> CCR4-NOT transcription complex, subunit 6 (CNOT6)
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UGID:2077391     UniGene Hs.608380     Homo sapiens (human)   CNOT6 Order cDNA clone, Links
CCR4-NOT transcription complex, subunit 6 (CNOT6)

Human protein-coding gene CNOT6. Represented by 303 ESTs from 161 cDNA libraries. Corresponds to reference sequence NM_015455.3. [UniGene 2077391 - Hs.608380]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001155177.1 PREDICTED: CCR4-NOT transcription complex subunit 6 isoform 1 P. troglodytes 100.0 556
NP_056270.2 CNOT6 gene product H. sapiens 100.0 556
XP_002804715.1 PREDICTED: CCR4-NOT transcription complex subunit 6-like M. mulatta 99.8 556
XP_003900692.1 PREDICTED: CCR4-NOT transcription complex subunit 6, partial P. anubis 99.8 513
NP_997649.1 Cnot6 gene product M. musculus 97.3 551
NP_001184194.1 CCR4-NOT transcription complex subunit 6 X. laevis 97.3 551
NP_997825.1 cnot6 gene product D. rerio 87.2 556
NP_732967.1 twin, isoform B D. melanogaster 63.2 525
NP_001023608.1 Protein CCR-4, isoform c C. elegans 55.3 553
Other hits (2 of 39) [Show all]SpeciesId(%)Len(aa)
XP_001500898.2 PREDICTED: CCR4-NOT transcription complex subunit 6 E. caballus 98.7 556
XP_538584.2 PREDICTED: CCR4-NOT transcription complex subunit 6 isoform 1 C. lupus familiaris 98.6 556

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; embryonic tissue; uterus; uncharacterized tissue; lung; intestine; mammary gland; cervix; testis; lymph node; skin; placenta; prostate; blood; eye; liver; connective tissue; kidney; muscle; stomach; pharynx; trachea; thyroid; thymus; epididymis; bone; ear; pancreas; mouth; adrenal gland; ovary; bone marrow; heart; parathyroid; bladder; ascites
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q35.3
UniSTS entry: Chr 5 WI-22407 [Map Viewer]
UniSTS entry: Chr 5 RH100
UniSTS entry: Chr 5 SHGC-32852
UniSTS entry: RH78955
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AL110144.1 Homo sapiens mRNA; cDNA DKFZp564G1964 (from clone DKFZp564G1964) A
AB033020.1 Homo sapiens mRNA for KIAA1194 protein, partial cds P
BC073142.1 Homo sapiens cDNA clone IMAGE:6502197, partial cds A
NM_015455.3 Homo sapiens CCR4-NOT transcription complex, subunit 6 (CNOT6), mRNA P
BC090918.1 Homo sapiens cDNA clone IMAGE:30418449 A
AK023599.1 Homo sapiens cDNA FLJ13537 fis, clone PLACE1006534, weakly similar to POLYPEPTIDE N-ACETYLGALACTOSAMINYLTRANSFERASE (EC 2.4.1.41)
BC114958.1 Homo sapiens cDNA clone IMAGE:40036262, containing frame-shift errors P
BC152469.1 Homo sapiens CCR4-NOT transcription complex, subunit 6, mRNA (cDNA clone MGC:176727 IMAGE:8862606), complete cds PA
AK314752.1 Homo sapiens cDNA, FLJ95618
BC027476.1 Homo sapiens CCR4-NOT transcription complex, subunit 6, mRNA (cDNA clone IMAGE:5000764), complete cds A
