> TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa (TAF8)
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UGID:910869     UniGene Hs.520122     Homo sapiens (human)   TAF8 Order cDNA clone, Links
TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa (TAF8)

Human protein-coding gene TAF8. Represented by 174 ESTs from 81 cDNA libraries. Corresponds to reference sequence NM_138572.2. [UniGene 910869 - Hs.520122]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003897639.1 PREDICTED: transcription initiation factor TFIID subunit 8 P. anubis 100.0 309
XP_518472.2 PREDICTED: transcription initiation factor TFIID subunit 8 isoform 2 P. troglodytes 100.0 309
NP_612639.2 TAF8 gene product H. sapiens 100.0 309
XP_001085409.2 PREDICTED: transcription initiation factor TFIID subunit 8 M. mulatta 100.0 233
NP_071298.1 Taf8 gene product M. musculus 97.7 307
NP_001080509.1 transcription initiation factor TFIID subunit 8 X. laevis 89.2 287
NP_956580.1 taf8 gene product D. rerio 78.7 267
NP_523397.1 TBP-associated factor 8 D. melanogaster 48.0 198
Other hits (2 of 31) [Show all]SpeciesId(%)Len(aa)
NP_001094670.1 TAF8 gene product B. taurus 99.3 309
XP_538919.3 PREDICTED: transcription initiation factor TFIID subunit 8 isoform 2 C. lupus familiaris 99.3 306

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: ascites; uncharacterized tissue; kidney; thymus; testis; intestine; lung; pharynx; bone marrow; heart; mixed; blood; muscle; mouth; brain; prostate; stomach; mammary gland; cervix; pancreas; salivary gland; eye; uterus; skin; parathyroid; embryonic tissue; vascular; lymph node; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p21.1
UniSTS entry: Chr 6 RH102785
UniSTS entry: Chr 6 RH103892
UniSTS entry: Chr 1 D1S1425
UniSTS entry: Chr 1 D10S16
UniSTS entry: Chr 1 GDB:312714
UniSTS entry: Chr 1 GDB:315881
UniSTS entry: Chr 1 D15S1477
UniSTS entry: Chr 1 G35510
UniSTS entry: Chr 1 RH80031
UniSTS entry: Chr 1 D1S1423
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

AF465841.1 Homo sapiens TBP-associated factor TAFII43 (TAFII43) mRNA, complete cds P
BC119679.1 Homo sapiens TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa, mRNA (cDNA clone MGC:149564 IMAGE:40116290), complete cds P
BC119678.1 Homo sapiens TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa, mRNA (cDNA clone MGC:149563 IMAGE:40116287), complete cds P
AK057383.1 Homo sapiens cDNA FLJ32821 fis, clone TESTI2003005, highly similar to Mus musculus taube nuss mRNA P
NM_138572.2 Homo sapiens TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa (TAF8), mRNA P
AL833401.1 Homo sapiens mRNA; cDNA DKFZp313E0720 (from clone DKFZp313E0720) P
AK303097.1 Homo sapiens cDNA FLJ57866 complete cds, highly similar to Homo sapiens TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, mRNA P
AF086309.1 Homo sapiens full length insert cDNA clone ZD51E07 A

EST sequences (174)

