> Stromal antigen 3-like 1 (STAG3L1)
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UGID:2139204     UniGene Hs.632310     Homo sapiens (human)   STAG3L1 Links
Stromal antigen 3-like 1 (STAG3L1)

Human pseudo gene STAG3L1. Represented by 260 ESTs from 127 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2139204 - Hs.632310]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003949264.1 PREDICTED: LOW QUALITY PROTEIN: STAG3-like protein 1-like P. troglodytes 99.5 204
NP_036579.2 STAG3 gene product H. sapiens 87.0 284
NP_058660.2 Stag3 gene product M. musculus 69.7 290
XP_692954.2 PREDICTED: cohesin subunit SA-1 D. rerio 55.2 230
NP_001083864.1 cohesin subunit SA-1 X. laevis 55.2 230
NP_477268.2 stromalin D. melanogaster 49.4 176
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_001102876.1 PREDICTED: cohesin subunit SA-3-like M. mulatta 85.6 284
XP_003895919.1 PREDICTED: uncharacterized protein LOC101009720 P. anubis 84.6 130

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; kidney; adipose tissue; lung; eye; pancreas; mixed; bone marrow; uncharacterized tissue; intestine; skin; tonsil; mouth; embryonic tissue; pharynx; spleen; mammary gland; heart; stomach; cervix; thymus; muscle; connective tissue; blood; lymph; lymph node; nerve; uterus; placenta; ovary; pituitary gland; trachea; liver; thyroid; bladder; prostate; esophagus; ascites; larynx; ganglia; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7q11.23
UniSTS entry: Chr 7 RH46474 [Map Viewer]
UniSTS entry: Chr 7 RH16531 [Map Viewer]
UniSTS entry: Chr 7 D7S489 [Map Viewer]
UniSTS entry: Chr 7 D7S489 [Map Viewer]
UniSTS entry: Chr 7 Bdyc3h07 [Map Viewer]
UniSTS entry: Chr 7 D7S1490
UniSTS entry: Chr 1 GDB:335751
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

AL137492.1 Homo sapiens mRNA; cDNA DKFZp434A0131 (from clone DKFZp434A0131) PA
BC108680.1 Homo sapiens stromal antigen 3-like 1, mRNA (cDNA clone IMAGE:5416073), complete cds PA
BC002581.2 Homo sapiens stromal antigen 3-like 2, mRNA (cDNA clone IMAGE:3160366), complete cds PA
AK289466.1 Homo sapiens cDNA FLJ78546 complete cds P
AK291820.1 Homo sapiens cDNA FLJ76564 complete cds P
BC030509.1 Homo sapiens stromal antigen 3-like 1, mRNA (cDNA clone IMAGE:4400104), complete cds PA
AK303592.1 Homo sapiens cDNA FLJ52235 complete cds, moderately similar to Cohesin subunit SA-3 P
AK316130.1 Homo sapiens cDNA, FLJ79029 complete cds, moderately similar to Cohesin subunit SA-3 P
NR_040583.1 Homo sapiens stromal antigen 3-like 1 (STAG3L1), non-coding RNA P
NR_040582.1 Homo sapiens stromal antigen 3-like 3 (STAG3L3), non-coding RNA PA

EST sequences (260)

AI201384.1 Clone IMAGE:1755504 testis 3' read PA
AU279428.1 Clone AHMSC2000152 5' read
AI697044.1 Clone IMAGE:2325413 intestine 3' read
