NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
Finding cDNAs

UGID:1370782     UniGene Hs.534468     Homo sapiens (human)   APOM
Apolipoprotein M (APOM)

Human protein-coding gene APOM. Represented by 148 ESTs from 50 cDNA libraries. EST representation biased toward fetus. Corresponds to 3 reference sequences (different isoforms). [UniGene 1370782 - Hs.534468]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_061974.2 APOM gene product H. sapiens 100.0 187
NP_061286.1 apolipoprotein M precursor M. musculus 85.2 189
Other hits (2 of 13) [Show all]SpeciesId(%)Len(aa)
XP_518354.2 PREDICTED: apolipoprotein M isoform 3 P. troglodytes 99.5 187
XP_003897413.1 PREDICTED: apolipoprotein M isoform 1 P. anubis 98.4 187

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: fetus [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: liver; mixed; uncharacterized tissue; testis; brain; lung; embryonic tissue; kidney; uterus; blood; tonsil; heart; eye; parathyroid; prostate; spleen; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p21.33
UniSTS entry: Chr 6 A007I39 [Map Viewer]
UniSTS entry: SHGC-33421
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AF118393.3 Homo sapiens apolipoprotein M mRNA, complete cds PA
AJ245434.1 Homo sapiens mRNA for G3a protein (G3a gene, located in the class III region of the major histocompatibility complex) P
NM_019101.2 Homo sapiens apolipoprotein M (APOM), transcript variant 1, mRNA PA
BC020683.1 Homo sapiens apolipoprotein M, mRNA (cDNA clone MGC:22400 IMAGE:4733993), complete cds PA
AF161454.1 Homo sapiens HSPC336 mRNA, partial cds PA
NM_001256169.1 Homo sapiens apolipoprotein M (APOM), transcript variant 2, mRNA PA
NR_045828.1 Homo sapiens apolipoprotein M (APOM), transcript variant 3, non-coding RNA PA

EST sequences (148)

