> ArfGAP with GTPase domain, ankyrin repeat and PH domain 5 (AGAP5)
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UGID:2499201     UniGene Hs.651147     Homo sapiens (human)   AGAP5 Links
ArfGAP with GTPase domain, ankyrin repeat and PH domain 5 (AGAP5)

Human protein-coding gene AGAP5. Represented by 24 ESTs from 20 cDNA libraries. Corresponds to reference sequence NM_001144000.1. [UniGene 2499201 - Hs.651147]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001137472.1 AGAP5 gene product H. sapiens 100.0 685
NP_001032213.1 Agap1 gene product M. musculus 80.7 553
NP_001084915.1 arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 X. laevis 71.4 609
XP_001921526.2 PREDICTED: centaurin, gamma 2-like D. rerio 70.9 605
NP_723850.1 centaurin gamma 1A, isoform C D. melanogaster 54.0 263
NP_001022838.1 Protein CNT-2, isoform c C. elegans 47.8 268
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_001141368.3 PREDICTED: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 7 isoform 1 P. troglodytes 97.2 420
XP_001519922.2 PREDICTED: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like O. anatinus 83.0 159

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; embryonic tissue; mammary gland; eye; mixed; larynx; heart; placenta; bladder; prostate; lung; lymph node; testis; connective tissue; pancreas; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 10
Map position: 10q22.2
UniSTS entry: Chr 10 RH44360
UniSTS entry: Chr 10 RH40305
UniSTS entry: SHGC-56946
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

NM_001144000.1 Homo sapiens ArfGAP with GTPase domain, ankyrin repeat and PH domain 5 (AGAP5), mRNA P

EST sequences (24)

CB052212.1 Clone IMAGE:3290197 uncharacterized tissue 3' read PA
CB052213.1 Clone IMAGE:3290197 uncharacterized tissue 5' read P
AI952039.1 Clone IMAGE:2546683 lung 3' read P
CN480362.1 Clone UI-H-EU0-azt-m-08-0-UI connective tissue 3' read PA
CN351506.1 embryonic tissue 5' read P
BE006995.1 mammary gland
BE780448.1 Clone IMAGE:3871849 eye 5' read P
DR008109.1 Clone MGC5.1.1.1.1.E03 mixed P
CR989649.1 Clone RZPDp9016I1730 uncharacterized tissue 5' read P
BF355312.1 larynx P
BF355321.1 larynx P
DB318866.1 Clone HEART2008907 heart 3' read P
BF987679.1 placenta
BG289146.1 Clone IMAGE:4516280 bladder 5' read P
EC466726.1 prostate
EC474154.1 prostate
EC559196.1 prostate
N92723.1 Clone IMAGE:306464 lung 3' read
BM194251.1 Clone TCAAP1493 lymph node P
AA167836.1 Clone IMAGE:632189 testis 5' read P
BU947924.1 Clone IMAGE:6130284 pancreas 5' read P
HY221081.1 Clone H04D124H06 testis P
CA438986.1 Clone UI-H-DI0-auu-k-03-0-UI lung 3' read PA
AA285281.1 bone marrow 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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