> Zinc finger protein 397 (ZNF397)
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UGID:2060072     UniGene Hs.591061     Homo sapiens (human)   ZNF397 Order cDNA clone, Links
Zinc finger protein 397 (ZNF397)

Human protein-coding gene ZNF397. Represented by 171 ESTs from 98 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 2060072 - Hs.591061]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_512090.3 PREDICTED: zinc finger protein 397 P. troglodytes 100.0 533
NP_001128650.1 ZNF397 gene product H. sapiens 100.0 533
NP_081283.2 zinc finger protein 397 M. musculus 88.6 526
XP_003198369.1 PREDICTED: zinc finger protein 180-like D. rerio 56.1 262
NP_001090237.1 zinc finger protein 16 X. laevis 50.5 277
NP_001014498.1 CG1832, isoform B D. melanogaster 48.4 186
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_003914372.1 PREDICTED: zinc finger protein 397 P. anubis 98.8 347
XP_002800954.1 PREDICTED: zinc finger protein 397-like M. mulatta 98.1 532

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; placenta; skin; lung; umbilical cord; liver; kidney; mammary gland; bone marrow; spleen; testis; uncharacterized tissue; stomach; lymph node; eye; embryonic tissue; cervix; pancreas; uterus; esophagus; connective tissue; trachea; thymus; heart; muscle; bladder; bone; blood; thyroid; nerve; peritoneum; prostate
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 18
Map position: 18q12.2
UniSTS entry: Chr 18 SHGC-132945
UniSTS entry: Chr 18 RH69802
UniSTS entry: SHGC-57666
UniSTS entry: Chr 1 G35510
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AK123116.1 Homo sapiens cDNA FLJ41121 fis, clone BRACE2012510
BC006172.1 Homo sapiens zinc finger protein 397, mRNA (cDNA clone MGC:13250 IMAGE:4053312), complete cds PA
NM_032347.2 Homo sapiens zinc finger protein 397 (ZNF397), transcript variant 2, mRNA PA
AK027384.1 Homo sapiens cDNA FLJ14478 fis, clone MAMMA1001633, moderately similar to ZINC FINGER PROTEIN 165 P
AK311533.1 Homo sapiens cDNA, FLJ18575 P
AF533250.2 Homo sapiens zinc finger protein (ZNF397) mRNA, complete cds P
NM_001135178.2 Homo sapiens zinc finger protein 397 (ZNF397), transcript variant 1, mRNA P
AY157641.2 Homo sapiens zinc finger protein 397 truncated isoform (ZNF397) mRNA, complete cds P

EST sequences (171)

AA923414.1 Clone IMAGE:1526923 mixed 3' read A
AI081685.1 Clone IMAGE:1653212 mixed 3' read P
AI096382.1 Clone IMAGE:1707485 heart 3' read
BX090701.1 Clone IMAGp998E09134_;_IMAGE:129008 mixed P
AI217495.1 Clone IMAGE:1845240 mixed 3' read
AI244547.1 Clone IMAGE:1868957 kidney 3' read A
AI247860.1 Clone IMAGE:1848859 mixed 3' read A
AI362955.1 Clone IMAGE:2019021 brain 3' read P
AI538081.1 Clone IMAGE:2179466 uterus 3' read
AI699375.1 Clone IMAGE:2301419 mixed 3' read
AI799121.1 Clone IMAGE:2349304 mixed 3' read
AI824163.1 Clone IMAGE:2402138 kidney 3' read A
CB959078.1 Clone IMAGE:30353793 mixed 5' read P
CB988334.1 Clone IMAGE:30341326 placenta 5' read
CB988721.1 Clone IMAGE:30344661 placenta 5' read
CB989223.1 Clone IMAGE:30341325 placenta 5' read
CB989552.1 Clone IMAGE:30341159 placenta 5' read
CB989898.1 Clone IMAGE:30341706 placenta 5' read
CB989979.1 Clone IMAGE:30347767 placenta 5' read
CB960248.1 Clone IMAGE:30344658 placenta 5' read
