Family with sequence similarity 86, member A pseudogene (FAM86EP)

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UGID:2060731 UniGene Hs.591720 Homo sapiens (human) FAM86EP

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Family with sequence similarity 86, member A pseudogene (FAM86EP)

Human pseudo gene FAM86EP. Represented by 32 ESTs from 29 cDNA libraries. Corresponds to reference sequence NR_024253.1. [UniGene 2060731 - Hs.591720]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_001181768.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	protein FAM86A	M. mulatta	89.6	212
XP_003916551.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein FAM86A isoform 2	P. anubis	89.6	212
NP_963892.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	FAM86A gene product	H. sapiens	88.7	212
NP_081722.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Fam86 gene product	M. musculus	64.0	211
NP_001090098.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	uncharacterized protein LOC735173	X. laevis	45.2	219
Other hits (2 of 16) [Show all]		Species	Id(%)	Len(aa)
XP_003950352.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: putative protein FAM86B-like 1-like	P. troglodytes	85.9	213
XP_004020807.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: protein FAM86A isoform 2	O. aries	70.3	222

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	eye; pancreas; pituitary gland; liver; ovary; embryonic tissue; kidney; uncharacterized tissue; intestine; brain; uterus; connective tissue; adrenal gland; testis; mixed; mammary gland; thyroid; prostate

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	4
Map position:	4p16.3
UniSTS entry:	Chr 11	SB153__6903
UniSTS entry:	Chr 11	D16S2651

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC044637.1	Homo sapiens hypothetical protein LOC348926, mRNA (cDNA clone IMAGE:4546485), partial cds	PA
	NR_024253.1	Homo sapiens family with sequence similarity 86, member E, pseudogene (FAM86EP), non-coding RNA	PA

EST sequences (32)

CB158009.1	Clone L18POOL1n1-6-H11	liver	5' read
CB154390.1	Clone B2N807043-25-B02	brain	5' read
AI868462.1	Clone IMAGE:2068135	mixed	3' read
CD106069.1	Clone IMAGE:30367144	pituitary gland	5' read	P
AI982825.1	Clone IMAGE:2510315	pancreas	3' read	A
CD674875.1	Clone fs16d02	eye	5' read
AW589478.1	Clone IMAGE:2682458	uterus	3' read	A
AW886807.1		ovary
CN481473.1	Clone hw08b08	eye	5' read
CN271531.1		embryonic tissue	5' read
BE273507.1	Clone IMAGE:3507130	kidney	5' read
BE550593.1	Clone IMAGE:3220195	uncharacterized tissue	3' read
AV654654.1	Clone GLCDYB02	liver	3' read
BE899479.1	Clone IMAGE:3952408	ovary	5' read
AW613304.1	Clone IMAGE:2957214	intestine	3' read	A
BF982858.1	Clone IMAGE:4396852	intestine	5' read
DB543730.1	Clone H023065D02	brain	3' read	A
BG328304.1	Clone IMAGE:4546485	intestine	5' read	P
BG337782.1	Clone IMAGE:4553054	uterus	5' read	P
BG953452.1		intestine
BI771415.1	Clone IMAGE:5208540	mixed	5' read	P
BI856647.1	Clone IMAGE:5394432	mammary gland	5' read
BM718734.1	Clone UI-E-EO1-ajc-e-08-0-UI	eye	5' read
BQ019849.1	Clone IMAGE:5827609	connective tissue	3' read	A
BQ067985.1	Clone IMAGE:5768989	brain	5' read	P
BU742387.1	Clone UI-E-EO1-ajc-e-08-0-UI	eye	3' read	A
AA319841.1		adrenal gland	5' read
AA417194.1	Clone IMAGE:730922	testis	3' read
AA421090.1	Clone IMAGE:730920	testis	5' read
AA421091.1	Clone IMAGE:730922	testis	5' read
AA493605.1	Clone IMAGE:943012	thyroid
AA650241.1	Clone IMAGE:1191199	prostate		A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria