> Apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 (APOBEC1)
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UGID:130785     UniGene Hs.560     Homo sapiens (human)   APOBEC1 Links
Apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 (APOBEC1)

Human protein-coding gene APOBEC1. Represented by 59 ESTs from 4 cDNA libraries. EST representation biased toward intestine; colorectal tumor; adult. Corresponds to reference sequence NM_001644.3. [UniGene 130785 - Hs.560]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001635.2 APOBEC1 gene product H. sapiens 100.0 235
NP_112436.1 Apobec1 gene product M. musculus 71.9 228
Other hits (2 of 11) [Show all]SpeciesId(%)Len(aa)
XP_001164661.1 PREDICTED: c->U-editing enzyme APOBEC-1 isoform 1 P. troglodytes 98.7 235
XP_001112583.1 PREDICTED: c->U-editing enzyme APOBEC-1 isoform 2 M. mulatta 94.9 235

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: intestine [show more like this]
colorectal tumor [show more like this]
adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: intestine; uncharacterized tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12p13.1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (15)

U72891.1 Human apolipoprotein B mRNA editing enzyme complex-1 (apobec-1) mRNA, complete cds P
U72890.1 Human apolipoprotein B mRNA editing enzyme complex-1 (apobec-1) mRNA, partial cds
NM_001644.3 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 (APOBEC1), mRNA PA
BC096159.1 Homo sapiens cDNA clone IMAGE:40003121, containing frame-shift errors P
BC096161.1 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1, mRNA (cDNA clone IMAGE:40003123) P
BC096160.1 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1, mRNA (cDNA clone IMAGE:40003122) P
BC096158.1 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1, mRNA (cDNA clone IMAGE:40003120), partial cds P
BC101405.1 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1, mRNA (cDNA clone IMAGE:40003124) P
BC101404.1 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1, mRNA (cDNA clone IMAGE:40003127) P
BC101973.1 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1, mRNA (cDNA clone IMAGE:40003125), partial cds P
BC101972.1 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1, mRNA (cDNA clone IMAGE:40003128), partial cds P
L26234.1 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1 (APOBEC1) mRNA, complete cds P
U78720.1 Human apolipoprotein B mRNA editing protein mRNA, exon 3, partial cds P
BC144708.1 Homo sapiens cDNA clone IMAGE:9053245 P
L25877.1 Homo sapiens apolipoprotein B mRNA editing protein mRNA, complete cds P

EST sequences (59)

AI380263.1 Clone IMAGE:2107422 uncharacterized tissue 3' read PA
AI732653.1 Clone IMAGE:1075334 intestine 3' read PA
BX281469.1 Clone IMAGp998G075197_;_IMAGE:2107422 uncharacterized tissue P
AI862416.1 Clone IMAGE:2075805 intestine 3' read PA
AW376530.1 intestine
AW376531.1 intestine
AW376538.1 intestine
AW376539.1 intestine
AW376540.1 intestine P
AW376541.1 intestine
AW376542.1 intestine
AW376557.1 intestine P
AW376558.1 intestine P
AW376559.1 intestine P
AW376567.1 intestine P
AW376568.1 intestine P
AW376606.1 intestine
AW376837.1 intestine
AW376838.1 intestine P
AW376843.1 intestine
AW376844.1 intestine
AW578369.1 intestine P
AW752642.1 intestine
AW848225.1 intestine P
AW848245.1 intestine P
AW848247.1 intestine P
AW848248.1 intestine
AW848259.1 intestine P
AW848260.1 intestine
AW848310.1 intestine P
AW848325.1 intestine
AW848326.1 intestine
AW848397.1 intestine P
AW848452.1 intestine P
AW848537.1 intestine
AW848538.1 intestine
AW848603.1 intestine
AW848604.1 intestine P
AW848741.1 intestine P
AW848743.1 intestine
AW848744.1 intestine P
AW848758.1 intestine P
AW849010.1 intestine
AW849011.1 intestine
AW849014.1 intestine P
AW849015.1 intestine
AW849026.1 intestine P
AW849027.1 intestine
AW849028.1 intestine P
AW849082.1 intestine
AW849083.1 intestine
AW849089.1 intestine
AW849090.1 intestine
AW849098.1 intestine
AW849099.1 intestine
BF334027.1 intestine
BF334033.1 intestine P
BQ317071.1 intestine
AA587939.1 Clone IMAGE:1075334 intestine 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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