C-type lectin domain family 10, member A (CLEC10A)

Restricted Expression:

adult [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

mixed; prostate; intestine; cervix; testis; thymus; placenta; blood; lung; uncharacterized tissue; uterus; eye; ovary; connective tissue; bone; pancreas; brain; spleen; adipose tissue; mammary gland

Human protein-coding gene CLEC10A. Represented by 63 ESTs from 37 cDNA libraries. EST representation biased toward adult. Corresponds to 2 reference sequences (different isoforms). [UniGene 138098 - Hs.54403]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_878910.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	CLEC10A gene product	H. sapiens	100.0	315
NP_033844.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Asgr1 gene product	M. musculus	62.7	283
Other hits (2 of 12) [Show all]		Species	Id(%)	Len(aa)
XP_001168677.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: C-type lectin domain family 10 member A	P. troglodytes	99.0	291
XP_001105418.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: c-type lectin domain family 10 member A-like isoform 2	M. mulatta	90.0	288

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	17
	Map position:	17p13.1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

NM_182906.2	Homo sapiens C-type lectin domain family 10, member A (CLEC10A), transcript variant 1, mRNA	PA
NM_006344.2	Homo sapiens C-type lectin domain family 10, member A (CLEC10A), transcript variant 2, mRNA	PA
BC027858.1	Homo sapiens C-type lectin domain family 10, member A, mRNA (cDNA clone MGC:34439 IMAGE:5225381), complete cds	PA
D50532.1	Homo sapiens mRNA for macrophage lectin 2, complete cds	P
AK292363.1	Homo sapiens cDNA FLJ75226 complete cds, highly similar to Homo sapiens C-type lectin domain family 10, member A, mRNA	P
AK291975.1	Homo sapiens cDNA FLJ78539 complete cds, highly similar to Homo sapiens C-type lectin domain family 10, member A, mRNA	P
BC039011.1	Homo sapiens C-type lectin domain family 10, member A, mRNA (cDNA clone MGC:47699 IMAGE:5751735), complete cds	PA

EST sequences (63)

AI078064.1	Clone IMAGE:1675181	mixed	3' read
AI159890.1	Clone IMAGE:1704062	brain	3' read	PA
AI207066.1	Clone IMAGE:1756360	lung	3' read	A
AI357378.1	Clone IMAGE:2011862	brain	3' read	A
AI436260.1	Clone IMAGE:2124537	mixed	3' read	P
BX282000.1	Clone IMAGp998L2411439_;_IMAGE:5176487	mixed		P
AW173547.1	Clone IMAGE:2656633	uterus	3' read	PA
CR746823.1	Clone IMAGp998F0611440_;_IMAGE:5176709	mixed	5' read	P
BP228397.1	Clone DMC09275	uncharacterized tissue	5' read	P
BP338480.1	Clone SPL02193	spleen	5' read	P
BP377240.1	Clone WMC06874	uterus	5' read	P
BP391821.1	Clone h-t-256-39	pancreas	3' read	PA
DR005214.1	Clone TC116133	prostate	5' read	P
BP417710.1	Clone HIE00757r	intestine	3' read	P
DA541269.1	Clone FELNG2001314	lung	5' read
DA620172.1	Clone JCMLC2001520	uncharacterized tissue	5' read	P
DA620268.1	Clone JCMLC2001689	uncharacterized tissue	5' read	P
DA917764.1	Clone SMINT2002514	intestine	5' read	P
DB007912.1	Clone TCERX2001545	cervix	5' read	P
DB049888.1	Clone TESTI2039303	testis	5' read
DB271363.1	Clone UTERU2033168	uterus	5' read	P
DB116188.1	Clone THYMU2022304	thymus	5' read	P
AL546075.3	Clone CS0DI024YN10	placenta	5' read	P
AL571567.3	Clone CS0DI024YN10	placenta	3' read
EL733763.1		mixed	5' read	P
EL736415.1		mixed	5' read	P
BI518752.1	Clone IMAGE:5211200	blood	5' read	P
BI767532.1	Clone IMAGE:5210406	mixed	5' read	P
BI767957.1	Clone IMAGE:5210407	mixed	5' read
BI770687.1	Clone IMAGE:5210382	mixed	5' read	P
BI770754.1	Clone IMAGE:5210429	mixed	5' read	P
BI820020.1	Clone IMAGE:5176487	mixed	5' read	P
BI820664.1	Clone IMAGE:5175683	mixed	5' read	P
BI821633.1	Clone IMAGE:5177584	mixed	5' read	P
BI838052.1	Clone IMAGE:5225380	mixed	5' read	P
BI838214.1	Clone IMAGE:5222622	mixed	5' read	P
BI838888.1	Clone IMAGE:5226471	mixed	5' read	P
BI838993.1	Clone IMAGE:5226398	mixed	5' read
BI839107.1	Clone IMAGE:5228075	mixed	5' read
BI839159.1	Clone IMAGE:5225381	mixed	5' read
BI905917.1	Clone IMAGE:5212290	blood	5' read	P
BI910082.1	Clone IMAGE:5217052	blood	5' read	P
BI910159.1	Clone IMAGE:5218638	blood	5' read
BI910338.1	Clone IMAGE:5217550	blood	5' read	P
BI912266.1	Clone IMAGE:5216641	blood	5' read
BI912448.1	Clone IMAGE:5220344	blood	5' read	P
BM675204.1	Clone UI-E-EJ0-ahr-k-04-0-UI	eye	3' read	PA
BM714409.1	Clone UI-E-EJ0-ahr-k-04-0-UI	eye	5' read	P
BM903641.1	Clone IMAGE:5722054	ovary	5' read
BM974488.1	Clone UI-CF-EC1-aca-p-15-0-UI	lung	3' read	PA
BM988225.1	Clone IMAGE:5861981	uncharacterized tissue	3' read	PA
BQ018186.1	Clone IMAGE:5890661	connective tissue	3' read	PA
BQ067335.1	Clone IMAGE:5751735	mixed	5' read	P
FN105088.1	Clone 132055_1627_1454
BU616457.1	Clone UI-H-DF0-bey-b-13-0-UI	bone	3' read	PA
BU621880.1	Clone UI-H-DF0-bev-j-20-0-UI	bone	3' read	PA
BU687211.1	Clone UI-CF-EC1-adv-g-09-0-UI	lung	3' read	PA
CA407906.1		adipose tissue	5' read	P
CA412958.1	Clone UI-H-EZ0-bao-b-08-0-UI	bone	3' read	PA
CA418829.1	Clone UI-H-EZ1-bbg-m-10-0-UI	bone	3' read	PA
CA442104.1	Clone UI-H-DI0-avm-m-05-0-UI	lung	3' read	PA
AA526908.1	Clone IMAGE:967550	mammary gland	3' read	A
AA935941.1	Clone IMAGE:1556888	lung	3' read	A