Chromosome 1 open reading frame 53 (C1orf53)

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UGID:138824 UniGene Hs.61329 Homo sapiens (human) C1orf53

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Chromosome 1 open reading frame 53 (C1orf53)

Human protein-coding gene C1orf53. Represented by 12 ESTs from 8 cDNA libraries. Corresponds to reference sequence NM_001024594.2. [UniGene 138824 - Hs.61329]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_001138922.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein C1orf53 homolog	P. troglodytes	100.0	144
NP_001019765.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	C1orf53 gene product	H. sapiens	100.0	144
NP_001074695.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	uncharacterized protein LOC69549	M. musculus	74.3	135
Other hits (2 of 6) [Show all]		Species	Id(%)	Len(aa)
XP_003893402.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein C1orf53 homolog	P. anubis	93.1	144
XP_001110794.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein C1orf53-like	M. mulatta	92.4	144

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	uterus; brain; mixed; connective tissue; liver; bone

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	1
	Map position:	1q31.3

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_001024594.2	Homo sapiens chromosome 1 open reading frame 53 (C1orf53), mRNA	PA
BC130634.1	Homo sapiens chromosome 1 open reading frame 53, mRNA (cDNA clone MGC:163506 IMAGE:40146665), complete cds	P
BC130608.1	Homo sapiens chromosome 1 open reading frame 53, mRNA (cDNA clone MGC:163480 IMAGE:40146639), complete cds	P
BC038214.1	Homo sapiens chromosome 1 open reading frame 53, mRNA (cDNA clone IMAGE:5404026)	PA

EST sequences (12)

BX092465.1	Clone IMAGp998E021112	uterus	5' read	P
AI499050.1	Clone IMAGE:2166451	brain	3' read	PA
CD512232.1	Clone IMAGE:30406364	mixed	5' read
DN992588.1	Clone TC102139	brain	5' read	P
BG219885.1		connective tissue		A
BI832220.1	Clone IMAGE:5170843	brain	5' read	P
BI870104.1	Clone IMAGE:5404026	liver	5' read	PA
AA027229.1	Clone IMAGE:469225	uterus	3' read	A
AA026168.1	Clone IMAGE:469225	uterus	5' read
AA036748.1	Clone IMAGE:472156	uterus	5' read
AA057320.1	Clone IMAGE:472156	uterus	3' read
CA414863.1	Clone UI-H-EZ0-bar-f-20-0-UI	bone	3' read	PA

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria