> Coiled-coil domain containing 84 (CCDC84)
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UGID:1370927     UniGene Hs.534613     Homo sapiens (human)   CCDC84 Order cDNA clone, Links
Coiled-coil domain containing 84 (CCDC84)

Human protein-coding gene CCDC84. Represented by 155 ESTs from 102 cDNA libraries. Corresponds to reference sequence NM_198489.1. [UniGene 1370927 - Hs.534613]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001163712.1 PREDICTED: coiled-coil domain-containing protein 84 P. troglodytes 100.0 331
NP_940891.1 CCDC84 gene product H. sapiens 100.0 331
NP_958760.2 coiled-coil domain-containing protein 84 M. musculus 90.1 331
NP_001086475.1 ribosomal protein S25 X. laevis 83.2 124
NP_957109.1 rps25 gene product D. rerio 78.2 123
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_003910851.1 PREDICTED: coiled-coil domain-containing protein 84 P. anubis 99.1 330
XP_001095812.1 PREDICTED: coiled-coil domain-containing protein 84-like M. mulatta 98.5 202

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; mixed; brain; uncharacterized tissue; uterus; eye; placenta; intestine; liver; kidney; embryonic tissue; prostate; amniotic fluid; blood; bone marrow; bladder; skin; connective tissue; mammary gland; pancreas; stomach; thyroid; muscle; bone; testis; vascular; adrenal gland; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q23.3
UniSTS entry: Chr 11 RH102156
UniSTS entry: Chr 11 RH104249
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AB094093.1 Homo sapiens DLNB14 mRNA, complete cds P
NM_198489.1 Homo sapiens coiled-coil domain containing 84 (CCDC84), mRNA P
BC126471.1 Homo sapiens coiled-coil domain containing 84, mRNA (cDNA clone MGC:161749 IMAGE:8992187), complete cds P
BC126469.1 Homo sapiens coiled-coil domain containing 84, mRNA (cDNA clone MGC:161747 IMAGE:8992185), complete cds P
BC144210.1 Homo sapiens cDNA clone IMAGE:9052730 P
BC144209.1 Homo sapiens cDNA clone IMAGE:9052729 P
BC144208.1 Homo sapiens cDNA clone IMAGE:9052728 P

EST sequences (155)

AA906049.1 Clone IMAGE:1505582 mixed 3' read A
AA862842.1 Clone IMAGE:1469774 uncharacterized tissue 3' read A
CB067381.1 Clone IMAGE: pancreas 3' read
CB067679.1 Clone IMAGE: pancreas 5' read P
CB160667.1 Clone L18POOL1n1-22-D10 liver 5' read
AI270685.1 Clone IMAGE:1979372 stomach 3' read PA
AI279625.1 Clone IMAGE:1882433 lung 3' read P
AI282884.1 Clone IMAGE:1962277 intestine 3' read A
CB216913.1 Clone IMAGE:5938555 uterus 5' read
AI476751.1 Clone IMAGE:2157467 mixed 3' read A
AI559322.1 Clone IMAGE:2211589 uterus 3' read A
AI678463.1 Clone IMAGE:2257581 stomach 3' read A
AI696295.1 Clone IMAGE:2262381 uterus 3' read A
AI697110.1 Clone IMAGE:2208824 uterus 3' read PA
AI698074.1 Clone IMAGE:2341676 lung 3' read P
CB241703.1 Clone UI-CF-FN0-afz-j-13-0-UI lung 3' read A
AI803894.1 Clone IMAGE:2189342 stomach 3' read A
BX281470.1 Clone IMAGp998C1112009_;_IMAGE:5395906 mammary gland P
