> Tripartite motif containing 68 (TRIM68)
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UGID:914185     UniGene Hs.523438     Homo sapiens (human)   TRIM68 Order cDNA clone, Links
Tripartite motif containing 68 (TRIM68)

Human protein-coding gene TRIM68. Represented by 81 ESTs from 58 cDNA libraries. Corresponds to reference sequence NM_018073.6. [UniGene 914185 - Hs.523438]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_060543.5 TRIM68 gene product H. sapiens 100.0 484
XP_521739.2 PREDICTED: e3 ubiquitin-protein ligase TRIM68 isoform 2 P. troglodytes 99.8 484
NP_932129.2 Trim68 gene product M. musculus 83.7 484
NP_001070134.1 btr16 gene product D. rerio 45.8 177
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_001112587.1 PREDICTED: e3 ubiquitin-protein ligase TRIM68-like isoform 2 M. mulatta 98.8 484
XP_003910374.1 PREDICTED: E3 ubiquitin-protein ligase TRIM68 P. anubis 98.8 484

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; blood; placenta; prostate; uncharacterized tissue; parathyroid; mammary gland; intestine; testis; embryonic tissue; pituitary gland; kidney; pancreas; ovary; skin; connective tissue; trachea; eye; spleen; heart; mixed; bone; lung; uterus; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p15.4
UniSTS entry: Chr 11 STS-N39251
UniSTS entry: Chr 1 D8S2278
UniSTS entry: Chr 1 D11S2921
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

AK001231.1 Homo sapiens cDNA FLJ10369 fis, clone NT2RM2001575, weakly similar to 52 KD RO PROTEIN P
BC075058.2 Homo sapiens tripartite motif-containing 68, mRNA (cDNA clone MGC:103966 IMAGE:30915367), complete cds P
NM_018073.6 Homo sapiens tripartite motif containing 68 (TRIM68), mRNA PA
AK022923.1 Homo sapiens cDNA FLJ12861 fis, clone NT2RP2003564, weakly similar to 52 KD RO PROTEIN (SJOGREN SYNDROME TYPE A ANTIGEN (SS-A)) P
BC109063.2 Homo sapiens tripartite motif-containing 68, mRNA (cDNA clone MGC:126176 IMAGE:40033795), complete cds P
AF360739.1 Homo sapiens SSA protein SS-56 (SS-56) mRNA, complete cds PA
AF439153.1 Homo sapiens Ro/SSA1 related protein FLJ10369 mRNA, complete cds P
AK056523.1 Homo sapiens cDNA FLJ31961 fis, clone NT2RP7007537, highly similar to Homo sapiens tripartite motif-containing 68 (TRIM68), mRNA P
AK291166.1 Homo sapiens cDNA FLJ76714 complete cds, highly similar to Homo sapiens tripartite motif-containing 68 (TRIM68), mRNA P
AK310888.1 Homo sapiens cDNA, FLJ17930 P
AL832730.1 Homo sapiens mRNA; cDNA DKFZp686D0513 (from clone DKFZp686D0513) PA
AK301120.1 Homo sapiens cDNA FLJ54177 complete cds, highly similar to Homo sapiens tripartite motif-containing 68 (TRIM68), mRNA P
AY005802.1 Homo sapiens GC109 mRNA, partial cds P

EST sequences (81)