CD109433.1 Clone IMAGE:30347526 placenta 5' read
CD109801.1 Clone IMAGE:30346865 placenta 5' read
BX364252.2 Clone CS0DL011YG16 uncharacterized tissue 5' read P
BX385438.2 Clone CS0DL011YG18 uncharacterized tissue 5' read P
BX333675.2 Clone CS0DC029YI21 uncharacterized tissue 5' read P
AI880221.1 Clone IMAGE:1957188 brain 3' read
BX441885.2 Clone CS0DF023YG07 brain 5' read P
AI989588.1 Clone IMAGE:2499130 uncharacterized tissue 3' read
BX471075.1 Clone DKFZp686E12124 muscle 5' read P
BX485039.1 Clone DKFZp686I02245 muscle 5' read
AW043881.1 Clone IMAGE:2554508 mixed 3' read A
AW070492.1 Clone IMAGE:2567257 mixed 3' read A
AW119198.1 Clone IMAGE:2604850 mixed 3' read
CF142949.1 Clone IMAGE:3103202 lymph node 5' read
CF143755.1 Clone IMAGE:3103202 lymph node 5' read
CF143903.1 Clone IMAGE:3103150 lymph node 5' read
AU253808.1 Clone Nbla11097 brain 5' read P
CF528409.1 Clone UI-1-BC0-ael-d-04-0-UI placenta 3' read PA
CF594063.1 Clone IMAGE:30528117 placenta 5' read
AW268984.1 Clone IMAGE:2815429 mixed 3' read
AW291411.1 Clone IMAGE:2723836 uncharacterized tissue 3' read A
CF993933.1 Clone IMAGE:30520139 placenta 5' read
CF995166.1 Clone IMAGE:30527751 placenta 5' read P
AW450538.1 Clone IMAGE:2734863 uncharacterized tissue 3' read A
AW500982.1 Clone IMAGE:3073668 lymph node 5' read
AW501018.1 Clone IMAGE:3072830 lymph node 5' read
AW572762.1 Clone IMAGE:2911081 mixed 3' read A
AW673026.1 Clone IMAGE:2901064 cervix 3' read
CK825621.1 Clone IMAGE:5781480 pancreas 3' read P
AW901168.1 brain
CN261696.1 embryonic tissue 5' read P
CN261697.1 embryonic tissue 5' read P
CN261698.1 embryonic tissue 5' read P
CN261699.1 embryonic tissue 5' read P
CN355372.1 embryonic tissue 5' read
CN357797.1 embryonic tissue 5' read P
CN357798.1 embryonic tissue 5' read P
AW966096.1 uncharacterized tissue P
BE003964.1 mammary gland
CV026989.1 mixed 5' read P
BP193945.1 Clone ADB03836 brain 5' read P
BP194017.1 Clone ADB04036 brain 5' read P
BP343672.1 Clone STM08122 stomach 5' read P
BP375042.1 Clone UBA12687 umbilical cord 5' read P
BP380094.1 Clone WMD08515 uterus 5' read P
BE349487.1 Clone IMAGE:3150826 skin 3' read
CV395688.1 lung
CV571927.1 Clone od18h08 eye 5' read P
BE536456.1 Clone IMAGE:3450884 placenta 5' read
AV653992.1 Clone GLCDQG08 liver 3' read P
BE709979.1 thyroid P
BE793918.1 Clone IMAGE:3946891 lung 5' read P
BE810292.1 uncharacterized tissue P
AV683120.1 Clone GKCFKF07 liver 5' read P
AV687403.1 Clone GKCFLF07 liver 5' read P
AV689461.1 Clone GKCFMD07 liver 5' read P
AV690758.1 Clone GKCFJB04 liver 5' read
AV693738.1 Clone GKCFND10 liver 5' read
DR002621.1 Clone TC105369 brain 5' read P
BE940047.1 uterus
AV760100.1 Clone MDSCDA09 bone marrow 5' read
AV762512.1 Clone MDSCDD05 bone marrow 5' read P
BF127644.1 Clone IMAGE:4053312 uterus 5' read P
DA274213.1 Clone BRCOC2000515 brain 5' read P
DA052100.1 Clone BNGH42007248 brain 5' read P
DA348814.1 Clone BRSSN2010778 brain 5' read P
DA276680.1 Clone BRCOC2003753 brain 5' read P
DA175688.1 Clone BRAMY2039097 brain 5' read P
DA190440.1 Clone BRAMY3012845 brain 5' read P
DA040857.1 Clone BLADE2002126 bladder 5' read P
DA154897.1 Clone BRAMY2013712 brain 5' read P
DA083806.1 Clone BRACE2037742 brain 5' read
DA646666.1 Clone MAMMA1001633 mammary gland 5' read P
