> HMG box domain containing 4 (HMGXB4)
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UGID:1957604     UniGene Hs.588815     Homo sapiens (human)   HMGXB4 Order cDNA clone, Links
HMG box domain containing 4 (HMGXB4)

Human protein-coding gene HMGXB4. Represented by 278 ESTs from 142 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 1957604 - Hs.588815]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001003681.1 HMGXB4 gene product H. sapiens 100.0 600
XP_515098.2 PREDICTED: HMG domain-containing protein 4 isoform 4 P. troglodytes 99.8 600
XP_001113091.1 PREDICTED: HMG domain-containing protein 4-like M. mulatta 99.5 600
NP_821136.1 HMG domain-containing protein 4 M. musculus 92.8 593
NP_001082746.1 HMG box-containing protein 4 X. laevis 69.0 553
NP_001120984.1 HMG domain-containing protein 4 D. rerio 60.9 623
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_003361315.1 PREDICTED: HMG domain-containing protein 4-like, partial S. scrofa 99.5 195
XP_003905517.1 PREDICTED: LOW QUALITY PROTEIN: HMG domain-containing protein 4 P. anubis 99.3 617

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; liver; embryonic tissue; lung; placenta; skin; testis; brain; thyroid; eye; pharynx; intestine; prostate; ovary; mixed; kidney; stomach; uterus; adrenal gland; ear; ascites; spleen; nerve; bone; muscle; mammary gland; connective tissue; pancreas; trachea; blood; heart; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q13.1
UniSTS entry: Chr 22 RH91140
UniSTS entry: Chr 22 MARC_17057-17058:1023803570:1
UniSTS entry: Chr 22 MARC_16659-16660:1017782419:3
UniSTS entry: Chr 7 RH67899 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

AJ010069.1 Homo sapiens mRNA for HMGBCG protein P
AJ010070.1 Homo sapiens mRNA encompasing THC211630 P
AL079310.1 Novel human gene mapping to chomosome 22 P
BC052624.1 Homo sapiens HMG box domain containing 4, mRNA (cDNA clone IMAGE:6574134), partial cds PA
BC062413.1 Homo sapiens HMG box domain containing 4, mRNA (cDNA clone IMAGE:6202719), partial cds PA
CR456504.1 Homo sapiens HMG2L1 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.HMG2L1.V4) P
NM_001003681.2 Homo sapiens HMG box domain containing 4 (HMGXB4), transcript variant 1, mRNA PA
BC080611.1 Homo sapiens high-mobility group protein 2-like 1, mRNA (cDNA clone IMAGE:5802064) PA
BC111373.1 Homo sapiens HMG box domain containing 4, mRNA (cDNA clone IMAGE:7475493), partial cds PA
BC104754.1 Homo sapiens HMG box domain containing 4, mRNA (cDNA clone MGC:132414 IMAGE:8143757), complete cds P
BC104756.1 Homo sapiens HMG box domain containing 4, mRNA (cDNA clone MGC:132416 IMAGE:8143759), complete cds P
AK299833.1 Homo sapiens cDNA FLJ60863 complete cds, highly similar to High mobility group protein 2-like 1 P
BC033783.2 Homo sapiens high-mobility group protein 2-like 1, mRNA (cDNA clone IMAGE:4478964), partial cds PA
BC025303.2 Homo sapiens HMG box domain containing 4, mRNA (cDNA clone IMAGE:3949218), partial cds PA
BC017326.2 Homo sapiens HMG box domain containing 4, mRNA (cDNA clone IMAGE:4549441), partial cds PA
BC011723.2 Homo sapiens high-mobility group protein 2-like 1, mRNA (cDNA clone IMAGE:4299753), partial cds PA
BC004194.2 Homo sapiens HMG box domain containing 4, mRNA (cDNA clone IMAGE:3528436), partial cds PA