BX280902.1 Clone IMAGp998K1812061_;_IMAGE:5416073 mammary gland
AL045791.2 Clone DKFZp434G206 testis 5' read
CB956482.1 Clone IMAGE:30353268 mixed 5' read
CB959347.1 Clone IMAGE:30350972 mixed 5' read
CB995027.1 Clone IMAGE:30338190 placenta 5' read
CD237020.1 pituitary gland P
CD239648.1 pituitary gland P
CD557430.1 Clone IMAGE:30387865 testis 5' read P
CD642778.1 Clone IMAGE:30426881 embryonic tissue 5' read
BX487814.1 Clone DKFZp686E15259 muscle 5' read
CD684782.1 pharynx
CD686892.1 pharynx
CD687391.1 pharynx
CD687093.1 pharynx
CD687170.1 pharynx
CD701498.1 pharynx P
CD702045.1 pharynx
CD706440.1 pharynx
CF457263.1 Clone IMAGE:30514202 nerve 5' read P
AW501711.1 Clone IMAGE:3074805 lymph node 5' read
AW859119.1 intestine
AW879458.1 ovary P
CN414509.1 embryonic tissue 5' read P
CN418250.1 embryonic tissue 5' read P
CN418252.1 embryonic tissue 5' read
CN418253.1 embryonic tissue 5' read
CN418254.1 embryonic tissue 5' read
CN418255.1 embryonic tissue 5' read
CN418247.1 embryonic tissue 5' read
CN418245.1 embryonic tissue 5' read
CN418246.1 embryonic tissue 5' read P
CN418248.1 embryonic tissue 5' read
CN418256.1 embryonic tissue 5' read
BE168330.1 thyroid P
BE263150.1 Clone IMAGE:3160366 brain 5' read
BE268709.1 Clone IMAGE:3143208 lymph 5' read P
BE270898.1 Clone IMAGE:2966337 lymph 5' read P
CV325932.1 blood
BE295807.1 Clone IMAGE:3532133 muscle 5' read
BE385128.1 Clone IMAGE:3615794 skin 5' read P
BE385165.1 Clone IMAGE:3615770 skin 5' read
BE386003.1 Clone IMAGE:3617798 skin 5' read P
BE388493.1 Clone IMAGE:3621731 uterus 5' read P
BE394029.1 Clone IMAGE:3659325 uterus 5' read
BE397268.1 Clone IMAGE:3620739 lymph 5' read
BE408382.1 Clone IMAGE:3637197 placenta 5' read P
BE561553.1 Clone IMAGE:3688183 lymph 5' read
BP396375.1 Clone hbt09824 pancreas 3' read
BE741310.1 Clone IMAGE:3948106 ovary 5' read
BE791619.1 Clone IMAGE:3940355 lung 5' read P
BE799982.1 Clone IMAGE:3942235 lung 5' read P
BE831788.1 blood
DN994485.1 Clone TC101830 brain 5' read P
BF084045.1 intestine P
AV760380.2 Clone MDSDOA04 bone marrow 5' read
CR987514.1 Clone RZPDp9017O0915 uncharacterized tissue 5' read
BF129137.1 Clone IMAGE:4054321 tonsil 5' read P
BF129145.1 Clone IMAGE:4054323 tonsil 5' read P
BY797638.2 Clone HE2697.seq eye 5' read P
BF305107.1 Clone IMAGE:4122393 muscle 5' read
BF309903.1 Clone IMAGE:4138121 muscle 5' read
BF377500.1 testis P
DA008250.1 Clone ADIPS1000065 adipose tissue 5' read
DA055279.1 Clone BRACE2001279 brain 5' read
DA174729.1 Clone BRAMY2037912 brain 5' read
DA096034.1 Clone BRACE3006070 brain 5' read
DA207842.1 Clone BRAWH2015033 brain 5' read
DA260345.1 Clone BRCAN2012298 brain 5' read
DA261851.1 Clone BRCAN2014190 brain 5' read
DA111800.1 Clone BRACE3029381 brain 5' read
DA068150.1 Clone BRACE2018206 brain 5' read