AA983184.1 Clone IMAGE:1590007 kidney 3' read A
AI027324.1 Clone IMAGE:1649846 parathyroid 3' read A
AI027325.1 Clone IMAGE:1649848 parathyroid 3' read A
AI151131.1 Clone IMAGE:1703780 brain 3' read P
AI313120.1 Clone IMAGE:1928907 lung 3' read
AI650616.1 Clone IMAGE:2304432 uncharacterized tissue 3' read
AI655948.1 Clone IMAGE:2243388 uncharacterized tissue 3' read A
AI659647.1 Clone IMAGE:2252054 prostate 3' read
AI738942.1 Clone IMAGE:2390030 intestine 3' read P
AI797164.1 Clone IMAGE:2342347 lung 3' read
AI969618.1 Clone IMAGE:2563313 skin 3' read
AI969977.1 Clone IMAGE:2477415 prostate 3' read
CD299467.1 Clone IMAGE:30402680 vascular 5' read P
CD389341.1 embryonic tissue 5' read P
CF139158.1 Clone IMAGE:3096272 prostate 5' read
AW175684.1 mammary gland
BX646274.1 Clone DKFZp781G2367 uncharacterized tissue 5' read
AW263338.1 Clone IMAGE:2757650 brain 3' read A
AW376544.1 intestine
AW376545.1 intestine
AW473694.1 Clone IMAGE:2853380 uterus 3' read A
CD636446.1 uncharacterized tissue
CD636447.1 uncharacterized tissue
CD636448.1 uncharacterized tissue
CD636449.1 uncharacterized tissue
CD636450.1 uncharacterized tissue
CD636451.1 uncharacterized tissue
CD636452.1 uncharacterized tissue
CD636453.1 uncharacterized tissue
CD636454.1 uncharacterized tissue
CD636439.1 uncharacterized tissue
CD636440.1 uncharacterized tissue
CD636441.1 uncharacterized tissue
CD636442.1 uncharacterized tissue
CD636443.1 uncharacterized tissue
CD636444.1 uncharacterized tissue
CD636445.1 uncharacterized tissue
CD636455.1 uncharacterized tissue
CD636456.1 uncharacterized tissue
CD636457.1 uncharacterized tissue
CD636458.1 uncharacterized tissue
AW752611.1 intestine
AW752645.1 intestine
AW752671.1 intestine
AW752685.1 intestine
AW807618.1 stomach
AW808941.1 stomach
AW815571.1 stomach
AW815581.1 stomach
CK825713.1 Clone IMAGE:5782062 pancreas 3' read
AW848351.1 intestine
AW848494.1 intestine
AW848640.1 intestine
AW848783.1 intestine
AW848914.1 intestine
AW848915.1 intestine
AW848975.1 intestine
AW848977.1 intestine
AW849049.1 intestine
AW849157.1 intestine
CN415010.1 embryonic tissue 5' read
BE007680.1 mammary gland
BE060979.1 mammary gland
BE061111.1 mammary gland
BE061158.1 mammary gland
BE061161.1 mammary gland
BE061163.1 mammary gland
BE151561.1 mouth
BE256788.1 Clone IMAGE:3352684 eye 5' read P
CV030689.1 mixed 5' read P
CR746238.1 Clone IMAGp998J105334_;_IMAGE:2160105 kidney 5' read P
CR739074.1 Clone IMAGp971F0428_;_IMAGE:290283 brain 5' read P
BE299218.1 Clone IMAGE:3027950 muscle 5' read A
BP259108.1 Clone HRT05622 heart 5' read P
BP282696.1 Clone KMR04805 bone marrow 5' read P
BP283126.1 Clone KMR05892 bone marrow 5' read P
BP380302.1 Clone WMD09252 uterus 5' read P
CV358583.1 mammary gland
CV575793.1 Clone oe40e06 eye 5' read
BE717389.1 pharynx
BE841630.1 stomach
BE893081.1 Clone IMAGE:3921568 skin 5' read P
AV736374.1 Clone CBMAVE03 blood 5' read A
AV759157.1 Clone MDSAJC07 bone marrow 5' read P
CR995730.1 Clone RZPDp9016N0142 uncharacterized tissue 5' read P
DA125660.1 Clone BRACE3048439 brain 5' read P
DA122827.1 Clone BRACE3044489 brain 5' read P
DA345384.1 Clone BRSSN2006101 brain 5' read
DA442099.1 Clone CTONG2011331 mouth 5' read P
DA410223.1 Clone BRTHA3016913 brain 5' read P
DA678592.1 Clone NHNPC2000278 uncharacterized tissue 5' read P
BF432334.1 Clone IMAGE:3275484 brain 3' read P
DB022146.1 Clone TESTI2003005 testis 5' read P
DA872883.1 Clone PROST2009961 prostate 5' read P
BF513107.1 Clone IMAGE:3070585 uncharacterized tissue 3' read A
DB336043.1 Clone TESTI2003005 testis 3' read A
DB108502.1 Clone THYMU2010842 thymus 5' read
DB268757.1 Clone UTERU2029483 uterus 5' read P