NR_027780.1 Homo sapiens HMG box domain containing 4 (HMGXB4), transcript variant 2, non-coding RNA PA
BC040447.1 Homo sapiens cDNA clone IMAGE:4399221, containing frame-shift errors PA

EST sequences (278)

AI015842.1 Clone IMAGE:1622240 embryonic tissue 3' read P
AI150478.1 Clone IMAGE:1752072 testis 3' read P
AI151182.1 Clone IMAGE:1715266 placenta 3' read A
BX102029.1 Clone IMAGp998K11731_;_IMAGE:323074 skin
AI188726.1 Clone IMAGE:1723889 placenta 3' read A
AI206941.1 Clone IMAGE:1942891 uncharacterized tissue 3' read P
AI204349.1 Clone IMAGE:1754247 testis 3' read
CB119482.1 Clone L8SCK0-25-E07 liver 5' read
CB115052.1 Clone L10ChoCK0-4-G06 liver 5' read
AI203042.1 Clone IMAGE:1942698 uncharacterized tissue 3' read A
AI288320.1 Clone IMAGE:1988289 uterus 3' read A
AI337114.1 Clone IMAGE:2009581 uncharacterized tissue 3' read P
AI339316.1 Clone IMAGE:1946333 uncharacterized tissue 3' read PA
AI341149.1 Clone IMAGE:2009699 uncharacterized tissue 3' read A
R38922.1 Clone IMAGE:24834 brain 3' read A
AI351785.1 Clone IMAGE:1947069 uncharacterized tissue 3' read
AI359479.1 Clone IMAGE:2010140 uncharacterized tissue 3' read P
AI365200.1 Clone IMAGE:2010459 uncharacterized tissue 3' read
AI376174.1 Clone IMAGE:2048404 embryonic tissue 3' read P
AI376626.1 Clone IMAGE:2090839 mixed 3' read
AI393560.1 Clone IMAGE:2111816 mixed 3' read
AI453696.1 Clone IMAGE:2143861 pancreas 3' read A
AI475074.1 Clone IMAGE:2162782 brain 3' read PA
AI471703.1 Clone IMAGE:2155248 intestine 3' read A
AI610682.1 Clone IMAGE:2188087 stomach 3' read P
AI650601.1 Clone IMAGE:2304422 uncharacterized tissue 3' read P
AI655211.1 Clone IMAGE:2309506 uncharacterized tissue 3' read P
AI656803.1 Clone IMAGE:2244568 uncharacterized tissue 3' read P
AI686302.1 Clone IMAGE:2249096 prostate 3' read
AI693464.1 Clone IMAGE:2336547 lung 3' read A
CB242414.1 Clone UI-CF-FN0-agc-j-09-0-UI lung 3' read PA
AI796435.1 Clone IMAGE:2403158 kidney 3' read
CB306267.1 Clone UI-CF-EN1-aek-o-20-0-UI lung 3' read A
BX283864.1 Clone IMAGp958N161996_;_IMAGE:5477967 brain P
CB529335.1 Clone UI-H-FT2-bjf-f-14-0-UI lung 3' read PA
AI859547.1 Clone IMAGE:2435815 uterus 3' read
AI373759.1 Clone IMAGE:2030712 kidney 3' read P
Z41993.1 Clone c-05b10 brain
Z38278.1 Clone c-05b10 brain 3' read A
CB991207.1 Clone IMAGE:30339345 placenta 5' read
BX342535.2 Clone CS0DL003YM03 uncharacterized tissue 5' read P
BX394365.2 Clone CS0DC014YM20 uncharacterized tissue 3' read A
BX333351.2 Clone CS0DC024YM19 uncharacterized tissue 3' read P
BX333352.2 Clone CS0DC024YM19 uncharacterized tissue 5' read PA
BX347574.2 Clone CS0DC014YM20 uncharacterized tissue 3' read
BX389224.2 Clone CS0DC014YM20 uncharacterized tissue 5' read P
BX389225.2 Clone CS0DC014YM20 uncharacterized tissue 5' read P
BX394366.2 Clone CS0DC014YM20 uncharacterized tissue 5' read P
BX397942.2 Clone CS0DI044YP14 placenta 3' read P
BX397943.2 Clone CS0DI044YP14 placenta 5' read P
BX339100.2 Clone CS0DI067YB18 placenta 3' read
AI873510.1 Clone IMAGE:2362267 mixed 3' read
BX427504.2 Clone CS0DM010YB12 liver 3' read
BX427505.2 Clone CS0DM010YB12 liver 5' read P
AI961196.1 Clone IMAGE:2475586 uncharacterized tissue 3' read P
