Syntrophin, gamma 2 (SNTG2)

Restricted Expression:

soft tissue/muscle tissue tumor [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

connective tissue; testis; mixed; brain; trachea; uncharacterized tissue; ovary

NCBI

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UGID:2064080 UniGene Hs.595069 Homo sapiens (human) SNTG2

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Syntrophin, gamma 2 (SNTG2)

Human protein-coding gene SNTG2. Represented by 43 ESTs from 13 cDNA libraries. EST representation biased toward soft tissue/muscle tissue tumor. Corresponds to reference sequence NM_018968.3. [UniGene 2064080 - Hs.595069]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_061841.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	SNTG2 gene product	H. sapiens	100.0	538
NP_766539.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Sntg2 gene product	M. musculus	87.6	538
NP_001087773.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	syntrophin, gamma 2	X. laevis	77.1	532
NP_001119899.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	gamma-2-syntrophin	D. rerio	73.4	526
Other hits (2 of 20) [Show all]		Species	Id(%)	Len(aa)
XP_001149987.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: gamma-2-syntrophin	P. troglodytes	99.1	428
XP_001095853.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: gamma-2-syntrophin isoform 1	M. mulatta	95.9	538

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	2
	Map position:	2p25.3

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_018968.3	Homo sapiens syntrophin, gamma 2 (SNTG2), mRNA	PA
AJ003029.1	Homo sapiens mRNA for syntrophin 5	PA
BC125251.1	Homo sapiens syntrophin, gamma 2, mRNA (cDNA clone MGC:133174 IMAGE:40025232), complete cds	P
BC035783.1	Homo sapiens syntrophin, gamma 2, mRNA (cDNA clone IMAGE:5589130), with apparent retained intron	PA

EST sequences (43)

AI393344.1	Clone IMAGE:2111626	mixed	3' read
AI808676.1	Clone IMAGE:2358627	mixed	3' read
Z43606.1	Clone c-1gb01	brain		P
Z39668.1	Clone c-1gb01	brain	3' read	A
AW592765.1	Clone IMAGE:2944509	mixed	3' read
AW594178.1	Clone IMAGE:2949411	uncharacterized tissue	3' read	A
BE044431.1	Clone IMAGE:3040327	mixed	3' read
BP368994.1	Clone TST00782	testis	5' read	P
BF092795.1		testis		P
DR731312.1	Clone MGC8.6.1.1.1.D07	mixed		P
DB350265.1	Clone TRACH3030197	trachea	3' read	A
DB446979.1	Clone H013028L02	testis	5' read	P
DB512131.1	Clone H013028L02	testis	3' read	A
BG182916.1		connective tissue
BG184489.1		connective tissue
BG184880.1		connective tissue
BG187738.1		connective tissue
BG188695.1		connective tissue
BG189209.1		connective tissue
BG193912.1		connective tissue
BG197933.1		connective tissue
BG202045.1		connective tissue
BG204508.1		connective tissue
BG204616.1		connective tissue
BG208326.1		connective tissue		P
BG208327.1		connective tissue
BG209790.1		connective tissue
BG212532.1		connective tissue
BG216682.1		connective tissue		A
BG216683.1		connective tissue
BM543795.1	Clone IMAGE:5589130	ovary	5' read	P
BM919250.1	Clone IMAGE:5748478	mixed	5' read	P
BQ375527.1		testis
U74665.1		brain
HY029094.1	Clone H04D100J22	testis		P
HY036923.1	Clone H04D127M22	testis
HY041686.1	Clone H04D146O14	testis		P
HY213509.1	Clone H04D100J22	testis		P
HY213925.1	Clone H04D101P22	testis		P
HY228258.1	Clone H04D146O14	testis		P
HY238549.1	Clone H04D180N22	testis		P
AA405993.1	Clone IMAGE:742985	testis	5' read
AA448072.1	Clone IMAGE:782672	testis	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria