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UGID:2061259     UniGene Hs.592248     Homo sapiens (human)   TAF9B
TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa (TAF9B)

Human protein-coding gene TAF9B. Represented by 210 ESTs from 120 cDNA libraries. Corresponds to reference sequence NM_015975.4. [UniGene 2061259 - Hs.592248]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001100881.1 PREDICTED: transcription initiation factor TFIID subunit 9B-like M. mulatta 100.0 250
XP_003917961.1 PREDICTED: transcription initiation factor TFIID subunit 9B isoform 1 P. anubis 100.0 250
XP_529052.2 PREDICTED: transcription initiation factor TFIID subunit 9B P. troglodytes 100.0 250
NP_057059.2 TAF9B gene product H. sapiens 100.0 250
NP_001001176.2 Taf9b gene product M. musculus 95.6 248
NP_001087960.1 uncharacterized protein LOC494643 X. laevis 86.6 253
NP_001037860.2 adenylate kinase isoenzyme 6 D. rerio 83.5 247
NP_523391.3 enhancer of yellow 1 D. melanogaster 54.6 183
Other hits (2 of 31) [Show all]SpeciesId(%)Len(aa)
XP_001502712.1 PREDICTED: transcription initiation factor TFIID subunit 9B-like E. caballus 98.8 254
XP_003135250.1 PREDICTED: transcription initiation factor TFIID subunit 9B-like S. scrofa 98.8 249

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; amniotic fluid; mouth; testis; bladder; heart; kidney; cervix; embryonic tissue; skin; uncharacterized tissue; liver; mixed; lung; placenta; pituitary gland; uterus; blood; eye; pharynx; mammary gland; pancreas; connective tissue; spleen; vascular; trachea; thymus; intestine; stomach; bone marrow; bone; ovary; prostate; salivary gland; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xq13.1-q21.1
UniSTS entry: Chr X STS-W61008 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BC071649.1 Homo sapiens TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa, mRNA (cDNA clone MGC:87820 IMAGE:5246715), complete cds PA
NM_015975.4 Homo sapiens TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa (TAF9B), mRNA PA
AF220509.1 Homo sapiens transcription associated factor TAFII31L mRNA, complete cds P
BC010350.1 Homo sapiens TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa, mRNA (cDNA clone MGC:13324 IMAGE:4276335), complete cds PA
BC009566.1 Homo sapiens TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa, mRNA (cDNA clone MGC:12251 IMAGE:3996687), complete cds PA
AK312579.1 Homo sapiens cDNA, FLJ92954, highly similar to Homo sapiens TAF9-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa (TAF9L), mRNA P
BC146952.1 Homo sapiens TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa, mRNA (cDNA clone MGC:182055 IMAGE:9056880), complete cds P
BC146960.1 Homo sapiens TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa, mRNA (cDNA clone MGC:182063 IMAGE:9056888), complete cds P

EST sequences (210)

AI185872.1 Clone IMAGE:1741912 lung 3' read A
CB159387.1 Clone L18POOL1n1-40-A05 liver 5' read
AI277265.1 Clone IMAGE:1893781 placenta 3' read A
AI632190.1 Clone IMAGE:2241294 uncharacterized tissue 3' read A
AU279555.1 Clone CHONS2000260 connective tissue 5' read P
AI696744.1 Clone IMAGE:2323082 pancreas 3' read A
AI702999.1 Clone IMAGE:2336586 lung 3' read A
AI741049.1 Clone IMAGE:2366182 mixed 3' read A
CB960241.1 Clone IMAGE:30344698 placenta 5' read P
AI814132.1 Clone IMAGE:2419221 prostate 3' read A
CB993408.1 Clone IMAGE:30336645 placenta 5' read P
BX324309.2 Clone CS0DC011YF05 uncharacterized tissue 3' read
BX324310.2 Clone CS0DC011YF05 uncharacterized tissue 5' read P
BX327449.1 Clone CS0DJ012YE06 blood 5' read P
BX329185.1 Clone CS0DJ012YE06 blood 3' read A
BX419889.2 Clone CS0DF021YF02 brain 5' read P
CB851416.1 Clone UI-CF-DU1-adr-g-11-0-UI lung 3' read P
CD243174.1 Clone IMAGE:30386003 pituitary gland 5' read P
BX458194.2 Clone CS0DA011YP06 uncharacterized tissue 5' read P
AL120867.1 Clone DKFZp762K192 skin 5' read
CD697666.1 pharynx
Z44714.1 Clone c-27f01 brain
Z40547.1 Clone c-27f01 brain 3' read A
AW337281.1 Clone IMAGE:2833635 pancreas 3' read A
AW339190.1 Clone IMAGE:2879384 pancreas 3' read
AW511468.1 Clone IMAGE:2806046 uterus 3' read A
AW749841.1 mammary gland
AL353980.1 Clone DKFZp762L143 skin 5' read
CK904926.1 Clone IMAGE:5674628 pancreas 3' read A
CN358351.1 embryonic tissue 5' read P
CN358352.1 embryonic tissue 5' read P
H06850.1 Clone IMAGE:44533 brain 3' read A
H06891.1 Clone IMAGE:44533 brain 5' read
BE079820.1 mammary gland P
CV027852.1 mixed 5' read P
BP243220.1 Clone HEP19228 liver 5' read
BP334165.1 Clone SLV05705 salivary gland 5' read P
BE301504.1 Clone IMAGE:3048109 cervix 3' read A
BP289070.1 Clone LNF01085 lung 5' read P
CX165231.1 Clone IMAGE:7468784 embryonic tissue 5' read P
CX166259.1 Clone IMAGE:7469936 embryonic tissue 5' read P
CX873526.1 Clone IMAGE:7488268 embryonic tissue 5' read P
BE813621.1 mammary gland P
R91728.1 Clone IMAGE:195490 mixed 5' read
DN992551.1 Clone TC114555 brain 5' read P
BF029150.1 Clone IMAGE:3996687 bladder 5' read P
DR156915.1 Clone IMAGE:7965563 embryonic tissue 5' read P
DR157379.1 Clone IMAGE:7966117 embryonic tissue 5' read P
DR157710.1 Clone IMAGE:7966559 embryonic tissue 5' read P
DR159207.1 Clone IMAGE:7968259 embryonic tissue 5' read P
BF082010.1 amniotic fluid
AV753725.2 Clone TPAACA05 pituitary gland 5' read P
BF110397.1 Clone IMAGE:3568196 lung 3' read A
BF664913.1 Clone IMAGE:4276335 brain 5' read P
DA171447.1 Clone BRAMY2033690 brain 5' read P
DA165488.1 Clone BRAMY2026528 brain 5' read P
DA165694.1 Clone BRAMY2026766 brain 5' read P
DA349095.1 Clone BRSSN2011173 brain 5' read P
DA239963.1 Clone BRAWH3037432 brain 5' read P
DA291802.1 Clone BRHIP2003483 brain 5' read P
DA252685.1 Clone BRCAN2002976 brain 5' read P
DA319161.1 Clone BRHIP3011239 brain 5' read P
DA031679.1 Clone ASTRO2016181 brain 5' read P
DA254563.1 Clone BRCAN2005259 brain 5' read P
DA294154.1 Clone BRHIP2006537 brain 5' read P
DA288343.1 Clone BRCOC2019851 brain 5' read P
DA177814.1 Clone BRAMY2041792 brain 5' read P
DA151284.1 Clone BRAMY2009266 brain 5' read P
DA178764.1 Clone BRAMY2043010 brain 5' read P
DA028067.1 Clone ASTRO2011718 brain 5' read P
DA152750.1 Clone BRAMY2011065 brain 5' read P
DA147076.1 Clone BRAMY2003994 brain 5' read P
DA343476.1 Clone BRSSN2003590 brain 5' read P
DA042740.1 Clone BLADE2004478 bladder 5' read P
DA298242.1 Clone BRHIP2011906 brain 5' read P
DA343768.1 Clone BRSSN2003974 brain 5' read P