BC015331.1 Homo sapiens CCR4-NOT transcription complex, subunit 6, mRNA (cDNA clone IMAGE:4414956) A

EST sequences (303)

AA975292.1 Clone IMAGE:1588472 uncharacterized tissue 3' read A
AA983617.1 Clone IMAGE:1559510 intestine 3' read A
AA911713.1 Clone IMAGE:1521082 lung 3' read
AI005662.1 Clone IMAGE:1641632 testis 3' read A
AI025725.1 Clone IMAGE:1646506 parathyroid 3' read A
AI028199.1 Clone IMAGE:1645150 testis 3' read A
AA948530.1 Clone IMAGE:1560421 intestine 3' read A
AI084832.1 Clone IMAGE:1653999 mixed 3' read A
BX115541.1 Clone IMAGp998G163710_;_IMAGE:1466919 mixed
AI187427.1 Clone IMAGE:1751635 testis 3' read
AI221941.1 Clone IMAGE:1842877 mixed 3' read A
CB107126.1 Clone L3SNU475-13-F01 liver 5' read
CB137373.1 Clone L6ChoCK0-24-H06 liver 5' read
CB150547.1 Clone C1SNU17-31-E02 cervix 5' read
CB134449.1 Clone L14ChoiCK0-18-G05 liver 5' read
AI276566.1 Clone IMAGE:1877287 mixed 3' read A
CB132879.1 Clone L9SNU354-8-B03 liver 5' read
AI201876.1 Clone IMAGE:1944271 prostate 3' read A
AI204655.1 Clone IMAGE:1732307 heart 3' read A
AI280050.1 Clone IMAGE:1853777 mixed 3' read A
AI289614.1 Clone IMAGE:1992476 uterus 3' read A
AI356219.1 Clone IMAGE:2016892 brain 3' read A
AI421025.1 Clone IMAGE:2095205 prostate 3' read A
AI554034.1 Clone IMAGE:2090562 mixed 3' read A
AI569899.1 Clone IMAGE:2222401 pancreas 3' read A
AI401342.1 Clone IMAGE:2113568 mixed 3' read A
AI659480.1 Clone IMAGE:2252605 prostate 3' read A
AI669732.1 Clone IMAGE:2250842 prostate 3' read
AI671870.1 Clone IMAGE:2308210 uncharacterized tissue 3' read A
AI683048.1 Clone IMAGE:2262974 uterus 3' read A
R57651.1 Clone F4543 heart 5' read
CB243439.1 Clone UI-CF-FN0-agd-i-09-0-UI lung 3' read A
AI744474.1 Clone IMAGE:2362800 intestine 3' read A
AI798092.1 Clone IMAGE:2387128 uncharacterized tissue 3' read
AI810439.1 Clone IMAGE:2312391 prostate 3' read A
AI811339.1 Clone IMAGE:2261998 uterus 3' read A
AL040876.1 Clone DKFZp434H2415 testis 3' read A
AI829051.1 Clone IMAGE:2405078 lung 3' read A
AI933147.1 Clone IMAGE:2466513 brain 3' read A
AI935999.1 Clone IMAGE:2452061 uterus 3' read A
CB959839.1 Clone IMAGE:30342238 placenta 5' read P
BX431157.2 Clone CS0DF019YD12 brain 5' read
AI972933.1 Clone IMAGE:2490645 prostate 3' read A
CD654531.1 Clone IMAGE:30426902 embryonic tissue 5' read P
BX504509.1 Clone DKFZp686J08136 muscle 5' read P
AW043695.1 Clone IMAGE:2554852 mixed 3' read A
CD684108.1 pharynx
AW079091.1 Clone IMAGE:2574399 intestine 3' read A
AW117476.1 Clone IMAGE:2605074 mixed 3' read A
AW128938.1 Clone IMAGE:2615333 brain 3' read A
Z44636.1 Clone c-26a09 brain
F03677.1 Clone c-26a09 brain 3' read A
CF121570.1 Clone IMAGE:3103685 lymph node 5' read
CF135521.1 Clone IMAGE:3090145 lymph node 5' read P
CF144140.1 Clone IMAGE:30567655 lymph node 5' read
AW173692.1 Clone IMAGE:2656875 uterus 3' read A
AW183847.1 Clone IMAGE:2664317 mixed 3' read A
AW188843.1 Clone IMAGE:2673866 uterus 3' read A
AW263640.1 Clone IMAGE:2700868 mixed 3' read A
AW272482.1 Clone IMAGE:2813152 mixed 3' read A
F08390.1 Clone c-zsf03 brain
Z41386.1 Clone c-zsf03 brain 3' read A
AW293221.1 Clone IMAGE:2726993 uncharacterized tissue 3' read A
AW339986.1 Clone IMAGE:2907339 mixed 3' read A
D20789.1 Clone mp0830 blood 3' read A
AW511057.1 Clone IMAGE:2912211 mixed 3' read A
AW572656.1 Clone IMAGE:2851102 lymph node 3' read A
AW749984.1 mammary gland P
AW883729.1 ovary
CN357390.1 embryonic tissue 5' read P
CN357391.1 embryonic tissue 5' read
CN357392.1 embryonic tissue 5' read P
CN357393.1 embryonic tissue 5' read
CN357394.1 embryonic tissue 5' read P
CN357395.1 embryonic tissue 5' read
CN357396.1 embryonic tissue 5' read
CN357388.1 embryonic tissue 5' read
CN357385.1 embryonic tissue 5' read P
CN357386.1 embryonic tissue 5' read P
CN357387.1 embryonic tissue 5' read
CN357389.1 embryonic tissue 5' read P
CN357403.1 embryonic tissue 5' read
CN357397.1 embryonic tissue 5' read A
CN357398.1 embryonic tissue 5' read P
CN357399.1 embryonic tissue 5' read
CN357400.1 embryonic tissue 5' read
CN357401.1 embryonic tissue 5' read
AW965316.1 uncharacterized tissue
AW968409.1 uncharacterized tissue
AW968414.1 uncharacterized tissue
AW968421.1 uncharacterized tissue
AW979198.1 uncharacterized tissue A
BE004758.1 mammary gland
BE007800.1 mammary gland
BE065561.1 mammary gland
BE086227.1 mammary gland
BE180051.1 thyroid
BP199813.1 Clone ADR09540 brain 5' read
BP379655.1 Clone WMD06631 uterus 5' read
CV575274.1 Clone oe34c09 eye 5' read
BE536157.1 Clone IMAGE:3446308 placenta 5' read
BE544290.1 Clone IMAGE:3462449 cervix 5' read
BE548782.1 Clone IMAGE:3463938 cervix 5' read
CX787915.1 Clone IMAGE:7484271 embryonic tissue 5' read
BP396646.1 Clone hbt11009 pancreas 3' read A
BE786547.1 Clone IMAGE:3881630 lung 5' read
DN602103.1 Clone IMAGE:7482686 embryonic tissue 5' read
AV687947.2 Clone GKCBJH08 liver 5' read
AV688078.1 Clone GKCBGE02 liver 5' read
AV690165.2 Clone GKCBHC11 liver 5' read
AV692202.1 Clone GKCBIA08 liver 5' read
BE869218.1 Clone IMAGE:3849436 intestine 5' read
BE887434.1 Clone IMAGE:3911273 uterus 5' read
DR003157.1 Clone TC103937 brain 5' read P
BE897352.1 Clone IMAGE:3922424 skin 5' read
BE926053.1 mammary gland P
BE935944.1 brain
BE936032.1 brain P
AV716259.1 Clone DCBBSD09 uncharacterized tissue 5' read
AV735169.1 Clone cdAAJA09 adrenal gland 5' read
AU134079.1 Clone OVARC1001223 ovary 5' read
AU137463.1 Clone PLACE1006534 placenta 5' read
BF209885.1 Clone IMAGE:4097540 bone marrow 5' read
BF223837.1 Clone IMAGE:3704405 lung 3' read A
BF373772.1 stomach P