AA866141.1 Clone IMAGE:1469344 uncharacterized tissue 3' read PA
AA975560.1 Clone IMAGE:1555459 kidney 3' read
AI001769.1 Clone IMAGE:1619370 testis 3' read A
AI040695.1 Clone IMAGE:1656675 mixed 3' read
AI139900.1 Clone IMAGE:1737883 testis 3' read PA
CB048786.1 Clone IMAGE:3271145 prostate 5' read A
CB054016.1 Clone IMAGE:3291450 brain 5' read P
CB054015.1 Clone IMAGE:3291450 brain 3' read PA
BX100487.1 Clone IMAGp998O1178_;_IMAGE:67042 mixed P
BX105475.1 Clone IMAGp998N195728_;_IMAGE:2311506 uncharacterized tissue A
AI167840.1 Clone IMAGE:1682646 parathyroid 3' read A
AI262868.1 Clone IMAGE:1868233 kidney 3' read A
AI241094.1 Clone IMAGE:1868067 kidney 3' read PA
AI245278.1 Clone IMAGE:1870275 kidney 3' read A
AI290633.1 Clone IMAGE:1880475 mixed 3' read PA
AI338068.1 Clone IMAGE:1950469 lung 3' read PA
AI338747.1 Clone IMAGE:1951667 lung 3' read PA
AI338771.1 Clone IMAGE:1951691 lung 3' read PA
AI825658.1 Clone IMAGE:2311506 uncharacterized tissue 3' read
AI858956.1 Clone IMAGE:2429797 brain 3' read PA
AI937498.1 Clone IMAGE:2467846 brain 3' read PA
AI207404.1 liver P
AW440573.1 Clone IMAGE:2779225 uterus 3' read A
CD629688.1 uncharacterized tissue
CD629689.1 uncharacterized tissue
BX956704.1 Clone DKFZp781M1585 uncharacterized tissue 5' read P
CN282262.1 embryonic tissue 5' read
AW958744.1 uncharacterized tissue P
CN428415.1 embryonic tissue 5' read P
CN428416.1 embryonic tissue 5' read PA
AV646060.1 Clone GLCAJA08 liver 3' read P
AV646113.1 Clone GLCAJF01 liver 3' read P
AV646167.1 Clone GLCAKB08 liver 3' read P
AV646373.1 Clone GLCAMF10 liver 3' read P
AV651609.1 Clone GLCCRF03 liver 3' read P
AV651957.1 Clone GLCCVC10 liver 3' read P
AV651963.1 Clone GLCCVD04 liver 3' read P
AV651991.1 Clone GLCCVF08 liver 3' read P
AV652114.1 Clone GLCCXA01 liver 3' read P
AV652145.1 Clone GLCCXC09 liver 3' read PA
AV652705.1 Clone GLCDDB12 liver 3' read P
AV655684.2 Clone GLCEJD07 liver 3' read P
AV660114.1 Clone GLCGEB12 liver 3' read P
AV660137.1 Clone GLCGED11 liver 3' read P
AV660296.1 Clone GLCGGB05 liver 3' read P
BE780617.1 Clone IMAGE:3871956 eye 5' read
H47973.1 Clone IMAGE:193240 mixed 5' read P
H47974.1 Clone IMAGE:193240 mixed 3' read A
R87191.1 Clone IMAGE:197633 mixed 5' read P
R87192.1 Clone IMAGE:197633 mixed 3' read A
R88914.1 Clone IMAGE:195396 mixed 5' read P
R89592.1 Clone IMAGE:195396 mixed 3' read A
R89848.1 Clone IMAGE:194721 mixed 3' read
R89887.1 Clone IMAGE:194721 mixed 5' read P
AV681809.1 Clone GKBAAH05 liver 5' read P
AV682741.2 Clone GKBAHH08 liver 5' read P
AV685542.1 Clone GKCEZD02 liver 5' read P
AV689015.1 Clone GKCEWD05 liver 5' read P
AV689409.2 Clone GKCCMC06 liver 5' read P
AV690525.1 Clone GKCDJF10 liver 5' read P
AV691366.1 Clone GKCDZD05 liver 5' read P
AV691683.1 Clone GKCCME07 liver 5' read P
AV694543.1 Clone GKCANH11 liver 5' read P
AV695439.1 Clone GKCAOE01 liver 5' read P
AV695920.1 Clone GKCDWE03 liver 5' read P
AV696741.1 Clone GKCFCE04 liver 5' read P
AV697198.1 Clone GKCDEB04 liver 5' read P
AV698463.2 Clone GKCGBA02 liver 5' read P
AV698523.1 Clone GKCGDH06 liver 5' read
AV700215.1 Clone GKBAKE03 liver 3' read PA
AV741123.1 Clone CBNAWD07 blood 5' read A
AV743046.1 Clone CBUADG10 blood 5' read
H51778.1 Clone IMAGE:194206 mixed 5' read P