AI027507.1 Clone IMAGE:1650408 parathyroid 3' read A
BX118179.1 Clone IMAGp998K14611_;_IMAGE:276997 brain A
AI249155.1 Clone IMAGE:1849858 mixed 3' read A
CB217199.1 Clone IMAGE:5794930 bone 3' read A
AI695605.1 Clone IMAGE:2344473 intestine 3' read A
AI696899.1 Clone IMAGE:2324461 pancreas 3' read A
AI804762.1 Clone IMAGE:2253724 prostate 3' read A
AI810428.1 Clone IMAGE:2312386 prostate 3' read A
AI858536.1 Clone IMAGE:2429652 brain 3' read A
BX327429.2 Clone CS0DJ012YF22 blood 5' read P
BX350343.2 Clone CS0DJ012YF22 blood 3' read
BX417728.2 Clone CS0DE012YO05 placenta 5' read P
CD242763.1 Clone IMAGE:30383989 pituitary gland 5' read
CF144525.1 Clone IMAGE:30567907 prostate 5' read
CF144686.1 Clone IMAGE:30567993 prostate 5' read
AW274746.1 Clone IMAGE:2695620 kidney 3' read A
AW294298.1 Clone IMAGE:2726441 uncharacterized tissue 3' read A
AW438826.1 Clone IMAGE:2778176 uterus 3' read A
CD628937.1 uncharacterized tissue P
CD628938.1 uncharacterized tissue P
AW886949.1 ovary
CN332474.1 embryonic tissue 5' read P
AW966035.1 uncharacterized tissue
H26005.1 Clone IMAGE:161828 mammary gland 3' read
H26046.1 Clone IMAGE:161825 mammary gland 5' read
BE867271.1 Clone IMAGE:3846467 intestine 5' read P
DR005437.1 Clone TC108792 prostate 5' read P
DR158057.1 Clone IMAGE:7967037 embryonic tissue 5' read
AU124051.1 Clone NT2RM2001575 testis 5' read P
AU128493.1 Clone NT2RP2003564 testis 5' read P
BF195728.1 Clone IMAGE:3642506 kidney 3' read A
BF361075.1 ovary
DA051140.1 Clone BNGH42005794 brain 5' read P
DA031013.1 Clone ASTRO2015334 brain 5' read P
DA465049.1 Clone D3OST2002888 uncharacterized tissue 5' read P
DA577364.1 Clone HHDPC2005075 skin 5' read P
DA371883.1 Clone BRTHA2001936 brain 5' read
DA557250.1 Clone HCHON2007867 connective tissue 5' read P
DA493349.1 Clone FCBBF3005317 brain 5' read
AU150776.1 Clone NT2RP2003564 testis 3' read A
DA878054.1 Clone PROST2016707 prostate 5' read P
AU158008.1 Clone PLACE1010560 placenta 3' read A
DA878746.1 Clone PROST2017609 prostate 5' read P
DA999122.1 Clone TBAES2000464 mammary gland 5' read P
DA904851.1 Clone SKNMC2005313 brain 5' read P
DA833140.1 Clone PLACE1010560 placenta 5' read P
DB192118.1 Clone TOVAR2000154 ovary 5' read P
DB081560.1 Clone TESTI4027613 testis 5' read P
DB201094.1 Clone TRACH2010460 trachea 5' read P
DB322578.1 Clone NT2NE1000013 3' read A
DB199202.1 Clone TRACH2007617 trachea 5' read P
DB324856.1 Clone NT2RP7007537 testis 3' read A
DB175843.1 Clone TKIDN2012226 kidney 5' read P
DB511079.1 Clone H013023E06 testis 3' read A
AL559227.3 Clone CS0DJ012YF22 blood 5' read P
N39251.1 Clone IMAGE:276997 brain 3' read A
EC511946.1 prostate
EC555394.1 prostate
EC585108.1 prostate
BG401868.1 Clone IMAGE:4594553 kidney 5' read
N46696.1 Clone IMAGE:276997 brain 5' read
BI008463.1 kidney
DC389920.1 Clone SPLEN2014938 spleen 5' read P
BM548233.1 Clone IMAGE:5733931 brain 5' read
BM691007.1 Clone UI-E-CI1-aba-e-08-0-UI eye 5' read
W68592.1 Clone IMAGE:342571 heart 5' read
W68593.1 Clone IMAGE:342571 heart 3' read A
W70153.1 Clone IMAGE:344307 heart 3' read A
W70192.1 Clone IMAGE:344307 heart 5' read
BQ331968.1 lung
BU157563.1 Clone IMAGE:6082111 pancreas 5' read P
BU194619.1 Clone IMAGE:6110214 skin 5' read A
C02204.1 uncharacterized tissue
BU608835.1 Clone UI-CF-FN0-aeq-j-11-0-UI lung 3' read PA
BU726330.1 Clone UI-E-CI1-aba-e-08-0-UI eye 3' read A
HY210829.1 Clone H04D091N10 testis
HY223818.1 Clone H04D133F10 testis
HY225904.1 Clone H04D139I05 testis
AA364882.1 pineal gland 5' read
AA576931.1 Clone IMAGE:1073911 intestine 3' read A
AA595261.1 Clone IMAGE:1102486 prostate 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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