DA037663.1 Clone BGGI11000623 brain 5' read P
DA155386.1 Clone BRAMY2014333 brain 5' read P
DA652992.1 Clone MESAN2007604 kidney 5' read P
DA496418.1 Clone FCBBF3009246 brain 5' read P
DA614330.1 Clone IMR322013242 brain 5' read P
DA497053.1 Clone FCBBF3010047 brain 5' read P
DA497107.1 Clone FCBBF3010116 brain 5' read P
DA510316.1 Clone FCBBF3027058 brain 5' read P
DA510428.1 Clone FCBBF3027194 brain 5' read P
DA511468.1 Clone FCBBF3028564 brain 5' read P
DA578839.1 Clone HHDPC2006966 skin 5' read P
DA397472.1 Clone BRTHA2037662 brain 5' read P
DA508970.1 Clone FCBBF3025384 brain 5' read P
DA521756.1 Clone FEBRA2011985 brain 5' read P
DA483171.1 Clone FCBBF1000218 brain 5' read P
DA563687.1 Clone HEART2005637 heart 5' read P
DA452935.1 Clone CTONG2025729 mouth 5' read P
DA570751.1 Clone HEMBA1005369 embryonic tissue 5' read
DA453282.1 Clone CTONG2026156 mouth 5' read P
T31473.1 embryonic tissue 5' read
DA637373.1 Clone LIVER2000383 liver 5' read P
DA637410.1 Clone LIVER2000461 liver 5' read P
DA487439.1 Clone FCBBF2005392 brain 5' read P
DA533174.1 Clone FEBRA2027034 brain 5' read P
DA494896.1 Clone FCBBF3007326 brain 5' read P
DA527182.1 Clone FEBRA2019264 brain 5' read P
DA351769.1 Clone BRSSN2014846 brain 5' read P
DA731030.1 Clone NT2RM4001598 testis 5' read
DA731078.1 Clone NT2RM4001727 testis 5' read P
DA731135.1 Clone NT2RM4001868 testis 5' read
DA731401.1 Clone NT2RM4002579 testis 5' read
DA733175.1 Clone NT2RP2002352 testis 5' read P
DA845207.1 Clone PLACE6013335 placenta 5' read P
DA740144.1 Clone NT2RP7002240 testis 5' read P
DA740807.1 Clone NT2RP7003241 testis 5' read P
DA728096.1 Clone NT2RM2000744 testis 5' read
DA734762.1 Clone NT2RP2005921 testis 5' read P
DA958118.1 Clone SPLEN2037660 spleen 5' read P
DA775958.1 Clone OCBBF2009997 brain 5' read P
DA736563.1 Clone NT2RP3003737 testis 5' read P
DA737193.1 Clone NT2RP4000555 testis 5' read P
DA888703.1 Clone PUAEN2009494 vascular 5' read
DA778446.1 Clone OCBBF2013110 brain 5' read P
DA713804.1 Clone NT2RI2020516 5' read P
DA707402.1 Clone NT2RI2011832 5' read P
DA747694.1 Clone NT2RP7012913 testis 5' read P
DB369073.1 Clone NT2RP3003737 testis 3' read A
DB270833.1 Clone UTERU2032429 uterus 5' read
DB265253.1 Clone UTERU2024461 uterus 5' read P
DB384540.1 Clone Y79AA1001579 eye 3' read A
DB196166.1 Clone TRACH2002487 trachea 5' read P
DB282102.1 Clone UTERU3009260 uterus 5' read P
DB204085.1 Clone TRACH2015241 trachea 5' read P
DB363072.1 Clone NT2RM4001598 testis 3' read A
DB363143.1 Clone NT2RM4001727 testis 3' read A
DB363210.1 Clone NT2RM4001868 testis 3' read A
DB363562.1 Clone NT2RM4002579 testis 3' read A
DB357546.1 Clone HEMBA1005369 embryonic tissue 3' read A
DB135879.1 Clone THYMU3006983 thymus 5' read P
DB209895.1 Clone TRACH2022981 trachea 5' read P
DB294441.1 Clone Y79AA1001579 eye 5' read
DB366905.1 Clone NT2RP2005921 testis 3' read A
DW419142.1 liver P
BG032858.1 Clone IMAGE:4401896 mammary gland 5' read P
BG034161.1 Clone IMAGE:4403714 mammary gland 5' read
BG034250.1 Clone IMAGE:4403907 mammary gland 5' read
AL521603.3 Clone CS0DB003YJ03 uncharacterized tissue 5' read P
AL525008.3 Clone CS0DC005YK17 uncharacterized tissue 5' read P
