> Coiled-coil domain containing 13 (CCDC13)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:2073193     UniGene Hs.604182     Homo sapiens (human)   CCDC13 Order cDNA clone, Links
Coiled-coil domain containing 13 (CCDC13)

Human protein-coding gene CCDC13. Represented by 51 ESTs from 25 cDNA libraries. EST representation biased toward adult. Corresponds to reference sequence NM_144719.3. [UniGene 2073193 - Hs.604182]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_653320.3 CCDC13 gene product H. sapiens 100.0 714
NP_082660.1 coiled-coil domain containing 13 M. musculus 79.1 708
XP_001918641.3 PREDICTED: coiled-coil domain-containing protein 13 D. rerio 50.8 266
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_530597.2 PREDICTED: coiled-coil domain-containing protein 13 isoform 2 P. troglodytes 99.3 714
XP_003894648.1 PREDICTED: coiled-coil domain-containing protein 13 P. anubis 95.8 714

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; eye; uncharacterized tissue; brain; mixed; adrenal gland; cervix; skin; thyroid; lung; muscle; ovary
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p22.1
UniSTS entry: Chr 3 D3S2783E
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AK058196.1 Homo sapiens cDNA FLJ25467 fis, clone TST09387 P
NM_144719.3 Homo sapiens coiled-coil domain containing 13 (CCDC13), mRNA PA
AK302859.1 Homo sapiens cDNA FLJ61498 complete cds, highly similar to Coiled-coil domain-containing protein 13 P
BC036050.1 Homo sapiens coiled-coil domain containing 13, mRNA (cDNA clone MGC:33372 IMAGE:5270468), complete cds PA

EST sequences (51)

AI478894.1 Clone IMAGE:2157595 mixed 3' read
BX478920.1 Clone DKFZp686P11206 muscle 5' read
Z43912.1 Clone c-1oa11 brain P
AW197713.1 Clone IMAGE:2701446 mixed 3' read
BX645838.1 Clone DKFZp781I1650 uncharacterized tissue 5' read P
AW295509.1 Clone IMAGE:2728219 uncharacterized tissue 3' read A
AW295529.1 Clone IMAGE:2728313 uncharacterized tissue 3' read A
CK300879.1 Clone UI-E-EJ1-aka-j-19-0-UI eye 3' read A
H09194.1 Clone IMAGE:46400 brain 5' read
CR747158.1 Clone IMAGp998I2111682_;_IMAGE:5270492 testis 5' read
BP197652.1 Clone ADG06523 adrenal gland 5' read P
BP369263.1 Clone TST01535 testis 5' read P
DA421171.1 Clone CERVX2000916 cervix 5' read P
DB019981.1 Clone TESTI1000566 testis 5' read P
DB337036.1 Clone TESTI2015031 testis 3' read
DB093868.1 Clone TESTI4043997 testis 5' read P
DB088248.1 Clone TESTI4036406 testis 5' read P
DB057301.1 Clone TESTI2049413 testis 5' read P
DB525043.1 Clone H013086J19 testis 3' read
DB459591.1 Clone H013086J19 testis 5' read
BG743171.1 Clone IMAGE:4779414 skin 5' read
BI000028.1 thyroid
BI463056.1 Clone IMAGE:5270492 testis 5' read P
BI463126.1 Clone IMAGE:5270468 testis 5' read P
BM664398.1 Clone UI-E-CL1-afa-f-13-0-UI eye 3' read A
BM673620.1 Clone UI-E-CL1-aes-e-02-0-UI eye 3' read A
BM692373.1 Clone UI-E-CL1-aes-e-02-0-UI eye 5' read P
BM696113.1 Clone UI-E-CL1-afa-f-13-0-UI eye 5' read
BM709726.1 Clone UI-E-CK1-aga-i-14-0-UI eye 5' read A
BM979349.1 Clone UI-CF-DU1-adr-e-20-0-UI lung 3' read PA
BQ189766.1 Clone UI-E-EJ1-aka-j-19-0-UI eye 5' read
FY213402.1 Clone DA307567_Ki_17 P
FY213654.1 Clone DA307567_Ki_17
FY213806.1 Clone DA307567_Ki_20 P
FY213983.1 Clone DA307567_Ki_21 P
FY210761.1 Clone DA307567_Ki_21 P
FY211374.1 Clone DA307567_Ki_20 P
FY211571.1 Clone DA307567_Ki_14 P
FY212209.1 Clone DA307567_Ki_14 P
BU683768.1 Clone UI-CF-EN0-acm-h-21-0-UI lung 3' read A
BU731772.1 Clone UI-E-CI1-afr-p-08-0-UI eye 3' read A
BU733675.1 Clone UI-E-CK1-aga-i-14-0-UI eye 3' read A
BU734065.1 Clone UI-E-CK1-agb-g-17-0-UI eye 3' read A
HY002880.1 Clone H04D010H22 testis
HY014479.1 Clone H04D049P11 testis P
HY022691.1 Clone H04D077B12 testis
HY040595.1 Clone H04D142B07 testis P
HY193508.1 Clone H04D032K08 testis
HY226738.1 Clone H04D142B07 testis
AA318095.1 eye 5' read
AA485602.1 Clone IMAGE:811047 ovary 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help