DA607577.1 Clone IMR322004830 brain 5' read P
DA662128.1 Clone MESTC2000160 uncharacterized tissue 5' read P
DA623659.1 Clone KIDNE2003223 kidney 5' read P
DA508011.1 Clone FCBBF3024183 brain 5' read
DA634473.1 Clone KIDNE2016375 kidney 5' read P
DA484396.1 Clone FCBBF2001040 brain 5' read P
BF061611.1 Clone IMAGE:3389911 mixed 3' read
DA492593.1 Clone FCBBF3004335 brain 5' read P
DA953846.1 Clone SPLEN2031941 spleen 5' read P
DA806122.1 Clone OCBBF3021437 brain 5' read
DB047444.1 Clone TESTI2036238 testis 5' read P
DA934357.1 Clone SPLEN2005119 spleen 5' read
DB048575.1 Clone TESTI2037638 testis 5' read
DB015250.1 Clone TESOP2004254 esophagus 5' read P
DA935622.1 Clone SPLEN2007251 spleen 5' read P
DA752774.1 Clone NT2RP7018873 testis 5' read P
DA749260.1 Clone NT2RP7014754 testis 5' read P
DA979897.1 Clone SYNOV2011514 connective tissue 5' read P
DB297152.1 Clone BRACE2012510 brain 3' read A
DB232783.1 Clone TRACH3026785 trachea 5' read
DB232803.1 Clone TRACH3026809 trachea 5' read
DB116492.1 Clone THYMU2022775 thymus 5' read
DB162149.1 Clone THYMU3042966 thymus 5' read
DB308533.1 Clone BRHIP3001083 brain 3' read A
DB119741.1 Clone THYMU2027526 thymus 5' read P
DB361395.1 Clone MAMMA1001633 mammary gland 3' read
DB087475.1 Clone TESTI4035397 testis 5' read P
DB253043.1 Clone UTERU2007500 uterus 5' read
DB110916.1 Clone THYMU2014254 thymus 5' read P
DB105815.1 Clone THYMU2006772 thymus 5' read P
H92001.1 Clone IMAGE:221331 eye 5' read P
BG027325.1 Clone IMAGE:4390881 bone 5' read P
BF931867.1 brain P
BF936009.1 brain
BF885076.1 testis P
DT216632.1 brain P
DT217265.1 brain
BI023795.1 blood P
ES310252.1 skin P
ES312400.1 skin 5' read
BI334756.1 Clone IMAGE:5141893 cervix 5' read P
BI772202.1 Clone IMAGE:5205517 mixed 5' read P
CU449866.1 skin
BM718848.1 Clone UI-E-EO1-ajc-j-17-0-UI eye 5' read P
W76537.1 Clone IMAGE:345019 heart 3' read A
BM975019.1 Clone UI-CF-EC1-acf-b-11-0-UI lung 3' read PA
W86091.1 Clone IMAGE:416298 mixed 3' read
AL711536.1 Clone DKFZp686F2383 muscle 5' read P
BQ185707.1 Clone UI-E-EJ1-ajp-l-06-0-UI eye 3' read A
BQ188266.1 Clone UI-E-EJ1-ajp-l-06-0-UI eye 5' read A
BQ268704.1 Clone IMAGE:5781480 pancreas 3' read
BQ268976.1 Clone IMAGE:5781480 pancreas 5' read P
BQ337190.1 blood
BQ376154.1 testis P
BQ376259.1 testis
BQ376329.1 testis P
BQ376333.1 testis
BQ376351.1 testis
BQ718552.1 Clone IMAGE:6193093 nerve 5' read
BQ900619.1 Clone IMAGE:6377471 brain 5' read P
AA074620.1 Clone IMAGE:366093 heart 3' read
AA082541.1 Clone IMAGE:366093 heart 5' read
FN089177.1 Clone 088162_1348_2658
FN098106.1 Clone 113062_1121_0747
AA323184.1 brain 5' read
AA325908.1 brain 5' read
AA333315.1 embryonic tissue 5' read
AA333417.1 embryonic tissue 5' read
AA346152.1 peritoneum 3' read
AA665286.1 Clone IMAGE:1205582 prostate
AA744022.1 Clone IMAGE:1276280 uncharacterized tissue
AA744306.1 Clone IMAGE:1275631 uncharacterized tissue
AA744319.1 Clone IMAGE:1275670 uncharacterized tissue
AA744343.1 Clone IMAGE:1276048 uncharacterized tissue
AA757361.1 Clone IMAGE:1327082 mixed 3' read A
AA805259.1 Clone IMAGE:1338296 lymph node 3' read A
R10367.1 Clone IMAGE:129008 mixed 3' read
AA936261.1 Clone IMAGE:1562491 mixed 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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