BF344944.1 Clone IMAGE:4150047 brain 5' read
H57511.1 Clone IMAGE:205103 mixed 5' read
H58322.1 Clone IMAGE:206304 mixed 5' read
H58527.1 Clone IMAGE:206230 mixed 5' read
H59576.1 Clone IMAGE:206732 mixed 5' read P
H59577.1 Clone IMAGE:206732 mixed 3' read
H69658.1 Clone IMAGE:212724 mixed 3' read A
H70071.1 Clone IMAGE:212724 mixed 5' read P
H73534.1 Clone IMAGE:229456 mixed 5' read P
H73535.1 Clone IMAGE:229456 mixed 3' read A
H73788.1 Clone IMAGE:229480 mixed 5' read P
H73789.1 Clone IMAGE:229480 mixed 3' read A
BF439707.1 Clone IMAGE:3405639 brain 3' read PA
H79203.1 Clone IMAGE:229303 mixed 5' read P
DW427179.1 liver
DW432072.1 liver
H91674.1 Clone IMAGE:241706 mixed 3' read
H91770.1 Clone IMAGE:241706 mixed 5' read P
DB520931.1 Clone H013069I19 testis 3' read PA
DB455505.1 Clone H013069I19 testis 5' read P
BG427659.1 Clone IMAGE:4613691 kidney 5' read
DT219000.1 brain
BG562947.1 Clone IMAGE:4709209 liver 5' read P
BG564719.1 Clone IMAGE:4724001 liver 5' read P
BG566971.1 Clone IMAGE:4723484 liver 5' read P
BG567484.1 Clone IMAGE:4715068 liver 5' read P
BG567934.1 Clone IMAGE:4715753 liver 5' read P
BG567948.1 Clone IMAGE:4715423 liver 5' read P
BG617500.1 Clone IMAGE:4733993 liver 5' read P
BG754707.1 Clone IMAGE:4854449 tonsil 5' read P
N74679.1 Clone IMAGE:298702 lung 3' read A
N77319.1 Clone IMAGE:245530 mixed 5' read
EL735629.1 mixed 5' read P
BI252374.1 Clone IMAGE:5087186 liver 5' read P
BI252827.1 Clone IMAGE:5087186 liver 3' read P
N92819.1 Clone IMAGE:308641 lung 3' read A
BI757556.1 Clone IMAGE:5199915 brain 5' read P
BI763633.1 Clone IMAGE:5189930 mixed 5' read P
BI832363.1 Clone IMAGE:5165043 brain 5' read P
BI833437.1 Clone IMAGE:5226959 mixed 5' read
W05041.1 Clone IMAGE:298702 lung 5' read P
W20377.1 Clone IMAGE:327523 heart 3' read A
W24683.1 Clone IMAGE:308281 lung 5' read
W24998.1 Clone IMAGE:308641 lung 5' read P
W35152.1 Clone IMAGE:327523 heart 5' read P
T51332.1 Clone IMAGE:71701 spleen 5' read
BQ335424.1 blood
AA047660.1 Clone IMAGE:376876 heart 3' read A
AA047646.1 Clone IMAGE:376876 heart 5' read
BU533675.1 Clone IMAGE:6560175 mixed 5' read P
C20963.1 uncharacterized tissue 3' read
BU601126.1 Clone IMAGE:6494998 mixed 5' read P
AA233102.1 Clone IMAGE:668551 mixed 5' read P
BU942870.1 Clone IMAGE:6716102 mixed 5' read P
AA243845.1 Clone IMAGE:668551 mixed 3' read PA
HY018045.1 Clone H04D061C21 testis
HY024896.1 Clone H04D085B10 testis P
HY026828.1 Clone H04D092A20 testis
HY201241.1 Clone H04D061C21 testis
HY208566.1 Clone H04D085B10 testis P
AA317766.1 eye 5' read P
T70321.1 Clone IMAGE:67042 mixed 3' read A
T70404.1 Clone IMAGE:67042 mixed 5' read
AA331300.1 embryonic tissue 5' read
AA341718.1 kidney 5' read
AA383229.1 testis 5' read
AA452005.1 Clone IMAGE:759494 embryonic tissue 5' read P
AA455555.1 Clone IMAGE:813450 mixed 5' read
T87339.1 Clone IMAGE:115452 mixed 3' read A
T87440.1 Clone IMAGE:115450 mixed 5' read
AA476324.1 Clone IMAGE:785081 embryonic tissue 3' read A
AA476374.1 Clone IMAGE:785081 embryonic tissue 5' read
AA815182.1 Clone IMAGE:1339895 lymph node 3' read
AA846749.1 Clone IMAGE:1404594 parathyroid 3' read PA
AA933567.1 Clone IMAGE:1551600 uncharacterized tissue 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help