DA297312.1 Clone BRHIP2010569 brain 5' read P
DA192708.1 Clone BRAMY3016241 brain 5' read P
DA081531.1 Clone BRACE2034892 brain 5' read
DA232389.1 Clone BRAWH3027936 brain 5' read P
DA082539.1 Clone BRACE2036139 brain 5' read P
DA227093.1 Clone BRAWH3021086 brain 5' read
DA188905.1 Clone BRAMY3010414 brain 5' read
DA692116.1 Clone NT2NE2011967 5' read
DA569861.1 Clone HEMBA1003665 embryonic tissue 5' read P
DA569892.1 Clone HEMBA1003719 embryonic tissue 5' read
DA693709.1 Clone NT2NE2013979 5' read P
DA458723.1 Clone CTONG3004857 mouth 5' read
DA537278.1 Clone FEKID1000040 kidney 5' read
DA688195.1 Clone NT2NE2006927 5' read
DA426736.1 Clone COLON2002034 intestine 5' read
DA622173.1 Clone KIDNE2001281 kidney 5' read
DA655811.1 Clone MESAN2011313 kidney 5' read
DA505391.1 Clone FCBBF3020885 brain 5' read
DA505888.1 Clone FCBBF3021525 brain 5' read
DA623463.1 Clone KIDNE2002976 kidney 5' read
DA624731.1 Clone KIDNE2004595 kidney 5' read
DA593903.1 Clone HLUNG2016721 lung 5' read
DA555040.1 Clone HCHON2005180 connective tissue 5' read
DA634680.1 Clone KIDNE2016620 kidney 5' read
DA589787.1 Clone HLUNG2011546 lung 5' read
DA530331.1 Clone FEBRA2023282 brain 5' read
DA530351.1 Clone FEBRA2023306 brain 5' read P
DA446200.1 Clone CTONG2017088 mouth 5' read
DA374533.1 Clone BRTHA2005499 brain 5' read P
AV725020.1 Clone HTCAGA11 brain 5' read
DA381117.1 Clone BRTHA2014586 brain 5' read
DA415292.1 Clone BRTHA3024019 brain 5' read
DA690429.1 Clone NT2NE2009828 5' read P
DA350520.1 Clone BRSSN2013165 brain 5' read
DA606123.1 Clone IMR322003112 brain 5' read
DA501155.1 Clone FCBBF3015303 brain 5' read
DA920542.1 Clone SMINT2005989 intestine 5' read
DA960332.1 Clone SPLEN2040734 spleen 5' read
DA810538.1 Clone OCBBF3027153 brain 5' read
DA837410.1 Clone PLACE6003350 placenta 5' read
DB029652.1 Clone TESTI2012929 testis 5' read
DA995227.1 Clone SYNOV4008272 connective tissue 5' read P
DB043704.1 Clone TESTI2031487 testis 5' read P
DB037819.1 Clone TESTI2023913 testis 5' read P
DB004872.1 Clone TBAES2007738 mammary gland 5' read
DA780436.1 Clone OCBBF2015665 brain 5' read P
DA879773.1 Clone PROST2018937 prostate 5' read P
DA813980.1 Clone PEBLM2001082 blood 5' read
DA964948.1 Clone STOMA2003124 stomach 5' read
DA959385.1 Clone SPLEN2039405 spleen 5' read
DB046499.1 Clone TESTI2035067 testis 5' read
DA821202.1 Clone PERIC2001116 heart 5' read
DB020602.1 Clone TESTI2000857 testis 5' read
DA783175.1 Clone OCBBF2019214 brain 5' read
DB008962.1 Clone TCERX2002797 cervix 5' read
DA790407.1 Clone OCBBF2029056 brain 5' read
DA790741.1 Clone OCBBF2029532 brain 5' read
DB021859.1 Clone TESTI2002604 testis 5' read P
DB048802.1 Clone TESTI2037936 testis 5' read
DA739728.1 Clone NT2RP7001480 testis 5' read
DA791024.1 Clone OCBBF2029929 brain 5' read
DB049155.1 Clone TESTI2038410 testis 5' read
DA935757.1 Clone SPLEN2007464 spleen 5' read
DA785713.1 Clone OCBBF2022528 brain 5' read
DA746887.1 Clone NT2RP7011981 testis 5' read
DA937944.1 Clone SPLEN2010948 spleen 5' read
DA789037.1 Clone OCBBF2027147 brain 5' read P
DA789316.1 Clone OCBBF2027569 brain 5' read
DB270328.1 Clone UTERU2031669 uterus 5' read
DB153107.1 Clone THYMU3030616 thymus 5' read
DB154390.1 Clone THYMU3032347 thymus 5' read P
DB125125.1 Clone THYMU2034577 thymus 5' read
DB132130.1 Clone THYMU3002002 thymus 5' read
DB159876.1 Clone THYMU3039814 thymus 5' read P
DB061697.1 Clone TESTI4001625 testis 5' read
DB253111.1 Clone UTERU2007587 uterus 5' read
DB143874.1 Clone THYMU3018190 thymus 5' read A
DB209690.1 Clone TRACH2022728 trachea 5' read A
DB098741.1 Clone TESTI4050296 testis 5' read P
DB150946.1 Clone THYMU3027716 thymus 5' read P
DB138182.1 Clone THYMU3010260 thymus 5' read
DB105776.1 Clone THYMU2006705 thymus 5' read
DW418820.1 liver
DW440713.1 liver
DW464808.1 liver
BF981321.1 Clone IMAGE:4400104 intestine 5' read P
DB480406.1 Clone H023086C20 brain 5' read
DB483600.1 Clone H023097P19 brain 5' read
DB443789.1 Clone H013011O19 testis 5' read
DB466233.1 Clone H023021D24 brain 5' read
DB447743.1 Clone H013033G09 testis 5' read
DB448858.1 Clone H013038O13 testis 5' read
DB449782.2 Clone H013044G06 testis 5' read P
DB471244.1 Clone H023050O08 brain 5' read
DB450860.1 Clone H013051B08 testis 5' read
DB496245.1 Clone H033061F07 brain 5' read
DB457629.1 Clone H013078H17 testis 5' read
BG281392.1 Clone IMAGE:4544398 skin 5' read
BG326817.1 Clone IMAGE:4563671 kidney 5' read PA
BG328986.1 Clone IMAGE:4558450 eye 5' read
BG420650.1 Clone IMAGE:4590607 kidney 5' read P
BG394242.1 Clone IMAGE:4579017 eye 5' read P
BG396217.1 Clone IMAGE:4580759 eye 5' read P
BG472630.1 Clone IMAGE:4646020 eye 5' read P
BG488866.1 Clone IMAGE:4662758 lung 5' read
BG504898.1 Clone IMAGE:4664550 testis 5' read P
BG537494.1 Clone IMAGE:4690730 lung 5' read
BG773040.1 Clone IMAGE:4838070 testis 5' read P
BG823177.1 Clone IMAGE:4866175 intestine 5' read P
BG829469.1 Clone IMAGE:4899302 pancreas 5' read
BG896490.1 connective tissue
BG896534.1 connective tissue
BI090463.1 Clone IMAGE:4995133 placenta 5' read
BI017879.1 lung
BG721376.1 Clone IMAGE:4826886 testis 5' read P
BI192818.1 Clone IMAGE:5088469 pancreas 5' read
DC299694.1 Clone ASTRO2009538 brain 5' read
DC366196.1 Clone NT2NE2010697 5' read
DC366131.1 Clone NT2NE2009857 5' read
BI461121.1 Clone IMAGE:5272921 testis 5' read P
DC339495.1 Clone BRTHA2000621 brain 5' read
DC364638.1 Clone MESAN2017900 kidney 5' read
DC362416.1 Clone KIDNE2017240 kidney 5' read
DC331100.1 Clone BRHIP2014588 brain 5' read
DC302581.1 Clone BRACE2005338 brain 5' read