BF749981.1 mammary gland
DB134669.1 Clone THYMU3005361 thymus 5' read P
DB101333.1 Clone THYMU1000701 thymus 5' read
BF758200.1 intestine
BF981598.1 Clone IMAGE:4400829 intestine 5' read P
BF963842.1 brain
D45309.1 brain
BG149724.1 Clone IMAGE:3367183 lung 3' read A
BG259111.1 Clone IMAGE:4509904 uncharacterized tissue 5' read
BG328383.1 Clone IMAGE:4547042 intestine 5' read
N71758.1 Clone IMAGE:290667 skin 3' read A
N72591.1 Clone IMAGE:295618 mixed 3' read A
BI014588.1 lung
BG943919.1 Clone ax43f11 blood A
BI260232.1 Clone IMAGE:5109574 cervix 5' read P
BI334711.1 Clone IMAGE:5141641 cervix 5' read P
DC376091.1 Clone OCBBF2029781 brain 5' read P
DC405015.1 Clone THYMU2005485 thymus 5' read P
EL947339.1 eye 5' read
BI828714.1 Clone IMAGE:5166848 brain 5' read P
BM043846.1 Clone IMAGE:5446373 prostate 5' read P
BM043904.1 Clone IMAGE:5446374 prostate 5' read P
BM741104.1 Clone S6SNU620-3-D02 ascites 5' read P
BM741109.1 Clone S6SNU620-3-D07 ascites 5' read P
BM741143.1 Clone S6SNU620-3-H03 ascites 5' read P
BM743312.1 Clone S6SNU620-9-B01 ascites 5' read P
BM745149.1 Clone S6SNU620-12-D03 ascites 5' read P
BM748290.1 Clone S8SNU638-14-F01 ascites 5' read P
BM748366.1 Clone S8SNU638-5-H03 ascites 5' read P
BM746812.1 Clone S6SNU620-18-D05 ascites 5' read P
BM747074.1 Clone S6SNU620s1-2-F10 ascites 5' read P
BM748450.1 Clone S8SNU638-3-D09 ascites 5' read P
BM748502.1 Clone S8SNU638-2-D03 ascites 5' read P
BM749262.1 Clone S8SNU638-6-G07 ascites 5' read P
BM749745.1 Clone S8SNU638-8-G01 ascites 5' read P
BM749804.1 Clone S8SNU638-18-H09 ascites 5' read P
BM750602.1 Clone S8SNU638-9-A11 ascites 5' read P
BM755747.1 Clone S8SNU638-33-B07 ascites 5' read P
BM756230.1 Clone S6SNU620-28-B03 ascites 5' read P
BM756275.1 Clone S6SNU620-28-F03 ascites 5' read P
BM757514.1 Clone S8SNU638-27-H02 ascites 5' read P
BM757582.1 Clone S8SNU638-30-G10 ascites 5' read P
BM757583.1 Clone S8SNU638-30-G12 ascites 5' read P
BM757627.1 Clone S8SNU638-23-E06 ascites 5' read P
BM758051.1 Clone S8SNU638-29-G09 ascites 5' read P
BM758085.1 Clone S8SNU638-33-F03 ascites 5' read P
BM758091.1 Clone S8SNU638-33-F10 ascites 5' read P
BM758180.1 Clone S8SNU638-32-C10 ascites 5' read P
BM758722.1 Clone S8SNU638-28-D10 ascites 5' read P
BM758723.1 Clone S8SNU638-28-D11 ascites 5' read P
BM758727.1 Clone S8SNU638-28-G05 ascites 5' read P
BM758728.1 Clone S8SNU638-28-G06 ascites 5' read P
BM758732.1 Clone S8SNU638-28-H03 ascites 5' read P
BM758910.1 Clone S8SNU638-24-D10 ascites 5' read P
BM759016.1 Clone S8SNU638-25-H12 ascites 5' read P
BM785433.1 Clone S6SNU620-33-F04 ascites 5' read P
W69744.1 Clone IMAGE:344196 heart 3' read
W69925.1 Clone IMAGE:344196 heart 5' read
BQ053822.1 Clone IMAGE:5935720 blood 5' read
BQ269293.1 Clone IMAGE:5782062 pancreas 5' read
BQ321092.1 intestine
BQ437299.1 Clone IMAGE:6156174 uterus 5' read P
BQ669192.1 Clone IMAGE:6211291 salivary gland 5' read PA
BQ671438.1 Clone IMAGE:6277263 salivary gland 5' read PA
BQ671755.1 Clone IMAGE:6256980 salivary gland 5' read P
BQ671782.1 Clone IMAGE:6255490 salivary gland 5' read
BQ672575.1 Clone IMAGE:6254913 salivary gland 5' read
BQ674243.1 Clone IMAGE:6277231 salivary gland 5' read
BM151927.1 Clone TCBAP1144 lymph node P
BU189966.1 Clone IMAGE:6172205 eye 5' read P
BU146297.1 Clone IMAGE:6212454 salivary gland 5' read P
BU599837.1 Clone IMAGE:6463150 mixed 5' read P
BU933928.1 Clone IMAGE:6699165 mixed 5' read
CA430966.1 Clone UI-H-FL1-bge-e-20-0-UI bone 3' read P
AA641254.1 Clone IMAGE:1173714 prostate 3' read P
AA664061.1 Clone IMAGE:855810 lung 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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