CB321979.1 Clone UI-CF-FN0-aen-a-02-0-UI lung 3' read PA
AI830046.1 Clone IMAGE:2407039 lung 3' read PA
AI859177.1 Clone IMAGE:2429908 brain 3' read A
AI887619.1 Clone IMAGE:2436073 uterus 3' read
CB989556.1 Clone IMAGE:30341151 placenta 5' read P
CB996802.1 Clone IMAGE:30336285 placenta 5' read P
CB963473.1 Clone IMAGE:30318387 vascular 5' read P
BX331725.2 Clone CS0DC001YG20 uncharacterized tissue 3' read P
CD171823.1 Clone IMAGE:30379064 testis 5' read
CD245279.1 Clone IMAGE:30376720 brain 5' read
AW014772.1 Clone IMAGE:2709296 uncharacterized tissue 3' read PA
AW205594.1 Clone IMAGE:2722521 mixed 3' read PA
AW243066.1 Clone IMAGE:2695069 kidney 3' read P
AW471042.1 Clone IMAGE:2870533 lung 3' read P
AW474498.1 Clone IMAGE:2777603 uterus 3' read
AW474545.1 Clone IMAGE:2777699 uterus 3' read P
CK431242.1 Clone oj59g02 eye 5' read
AW801582.1 uterus
AW836779.1 uncharacterized tissue
CK902936.1 Clone IMAGE: pancreas 3' read P
AW855254.1 intestine
AW864203.1 stomach
CN291332.1 embryonic tissue 5' read P
CN294923.1 embryonic tissue 5' read P
AW957079.1 uncharacterized tissue P
BE070355.1 mammary gland P
BE139471.1 Clone IMAGE:2760484 uterus 3' read A
BE222549.1 Clone IMAGE:3180922 lung 3' read P
BE222878.1 Clone IMAGE:3173919 brain 3' read PA
CV372233.1 intestine
BE467966.1 Clone IMAGE:3213928 lung 3' read P
BE504243.1 Clone IMAGE:3180380 lung 3' read P
CX163154.1 Clone IMAGE:30928087 embryonic tissue 5' read P
BE644916.1 Clone IMAGE:3286974 mixed 3' read
BE669606.1 Clone IMAGE:3282589 lung 3' read P
BE671099.1 Clone IMAGE:3285485 lung 3' read
CX759681.1 Clone IMAGE:7769797 embryonic tissue 3' read P
BE780521.1 Clone IMAGE:3872017 eye 5' read
BE796421.1 Clone IMAGE:3945950 lung 5' read P
BE772952.1 prostate
BE839469.1 prostate
DR002864.1 Clone TC105449 brain 5' read
AV757705.1 Clone BMFBHF10 bone marrow 5' read
DR760563.1 Clone IMAGE:7970147 embryonic tissue 5' read
BF109076.1 Clone IMAGE:3524656 mixed 3' read
BY798108.2 Clone HE3167.seq eye 5' read P
H54279.1 Clone IMAGE:203321 mixed 3' read
H54358.1 Clone IMAGE:203321 mixed 5' read
BF446390.1 Clone IMAGE:3648128 prostate 3' read PA
BF447893.1 Clone IMAGE:3706189 lung 3' read P
H62426.1 Clone IMAGE:211476 mixed 5' read
H62449.1 Clone IMAGE:211523 mixed 5' read
AA770029.1 Clone IMAGE:431168 mixed 3' read
DA321354.1 Clone BRHIP3014517 brain 5' read
BF851927.1 lung
BF853446.1 lung
DR979362.1 Clone ID_14210 placenta 3' read A
DB381074.1 Clone PLACE2000428 placenta 3' read PA
BF733257.1 amniotic fluid
DB320666.1 Clone KIDNE2006882 kidney 3' read P
BF765467.1 intestine
BF766228.1 intestine
BF816869.1 intestine
BG011780.1 placenta
BF988838.1 placenta
BF934358.1 brain
BF915543.1 uterus
BF879855.1 lung
BG149341.1 Clone IMAGE:3366740 lung 3' read P
BG149789.1 Clone IMAGE:3406926 lung 3' read P
DB570357.2 Clone H033072J18 brain 3' read PA
DB565963.1 Clone H033056J08 brain 3' read PA
BG231618.1 Clone IMAGE:4143220 blood 3' read PA
BG403663.1 Clone IMAGE:4526324 bladder 5' read P