DC302582.1 Clone BRACE2005343 brain 5' read
BI463540.1 Clone IMAGE:5269356 testis 5' read
DC406884.1 Clone THYMU2033463 thymus 5' read
DC340022.1 Clone BRTHA2008396 brain 5' read
DC300821.1 Clone BLADE2002069 bladder 5' read
DC308921.1 Clone BRACE3028945 brain 5' read
DC313115.1 Clone BRAMY2002449 brain 5' read
DC411043.1 Clone THYMU3047011 thymus 5' read
DC414131.1 Clone TRACH2006514 trachea 5' read
DC410426.1 Clone THYMU3039273 thymus 5' read P
DC397350.1 Clone TESTI2027890 testis 5' read
DC394992.1 Clone TESTI2003587 testis 5' read
DC409391.1 Clone THYMU3026047 thymus 5' read
DC395307.1 Clone TESTI2007059 testis 5' read
DC380231.1 Clone PLACE6003806 placenta 5' read
DC395490.1 Clone TESTI2008754 testis 5' read P
DC394406.1 Clone TESOP2007983 esophagus 5' read
DC379516.1 Clone PERIC2005863 heart 5' read
DC361409.1 Clone KIDNE2001352 kidney 5' read
DC363439.1 Clone MESAN2004367 kidney 5' read
DC348623.1 Clone DFNES2002042 skin 5' read
DC361638.1 Clone KIDNE2005503 kidney 5' read
DC307539.1 Clone BRACE3013078 brain 5' read
BI752348.1 Clone IMAGE:5198370 brain 5' read
BI753182.1 Clone IMAGE:5196300 brain 5' read P
BI770304.1 Clone IMAGE:5205696 mixed 5' read P
BI829811.1 Clone IMAGE:5171492 brain 5' read P
BM007884.1 Clone IMAGE:5450448 spleen 5' read
BM014179.1 Clone IMAGE:5416073 mammary gland 5' read P
BM051689.1 Clone IMAGE:5419600 lymph 5' read P
BM555860.1 Clone IMAGE:5549950 intestine 5' read P
BM723683.1 Clone UI-E-EJ0-aiq-d-16-0-UI eye 5' read
BM825397.1 Clone S22SNU16n1-112-F01 ascites 5' read P
BM914517.1 Clone IMAGE:5480199 spleen 5' read
BQ054116.1 Clone IMAGE:5936128 blood 5' read P
BQ300821.1 bladder P
BQ353282.1 larynx
BQ638673.1 Clone hd26c06 eye 5' read P
BQ682393.1 Clone IMAGE:6262094 skin 5' read P
AA039677.1 Clone IMAGE:375902 heart 3' read P
BQ712058.1 Clone IMAGE:6282339 spleen 5' read P
BM149109.1 Clone TCAAP6357 bone marrow P
BQ901168.1 Clone IMAGE:6425074 lung 5' read
BU072639.1 Clone IMAGE:6038203 pancreas 5' read
BU182109.1 Clone IMAGE:6144376 eye 5' read
BU556985.1 Clone IMAGE:6584776 ovary 5' read P
BU594722.1 Clone IMAGE:6450319 mixed 5' read P
BU594954.1 Clone IMAGE:6450651 mixed 5' read P
AA076929.1 Clone 7B05C02 brain
BU664455.1 Clone cl117a04 blood 5' read
BU665329.1 Clone cl129g04 blood 5' read
BU838480.1 Clone IMAGE:6177130 ganglia 5' read P
BU845994.1 Clone IMAGE:6579934 ovary 5' read
HY009730.1 Clone H04D034C04 testis
HY024908.1 Clone H04D085C01 testis
HY025387.1 Clone H04D086M05 testis
HY236491.1 Clone H04D174J07 testis P
AA308856.1 brain 5' read
CA771389.1 Clone IMAGE:6131807 pancreas 5' read P
AA614566.1 Clone IMAGE:1130030 mammary gland 3' read
AA724158.1 Clone 1342095 parathyroid 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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