AA835643.1 Clone IMAGE:1354244 lymph node A
AA860948.1 Clone IMAGE:1406723 testis 3' read A
DN915783.1 Clone MCF7_RNA_L_20_L14 mammary gland
DA347910.1 Clone BRSSN2009534 brain 5' read
DA244676.1 Clone BRAWH3043206 brain 5' read
DA166795.1 Clone BRAMY2028116 brain 5' read
DA325154.1 Clone BRHIP3020001 brain 5' read
DA169238.1 Clone BRAMY2031055 brain 5' read
DA176900.1 Clone BRAMY2040598 brain 5' read
DA028227.1 Clone ASTRO2011924 brain 5' read
DA303751.1 Clone BRHIP2019397 brain 5' read
DA496296.1 Clone FCBBF3009095 brain 5' read
DA529900.1 Clone FEBRA2022742 brain 5' read
DA614627.1 Clone IMR322013626 brain 5' read
DA693424.1 Clone NT2NE2013623 5' read
DA498694.1 Clone FCBBF3012141 brain 5' read
DA402060.1 Clone BRTHA3005675 brain 5' read
AW304095.1 Clone IMAGE:2818963 lung 3' read A
DA370007.1 Clone BRSTN2019010 brain 5' read P
DA485475.1 Clone FCBBF2002544 brain 5' read
DA446855.1 Clone CTONG2018028 mouth 5' read
AW614446.1 Clone IMAGE:2952242 kidney 3' read A
AU141055.1 Clone SKNMC1000041 brain 5' read
DA492489.1 Clone FCBBF3004203 brain 5' read P
DA804139.1 Clone OCBBF3009125 brain 5' read
DA916439.1 Clone SMINT2000823 intestine 5' read
DA799349.1 Clone OCBBF3002959 brain 5' read P
DA805409.1 Clone OCBBF3020433 brain 5' read P
AU157187.1 Clone PLACE1006534 placenta 3' read A
DA996190.1 Clone SYNOV4009468 connective tissue 5' read P
DA854543.1 Clone PLACE7005032 placenta 5' read
DA809967.1 Clone OCBBF3026370 brain 5' read P
DA902837.1 Clone SKNMC2002846 brain 5' read
DA864326.1 Clone PLACE7018024 placenta 5' read P
DA819430.1 Clone PEBLM2007972 blood 5' read
BF476475.1 Clone IMAGE:3255976 prostate 3' read A
DB218179.1 Clone TRACH3007837 trachea 5' read
DB068322.1 Clone TESTI4010215 testis 5' read P
DB069251.1 Clone TESTI4011436 testis 5' read P
DB154407.1 Clone THYMU3032370 thymus 5' read
DB084161.1 Clone TESTI4031026 testis 5' read
DB078219.1 Clone TESTI4023014 testis 5' read P
DB157595.1 Clone THYMU3036715 thymus 5' read P
DB092764.1 Clone TESTI4042492 testis 5' read
DB206696.1 Clone TRACH2019092 trachea 5' read
DB141361.1 Clone THYMU3014742 thymus 5' read
DB097115.1 Clone TESTI4048277 testis 5' read P
DB371677.1 Clone OVARC1001223 ovary 3' read A
BF768671.1 epididymis P
BF772009.1 epididymis P
BF772441.1 epididymis P
BG110699.1 Clone IMAGE:4366964 bone 5' read
BF988677.1 placenta P
BF940524.1 Clone IMAGE:3436166 ovary 3' read
N22623.1 Clone IMAGE:253879 ear 3' read A
BF916326.1 uterus P
N23326.1 Clone IMAGE:267906 skin 3' read A
BG249723.1 Clone IMAGE:4414956 kidney 5' read A
BG257950.1 Clone IMAGE:4510225 uncharacterized tissue 5' read
BG259351.1 Clone IMAGE:4509390 uncharacterized tissue 5' read
AL529285.3 Clone CS0DD002YF12 uncharacterized tissue 3' read
AL529286.3 Clone CS0DD002YF12 uncharacterized tissue 5' read