BG483911.1 Clone IMAGE:4617886 lung 5' read
BG674817.1 Clone IMAGE:4746300 skin 5' read
BG679894.1 Clone IMAGE:4751496 skin 5' read
BG928356.1 connective tissue
BI089662.1 Clone IMAGE:4996068 placenta 5' read A
BI046058.1 prostate P
BI046266.1 prostate P
BI046678.1 prostate
BI000398.1 thyroid
BI003850.1 thyroid
BI015596.1 lung
BG957414.1 intestine
BG701634.1 Clone IMAGE:4815220 brain 5' read P
BI602213.1 Clone IMAGE:5286515 brain 5' read
EL950243.1 eye 5' read
BI552725.1 Clone IMAGE:5265187 brain 5' read P
BI769735.1 Clone IMAGE:5204408 mixed 5' read P
BI859740.1 Clone IMAGE:5395906 mammary gland 5' read P
BM682005.1 Clone UI-E-EO1-aiw-c-24-0-UI eye 3' read PA
BM683938.1 Clone UI-E-EJ1-ajk-d-09-0-UI eye 3' read A
BM684305.1 Clone UI-E-EJ1-aji-l-23-0-UI eye 3' read PA
BM709425.1 Clone UI-E-CQ1-afy-g-23-0-UI brain 5' read
BM729072.1 Clone UI-E-EO1-aiw-c-24-0-UI eye 5' read
BM972124.1 Clone UI-CF-EC1-abp-m-17-0-UI lung 3' read PA
BM975657.1 Clone UI-CF-EN1-acx-b-09-0-UI lung 3' read PA
BM976229.1 Clone UI-CF-EN1-acy-b-11-0-UI lung 3' read PA
BQ006160.1 Clone IMAGE:5845365 connective tissue 3' read PA
BQ006283.1 Clone IMAGE:5845575 connective tissue 3' read PA
BQ007036.1 Clone IMAGE:5846663 connective tissue 3' read PA
BM929870.1 Clone UI-E-EJ1-aji-l-23-0-UI eye 5' read P
BM931800.1 Clone UI-E-EJ1-ajk-d-09-0-UI eye 5' read A
W26193.1 eye
BU608895.1 Clone UI-CF-FN0-aeq-l-18-0-UI lung 3' read PA
BU608980.1 Clone UI-CF-FN0-aer-m-01-0-UI lung 3' read PA
AA192605.1 Clone IMAGE:628470 muscle 5' read
AA192606.1 Clone IMAGE:628470 muscle 3' read PA
BU664600.1 Clone cl119f01 blood 5' read
BU733365.1 Clone UI-E-CQ1-afy-g-23-0-UI brain 3' read PA
BU733404.1 Clone UI-E-CQ1-afy-o-23-0-UI brain 3' read PA
CA313047.1 Clone UI-CF-FN0-aex-i-18-0-UI lung 3' read A
CA424880.1 Clone UI-H-FE1-bee-a-19-0-UI bone 3' read PA
CA428939.1 Clone UI-H-FH1-bfg-i-14-0-UI bone 3' read A
CA438335.1 Clone UI-H-DT1-avw-i-06-0-UI connective tissue 3' read PA
CA438500.1 Clone UI-H-DT1-avx-m-17-0-UI connective tissue 3' read PA
AA337107.1 uterus 5' read
CA748930.1 Clone UI-H-FE1-bee-a-19-0-UI bone 3' read PA
AA369307.1 placenta 3' read
AA369308.1 placenta 5' read
T84753.1 Clone IMAGE:112051 mixed 5' read
T89738.1 Clone IMAGE:117466 lung 3' read
T91778.1 Clone IMAGE:111858 mixed 3' read
AA548631.1 Clone IMAGE:994764 adrenal gland 3' read A
AA588738.1 Clone IMAGE:1084221 intestine 3' read PA
AA614646.1 Clone IMAGE:1130125 mammary gland 3' read PA
AA622890.1 Clone IMAGE:1130502 mammary gland 3' read A
T98662.1 Clone IMAGE:122239 mixed 3' read A
T98718.1 Clone IMAGE:122239 mixed 5' read
C75563.1 Clone hbc7873 pancreas
C75627.1 Clone hbc7978 pancreas
AA677245.1 Clone IMAGE:454336 mixed 3' read PA
AA677412.1 Clone IMAGE:454905 mixed 3' read
AA708891.1 Clone IMAGE:384590 pineal gland 3' read A
AA779404.1 Clone IMAGE:896930 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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