AI969025.1 Clone IMAGE:2476586 uncharacterized tissue 3' read P
AI970068.1 Clone IMAGE:2477619 prostate 3' read A
AI989488.1 Clone IMAGE:2498213 uncharacterized tissue 3' read
AW004073.1 Clone IMAGE:2478884 uncharacterized tissue 3' read P
AW006703.1 Clone IMAGE:2489000 prostate 3' read P
CD642505.1 Clone IMAGE:30419746 embryonic tissue 5' read P
BX486882.1 Clone DKFZp686O10253 muscle 5' read
BX498247.1 Clone DKFZp779G1838 liver 5' read
BX503006.1 Clone DKFZp779F1871 liver 5' read P
AW073484.1 Clone IMAGE:2568892 connective tissue 3' read
AJ572311.1 Clone HSPD44862 muscle A
AW152295.1 Clone IMAGE:2630404 uterus 3' read
AW193706.1 Clone IMAGE:2685627 uncharacterized tissue 3' read P
BX643838.1 Clone DKFZp781N0729 uncharacterized tissue 5' read P
CF528563.1 Clone UI-1-BC1-aja-c-11-0-UI placenta 3' read A
CF529434.1 Clone UI-1-BC1p-asd-d-06-0-UI placenta 3' read A
AW207383.1 Clone IMAGE:2721698 mixed 3' read PA
AW207405.1 Clone IMAGE:2721794 mixed 3' read PA
CF596862.1 Clone IMAGE:30704978 ovary 5' read P
AW374294.1 intestine P
CK000548.1 Clone IMAGE:30708567 mixed 5' read P
CK000711.1 Clone IMAGE:30708273 mixed 5' read P
AW513807.1 Clone IMAGE:2707300 uterus 3' read P
AW579419.1 kidney
AW594336.1 Clone IMAGE:2949958 uncharacterized tissue 3' read P
AW779503.1 Clone IMAGE:3035589 intestine 3' read P
R76295.1 Clone IMAGE:159066 mammary gland 5' read
R76563.1 Clone IMAGE:144819 placenta 3' read A
AW805826.1 uterus
AW818996.1 stomach
AW887724.1 ovary P
CN478913.1 Clone UI-CF-FN0-afu-n-13-0-UI lung 3' read PA
CN272307.1 embryonic tissue 5' read
CN278769.1 embryonic tissue 5' read
CN278770.1 embryonic tissue 5' read
CN358850.1 embryonic tissue 5' read P
CN358851.1 embryonic tissue 5' read PA
CN358852.1 embryonic tissue 5' read P
CN358853.1 embryonic tissue 5' read P
CN358854.1 embryonic tissue 5' read P
CN358855.1 embryonic tissue 5' read P
CN358856.1 embryonic tissue 5' read P
CN358857.1 embryonic tissue 5' read P
AW963661.1 uncharacterized tissue P
AW963824.1 uncharacterized tissue
BE176850.1 thyroid
BE176931.1 thyroid
BE184283.1 pharynx
BE348951.1 Clone IMAGE:3144634 kidney 3' read
BE294161.1 Clone IMAGE:3528436 muscle 5' read P
H27619.1 Clone IMAGE:162721 mammary gland 5' read
AV646912.1 Clone GLCASF05 liver 3' read
AV646938.1 Clone GLCASH07 liver 3' read
AV647288.1 Clone GLCAWG01 liver 3' read
AV647549.1 Clone GLCAZE01 liver 3' read
AV647617.1 Clone GLCBAB09 liver 3' read
AV647715.1 Clone GLCBBC01 liver 3' read
CX870635.1 Clone IMAGE:7475493 embryonic tissue 5' read P
BE740281.1 Clone IMAGE:3949263 ovary 5' read
BE741006.1 Clone IMAGE:3949218 ovary 5' read P
BE745167.1 Clone IMAGE:3834937 ovary 5' read P
BE762801.1 brain
BE783300.1 Clone IMAGE:3873713 eye 5' read
BE787111.1 Clone IMAGE:3879638 lung 5' read P
BE789913.1 Clone IMAGE:3879741 lung 5' read
BE793346.1 Clone IMAGE:3942611 lung 5' read P
BE877254.1 Clone IMAGE:3887565 lung 5' read P
DN996484.1 Clone TC105994 mammary gland 5' read P
DR002201.1 Clone TC106089 brain 5' read P
DR005233.1 Clone TC124844 prostate 5' read P
DR005558.1 Clone TC117742 prostate 5' read P
BE855495.1 Clone IMAGE:3306507 brain 3' read A
BE937578.1 stomach
BF027686.1 Clone IMAGE:3954257 skin 5' read
DR156892.1 Clone IMAGE:7965467 embryonic tissue 5' read P
DR158700.1 Clone IMAGE:7967747 embryonic tissue 5' read P
BF083066.1 intestine P
BF103888.1 Clone IMAGE:3931654 testis 5' read P
CR980351.1 Clone RZPDp9017L2230 uncharacterized tissue 5' read P
BF347641.1 Clone IMAGE:4157575 brain 5' read
BF688690.1 Clone IMAGE:4299753 eye 5' read P
BF688916.1 Clone IMAGE:4299753 eye 3' read P
DA107849.1 Clone BRACE3022751 brain 5' read P
DA569729.1 Clone HEMBA1003381 embryonic tissue 5' read P
BF853130.1 lung
DA392837.1 Clone BRTHA2031057 brain 5' read
BF853548.1 lung
DA355302.1 Clone BRSTN2000140 brain 5' read
DA570463.1 Clone HEMBA1004804 embryonic tissue 5' read
BF056467.1 Clone IMAGE:3443434 uncharacterized tissue 3' read
BF057206.1 Clone IMAGE:3444536 uncharacterized tissue 3' read
BF063248.1 Clone IMAGE:3322923 intestine 3' read
DA571461.1 Clone HEMBA1006645 embryonic tissue 5' read
BF476041.1 Clone IMAGE:3254805 prostate 3' read
BF478256.1 Clone IMAGE:3698864 uncharacterized tissue 3' read
BF507884.1 Clone IMAGE:3085068 uncharacterized tissue 3' read A
DA802887.1 Clone OCBBF3007509 brain 5' read P
H83315.1 Clone IMAGE:249192 skin 5' read
DB203702.1 Clone TRACH2014652 trachea 5' read P
DB356420.1 Clone HEMBA1003381 embryonic tissue 3' read P
DB357230.1 Clone HEMBA1004804 embryonic tissue 3' read A
DW412678.1 liver
DW415201.1 liver P
DW418256.1 liver
DW424172.1 liver
DW430581.1 liver P
DW435966.1 liver P
DW449826.1 liver
DW449869.1 liver
DW452042.1 liver P
DW452224.1 liver P
H55266.1 Clone C22_257 uncharacterized tissue 5' read
BG013321.1 placenta
BF984442.1 Clone IMAGE:4399221 intestine 5' read P
BF987032.1 placenta P
H96826.1 Clone IMAGE:250849 skin 5' read
BF969501.1 Clone IMAGE:4359917 adrenal gland 5' read
BF939062.1 Clone IMAGE:3706946 lung 3' read P
N22475.1 Clone IMAGE:254178 ear 3' read
BG169992.1 Clone IMAGE:4426423 kidney 5' read
N23446.1 Clone IMAGE:250849 skin 3' read
DB445658.1 Clone H013021G01 testis 5' read
BG250084.1 Clone IMAGE:4470571 liver 5' read
BG256666.1 Clone IMAGE:4478964 uncharacterized tissue 5' read P
N27212.1 Clone IMAGE:257538 placenta 3' read
N27215.1 Clone IMAGE:257539 placenta 3' read
N32188.1 Clone IMAGE:272296 skin 3' read
N32190.1 Clone IMAGE:272300 skin 3' read
BG330951.1 Clone IMAGE:4549441 lung 5' read
BG332366.1 Clone IMAGE:4551124 lung 5' read
N39956.1 Clone IMAGE:257538 placenta 5' read
N39959.1 Clone IMAGE:257539 placenta 5' read
BG675880.1 Clone IMAGE:4747374 skin 5' read
BI010762.1 lung P
BG955592.1 intestine P
BG959939.1 intestine
BG717620.1 Clone IMAGE:4830464 testis 5' read
BJ996009.1 Clone hyst-0423 liver 5' read P
BJ996010.1 Clone hyst-0423 liver 3' read A
BJ997154.1 Clone hyst-3026 liver 3' read A
ES313868.1 skin P
AU185401.1 Clone B01919-003 uncharacterized tissue P
BM018123.1 Clone IMAGE:5427434 brain 5' read
BM558189.1 Clone IMAGE:5477967 brain 5' read P
BM560080.1 Clone IMAGE:5476446 skin 5' read A
BM560510.1 Clone IMAGE:5432150 brain 5' read
BM677532.1 Clone UI-E-EO1-aid-d-05-0-UI eye 3' read PA
W42451.1 Clone IMAGE:323074 skin 3' read
W42556.1 Clone IMAGE:323074 skin 5' read
BM787986.1 Clone S10SNU1-22-E11 ascites 5' read
BM911896.1 Clone IMAGE:5471045 skin 5' read
BM979584.1 Clone UI-CF-DU1-adt-g-07-0-UI lung 3' read PA
BQ001268.1 Clone IMAGE:5892415 connective tissue 3' read PA