AL537169.3 Clone CS0DF019YD12 brain 5' read
N29146.1 Clone IMAGE:264919 skin 5' read P
BG231763.1 Clone IMAGE:4143594 blood 3' read A
N34374.1 Clone IMAGE:271058 skin 3' read A
BG291571.1 Clone IMAGE:4514582 bladder 5' read
EC482608.1 prostate
EC544505.1 prostate
BG388757.1 Clone IMAGE:4522861 uncharacterized tissue 5' read
BF171964.1 blood
BG505812.1 Clone IMAGE:4072488 testis 5' read
BG541240.1 Clone IMAGE:4694721 lung 5' read
N51454.1 Clone IMAGE:282024 brain 3' read A
N53594.1 Clone IMAGE:282024 brain 5' read
BG676721.1 Clone IMAGE:4748081 skin 5' read
BI088505.1 Clone IMAGE:4994454 placenta 5' read P
BJ993015.1 Clone hmfn-0416 liver 5' read
BJ993016.1 Clone hmfn-0416 liver 3' read
N90713.1 Clone IMAGE:306393 lung 3' read A
BI493661.1 Clone IMAGE:2540889 ear 3' read A
BI493662.1 Clone IMAGE:2540889 ear 5' read
BI494312.1 Clone IMAGE:2538954 ear 3' read A
BI494313.1 Clone IMAGE:2538954 ear 5' read A
BM055021.1 Clone IMAGE:5674322 pancreas 3' read A
BM055298.1 Clone IMAGE:5674322 pancreas 5' read
BM263928.1 pancreas 3' read A
W20270.1 Clone IMAGE:306393 lung 5' read
BM452984.1 Clone IMAGE:5529583 uterus 5' read P
BM462451.1 Clone IMAGE:5518118 uterus 5' read A
BM463663.1 Clone IMAGE:5518522 uterus 5' read
BM475600.1 Clone IMAGE:5575631 uncharacterized tissue 5' read
BM669162.1 Clone UI-E-DX1-agy-b-10-0-UI eye 3' read A
BM678534.1 Clone UI-E-EO0-ahw-m-06-0-UI eye 3' read A
BM682186.1 Clone UI-E-EO1-aiw-n-12-0-UI eye 3' read A
W46368.1 Clone IMAGE:323817 skin 3' read A
W46194.1 Clone IMAGE:323817 skin 5' read P
W47579.1 Clone IMAGE:324348 skin 3' read
W47600.1 Clone IMAGE:324348 skin 5' read
BM722021.1 Clone UI-E-EO0-ahw-m-06-0-UI eye 5' read
BM729275.1 Clone UI-E-EO1-aiw-n-12-0-UI eye 5' read
BM769589.1 Clone S14K402-16-B03 stomach 5' read A
BM828143.1 Clone S9SNU601-49-B11 ascites 5' read
BM974097.1 Clone UI-CF-EC1-abz-j-03-0-UI lung 3' read A
BM974261.1 Clone UI-CF-EC1-aca-e-23-0-UI lung 3' read A
BM976591.1 Clone UI-CF-EN1-ada-o-05-0-UI lung 3' read A
AL698594.1 Clone DKFZp686H06109 muscle 5' read P
BQ015736.1 Clone IMAGE:5886770 connective tissue 3' read A
BQ029496.1 Clone IMAGE:5866874 connective tissue 3' read A
W92046.1 Clone IMAGE:415331 mixed 3' read A
W91904.1 Clone IMAGE:415331 mixed 5' read
BQ213095.1 Clone IMAGE:6063354 skin 5' read
BQ214953.1 Clone IMAGE:6064772 skin 5' read
BQ219821.1 Clone IMAGE:6020730 pancreas 5' read
BQ232180.1 Clone IMAGE:6015063 uncharacterized tissue 5' read P
AA026743.1 Clone IMAGE:469208 uterus 5' read
BQ433700.1 Clone IMAGE:6042021 uncharacterized tissue 5' read P
BQ438062.1 Clone IMAGE:6176151 uterus 5' read
BF926984.1 brain
BU161680.1 Clone IMAGE:6169634 eye 5' read
BU167426.1 Clone IMAGE:6170196 eye 5' read
BU180647.1 Clone IMAGE:6140170 eye 5' read
BU187665.1 Clone IMAGE:6143695 eye 5' read
