> Zinc finger, CCHC domain containing 18 (ZCCHC18)
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UGID:2478962     UniGene Hs.648338     Homo sapiens (human)   ZCCHC18 Links
Zinc finger, CCHC domain containing 18 (ZCCHC18)

Human protein-coding gene ZCCHC18. Represented by 66 ESTs from 30 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2478962 - Hs.648338]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001137450.1 ZCCHC18 gene product H. sapiens 100.0 402
NP_082601.1 Zcchc12 gene product M. musculus 74.9 401
Other hits (2 of 10) [Show all]SpeciesId(%)Len(aa)
XP_003317651.1 PREDICTED: LOW QUALITY PROTEIN: putative zinc finger CCHC domain-containing protein 18 P. troglodytes 99.0 402
XP_003919642.1 PREDICTED: LOW QUALITY PROTEIN: putative zinc finger CCHC domain-containing protein 18 P. anubis 92.5 371

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; uncharacterized tissue; mixed; pancreas; muscle; embryonic tissue; testis; eye; heart; uterus; thymus; placenta; amniotic fluid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xq22.2
UniSTS entry: Chr X SHGC-58402
UniSTS entry: Chr X SHGC-132991
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

AF086548.1 Homo sapiens full length insert cDNA clone ZE12C09 A
NM_001143978.1 Homo sapiens zinc finger, CCHC domain containing 18 (ZCCHC18), transcript variant 1, mRNA PA
NR_026694.1 Homo sapiens zinc finger, CCHC domain containing 18 (ZCCHC18), transcript variant 2, non-coding RNA A

EST sequences (66)

AI125357.1 Clone IMAGE:1736995 testis 3' read A
AI125489.1 Clone IMAGE:1737075 testis 3' read
AI125814.1 Clone IMAGE:1737300 testis 3' read
BX108498.1 Clone IMAGp998J17824_;_IMAGE:358768 heart
AI216593.1 Clone IMAGE:1884491 lung 3' read
AI243339.1 Clone IMAGE:1846210 mixed 3' read
AI656548.1 Clone IMAGE:2244324 uncharacterized tissue 3' read A
AI698542.1 Clone IMAGE:2302368 mixed 3' read
AI870926.1 Clone IMAGE:2430180 brain 3' read
BX478233.1 Clone DKFZp686I06203 muscle 5' read
AW292491.1 Clone IMAGE:2725282 uncharacterized tissue 3' read A
CK299436.1 Clone UI-E-EJ1-ajv-m-22-0-UI eye 3' read A
AW511209.1 Clone IMAGE:2912364 mixed 3' read
AW770578.1 Clone IMAGE:3008889 lung 3' read
CK823415.1 Clone IMAGE:6136458 pancreas 3' read A
CK823416.1 Clone IMAGE:6136458 pancreas 5' read A
CN266012.1 embryonic tissue 5' read
CN272796.1 embryonic tissue 5' read
CN276103.1 embryonic tissue 5' read P
BE465284.1 Clone IMAGE:3182884 lung 3' read
BE465294.1 Clone IMAGE:3182883 lung 3' read
BE466165.1 Clone IMAGE:3212351 lung 3' read
BE468036.1 Clone IMAGE:3214016 lung 3' read
BE673059.1 Clone IMAGE:3220770 uncharacterized tissue 3' read A
BF446577.1 Clone IMAGE:3705586 lung 3' read
DA118315.1 Clone BRACE3038322 brain 5' read
DA118323.1 Clone BRACE3038339 brain 5' read
DA166381.1 Clone BRAMY2027593 brain 5' read
DA293502.1 Clone BRHIP2005704 brain 5' read
DA114698.1 Clone BRACE3033411 brain 5' read
DA503483.1 Clone FCBBF3018373 brain 5' read
DA500376.1 Clone FCBBF3014310 brain 5' read
DA377394.1 Clone BRTHA2009415 brain 5' read
DA803649.1 Clone OCBBF3008494 brain 5' read
DA772007.1 Clone OCBBF2005134 brain 5' read
BF433530.1 Clone IMAGE:3702273 lung 3' read P
DA781887.1 Clone OCBBF2017538 brain 5' read
DA769782.1 Clone OCBBF2002323 brain 5' read
DA808943.1 Clone OCBBF3025016 brain 5' read
DA710351.1 Clone NT2RI2015806 5' read
DA790216.1 Clone OCBBF2028809 brain 5' read
DA787077.1 Clone OCBBF2024494 brain 5' read
DA788016.1 Clone OCBBF2025799 brain 5' read
DB351152.1 Clone UTERU2006036 uterus 3' read
DB251959.1 Clone UTERU2006036 uterus 5' read
DB145256.1 Clone THYMU3020102 thymus 5' read
BF988949.1 placenta P
DB547239.1 Clone H023079J24 brain 3' read
DB478580.1 Clone H023079J24 brain 5' read
EG357708.1 Clone UCSC6ss.1.1.L1.1.E01. mixed P
EG357709.1 Clone UCSC6ss.1.1.L1.1.E01. mixed P
EG357712.1 Clone UCSC6ss.1.1.L1.1.G11. mixed P
EG357713.1 Clone UCSC6ss.1.1.L1.1.G11. mixed
BG945146.1 amniotic fluid
BM688635.1 Clone UI-E-CQ1-acq-a-02-0-UI brain 5' read
BM893819.1 Clone IMAGE:6136458 pancreas 3' read A
BM893984.1 Clone IMAGE:6136467 pancreas 3' read A
BM967119.1 Clone IMAGE:6136458 pancreas 5' read A
BM973319.1 Clone UI-CF-EC1-abx-e-17-0-UI lung 3' read A
W94490.1 Clone IMAGE:358768 heart 5' read
W94491.1 Clone IMAGE:358768 heart 3' read
BQ186368.1 Clone UI-E-EJ1-ajn-p-24-0-UI eye 5' read
BQ189271.1 Clone UI-E-EJ1-ajv-m-22-0-UI eye 5' read
BU727018.1 Clone UI-E-CQ1-acq-a-02-0-UI brain 3' read A
AA609152.1 Clone IMAGE:1031385 testis 3' read
AA934926.1 Clone IMAGE:1569658 lung 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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