BQ012217.1 Clone UI-1-BC1p-asm-b-02-0-UI placenta 3' read A
BQ012590.1 Clone UI-1-BC1p-asv-b-04-0-UI placenta 3' read A
BQ013268.1 Clone UI-1-BC1p-ayu-d-08-0-UI placenta 3' read A
BQ027850.1 Clone IMAGE:3106215 uncharacterized tissue 3' read A
BQ028020.1 Clone IMAGE:3106426 uncharacterized tissue 3' read A
BQ068639.1 Clone IMAGE:5802064 brain 5' read P
BQ216350.1 Clone IMAGE:6057218 lung 5' read
BQ435201.1 Clone IMAGE:6176209 uterus 5' read P
AA037092.1 Clone IMAGE:326041 skin 5' read
BQ687053.1 Clone IMAGE:6249054 pancreas 5' read P
T56347.1 Clone IMAGE:73058 spleen 3' read P
T56497.1 Clone IMAGE:73058 spleen 5' read
BG122503.1 Clone IMAGE:4451211 liver 5' read P
AA053680.1 Clone IMAGE:510393 intestine 3' read P
AA053700.1 Clone IMAGE:510393 intestine 5' read
BQ900368.1 Clone IMAGE:6381171 prostate 5' read P
BQ917309.1 Clone IMAGE:6202719 nerve 5' read P
BU507186.1 Clone IMAGE:6501093 uterus 5' read
BU542306.1 Clone IMAGE:6574134 prostate 5' read P
FN122803.1 Clone 178159_0772_3694
FN106364.1 Clone 135357_3582_0521
AA134281.1 Clone IMAGE:587729 intestine 5' read
AA134282.1 Clone IMAGE:587729 intestine 3' read P
FN110968.1 Clone 147702_1982_2537
FN123341.1 Clone 179419_1879_2864
FN053144.1 Clone 010354_2147_1735
FN146808.1 Clone 235610_1580_3587
FN116160.1 Clone 161400_1315_3220
FN081526.1 Clone 067211_0898_3596
FN052295.1 Clone 009340_3648_2563
BY997076.1 Clone MCT1432 5' read
BU625129.1 Clone UI-H-FG1-bgm-a-05-0-UI bone 3' read PA
BU621980.1 Clone UI-H-FH1-bft-o-05-0-UI bone 3' read PA
AA192754.1 Clone IMAGE:629472 muscle 3' read P
AA192830.1 Clone IMAGE:629472 muscle 5' read P
AA194130.1 Clone IMAGE:665597 mixed 5' read
AA223263.1 Clone IMAGE:650875 testis 3' read A
AA223380.1 Clone IMAGE:650875 testis 5' read P
AA223571.1 Clone IMAGE:650803 testis 3' read A
AA223568.1 Clone IMAGE:650803 testis 5' read P
BU664724.1 Clone cl121e12 blood 5' read P
BU963736.1 Clone IMAGE:6745070 mixed 5' read P
AA247285.1 heart 5' read
HY005335.1 Clone H04D018P13 testis
HY013057.1 Clone H04D045G13 testis P
HY020105.1 Clone H04D068B22 testis P
HY041037.1 Clone H04D144D07 testis P
HY041476.1 Clone H04D146B01 testis
HY189154.1 Clone H04D018P13 testis
HY197265.1 Clone H04D045G13 testis
HY212847.1 Clone H04D098G08 testis
CA336281.1 Clone IMAGE:5607514 embryonic tissue 5' read
CA310885.1 Clone UI-CF-FN0-afb-b-06-0-UI lung 3' read PA
CA314316.1 Clone UI-CF-FN0-aez-f-20-0-UI lung 3' read PA
CA417107.1 Clone UI-H-FE0-bbp-h-14-0-UI bone 3' read A
CA427393.1 Clone UI-H-FH1-bfi-i-10-0-UI bone 3' read PA
CA430563.1 Clone UI-H-FH1-bft-b-20-0-UI bone 3' read PA
CA432592.1 Clone UI-H-FL1-bgs-d-17-0-UI bone 3' read A
CA447849.1 Clone UI-H-EI0-ayf-j-15-0-UI connective tissue 3' read A
AA300837.1 testis 5' read
T80557.1 Clone IMAGE:24834 brain 5' read
AA373368.1 lung 5' read
AA373511.1 lung 5' read P
AA375743.1 lung 5' read
AA595227.1 Clone IMAGE:1057383 mammary gland 3' read P
AA595272.1 Clone IMAGE:1102485 prostate 3' read P
AA614837.1 Clone IMAGE:1098454 mammary gland 3' read
AA743543.1 Clone IMAGE:1272674 lymph node 3' read P
AA857342.1 Clone IMAGE:1474951 pharynx 3' read P
AA878981.1 Clone IMAGE:1493320 kidney 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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