BU160344.1 Clone IMAGE:6156978 skin 5' read P
BU177207.1 Clone IMAGE:6149343 skin 5' read P
BU189165.1 Clone IMAGE:6166082 skin 5' read
BU156391.1 Clone IMAGE:6173197 uterus 5' read P
BU162173.1 Clone IMAGE:6173523 uterus 5' read
BU193854.1 Clone IMAGE:6155366 uterus 5' read
BU508164.1 Clone IMAGE:6502197 uterus 5' read
BU533252.1 Clone IMAGE:6559528 mixed 5' read A
AA098915.1 Clone IMAGE:489539 uterus 3' read A
AA115480.1 Clone IMAGE:489975 uterus 3' read A
AA115459.1 Clone IMAGE:489975 uterus 5' read
FN159901.1 Clone 264172_3169_3333
FN071814.1 Clone 042605_1432_2379
FN053664.1 Clone 011002_2725_2113
AA150191.1 Clone IMAGE:491603 uterus 3' read A
BU607417.1 Clone UI-CF-FN0-aeu-f-24-0-UI lung 3' read A
BU608759.1 Clone UI-CF-FN0-aeq-c-10-0-UI lung 3' read A
AA227943.1 Clone IMAGE:667395 mixed 3' read A
AA227992.1 Clone IMAGE:667419 mixed 3' read A
BU676333.1 Clone UI-CF-DU1-aag-f-21-0-UI lung 3' read A
BU679446.1 Clone UI-CF-DU1-aau-h-20-0-UI lung 3' read A
AA235904.1 Clone IMAGE:687705 mixed 5' read
AA235905.1 Clone IMAGE:687705 mixed 3' read A
AA251375.1 Clone IMAGE:684752 lymph node 3' read A
AA251622.1 Clone IMAGE:684752 lymph node 5' read
CA311373.1 Clone UI-CF-FN0-aff-h-23-0-UI lung 3' read A
CA314233.1 Clone UI-CF-FN0-aez-f-15-0-UI lung 3' read A
CA397427.1 Clone cs90h11 eye 5' read
CA416373.1 Clone UI-H-FE0-bbv-h-07-0-UI bone 3' read A
CA429543.1 Clone UI-H-FH1-bfo-m-21-0-UI bone 3' read A
CA445247.1 Clone UI-H-ED0-axm-a-13-0-UI connective tissue 3' read A
CA449523.1 Clone UI-H-EI1-ayt-h-06-0-UI connective tissue 3' read A
AA332344.1 embryonic tissue 5' read
CA777868.1 Clone IMAGE:6217420 pancreas 3' read A
CA778132.1 Clone IMAGE:6217420 pancreas 5' read
AA285267.1 bone marrow 5' read
AA431856.1 Clone IMAGE:773628 embryonic tissue 5' read
AA431857.1 Clone IMAGE:773628 embryonic tissue 3' read A
AA442396.1 Clone IMAGE:758961 embryonic tissue 5' read
AA459219.1 Clone IMAGE:814263 lymph node 5' read
AA478586.1 Clone IMAGE:753589 mixed 3' read A
AA479323.1 Clone IMAGE:753589 mixed 5' read
AA479501.1 Clone IMAGE:754295 mixed 5' read
AA479502.1 Clone IMAGE:754295 mixed 3' read
AA479504.1 Clone IMAGE:754312 mixed 3' read A
AA533108.1 Clone IMAGE:992991 adrenal gland 3' read A
AA558320.1 Clone IMAGE:1042665 bone marrow
AA603028.1 Clone IMAGE:1118007 prostate 3' read A
AA612699.1 Clone IMAGE:1144986 intestine 3' read A
AA612709.1 Clone IMAGE:1144987 intestine 3' read A
AA630737.1 Clone IMAGE:856345 cervix 3' read A
AA633196.1 Clone IMAGE:1147950 intestine 3' read A
AA825604.1 Clone IMAGE:1372091 lymph node 3' read
AA857490.1 Clone IMAGE:1384860 ovary 3' read A
AA889448.1 Clone IMAGE:1403286 parathyroid 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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