1 Clone IMAGE:724508 ovary 3' read A
AA405280.1 Clone IMAGE:724508 ovary 5' read P
AA592937.1 Clone IMAGE:1076564 intestine 3' read A
AA593021.1 Clone IMAGE:1076612 intestine 3' read A
AA598947.1 Clone IMAGE:898050 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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