AL525253.3 Clone CS0DC011YO19 uncharacterized tissue 3' read
AL525294.3 Clone CS0DC011YO19 uncharacterized tissue 5' read P
N27532.1 Clone IMAGE:269960 skin 3' read A
AL559343.3 Clone CS0DJ012YE06 blood 5' read P
N30567.1 Clone IMAGE:257190 placenta 3' read A
N30842.1 Clone IMAGE:257573 placenta 3' read A
N34647.1 Clone IMAGE:271287 skin 3' read A
N36518.1 Clone IMAGE:268491 skin 5' read P
N44592.1 Clone IMAGE:271287 skin 5' read
BG569325.1 Clone IMAGE:4723038 liver 5' read P
N49777.1 Clone IMAGE:282403 brain 3' read A
N62958.1 Clone IMAGE:289711 brain 3' read A
BG942148.1 Clone ax21f11 blood A
BG943369.1 Clone ax36g12 blood P
BG702265.1 Clone IMAGE:4816218 brain 5' read P
BG704321.1 Clone IMAGE:4820051 brain 5' read P
AL598675.1 Clone DKFZp313O0821 uncharacterized tissue 5' read P
BI489913.1 Clone IMAGE:5172857 mixed 5' read P
EL952650.1 eye 5' read A
BI544376.1 Clone IMAGE:5284123 brain 5' read P
BI756467.1 Clone IMAGE:5199572 brain 5' read P
BI824030.1 Clone IMAGE:5179810 mixed 5' read P
BI833027.1 Clone IMAGE:5229843 mixed 5' read P
BI916452.1 Clone IMAGE:5246715 brain 5' read P
BM055081.1 Clone IMAGE:5674628 pancreas 3' read A
BM457189.1 Clone IMAGE:5583469 uncharacterized tissue 5' read P
BM549188.1 Clone IMAGE:5548473 skin 5' read P
BM557863.1 Clone IMAGE:5740138 intestine 5' read P
BM561697.1 Clone IMAGE:5739832 intestine 5' read A
BM709654.1 Clone UI-E-CK1-agb-i-08-0-UI eye 5' read A
BM740418.1 Clone S5SNU484-7-G09 stomach 5' read
BM758398.1 Clone S5SNU484-14-D05 stomach 5' read
BM800571.1 Clone IMAGE:5535096 uterus 5' read P
W61008.1 Clone IMAGE:342045 heart 3' read A
W68355.1 Clone IMAGE:342577 heart 3' read A
BM918870.1 Clone IMAGE:5747963 mixed 5' read P
BM928179.1 Clone IMAGE:5770043 brain 5' read P
BM990587.1 Clone IMAGE:5862456 lung 3' read A
BQ004886.1 Clone IMAGE:5842047 connective tissue 3' read A
BQ018825.1 Clone IMAGE:5891022 connective tissue 3' read A
BQ072677.1 Clone IMAGE:5756144 blood 5' read P
BQ230355.1 Clone IMAGE:6048593 skin 5' read P
BQ423887.1 Clone IMAGE:6157803 skin 5' read
BQ425260.1 Clone IMAGE:6154823 eye 5' read P
BM147868.1 Clone TCAAP1534 bone marrow
AA053385.1 Clone IMAGE:381080 eye 5' read P
AA054602.1 Clone IMAGE:381078 eye 3' read A
BU160638.1 Clone IMAGE:6147425 skin 5' read
BU156819.1 Clone IMAGE:6174150 uterus 5' read P
BU179089.1 Clone IMAGE:6173718 uterus 5' read
C17643.1 Clone 550F03 placenta 5' read
AA193410.1 Clone IMAGE:666074 mixed 3' read A
AA204916.1 Clone IMAGE:646102 testis 5' read P
BU734146.1 Clone UI-E-CK1-agb-i-08-0-UI eye 3' read A
BU942145.1 Clone IMAGE:6714692 mixed 5' read P
HY050377.1 Clone H04D177G16 testis P
CA418464.1 Clone UI-H-EZ1-bbc-o-18-0-UI bone 3' read A
AA346718.1 heart 5' read P
AA432177.1 Clone IMAGE:781679 testis 3' read A
AA457152.1 Clone IMAGE:810492 ovary 3' read A
AA503204.1 Clone IMAGE:900272 intestine 3' read A
AA480053.1 Clone IMAGE:756193 ovary 3' read A
AA480061.1 Clone IMAGE:756217 ovary 3' read A
AA688236.1 Clone IMAGE:1220463 prostate 3' read A
AA730103.1 Clone IMAGE:1258346 uncharacterized tissue 3' read A
AA811522.1 Clone IMAGE:1334293 lymph node 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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