> Retrotransposon gag domain containing 4 (RGAG4)
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UGID:902927     UniGene Hs.512180     Homo sapiens (human)   RGAG4 Order cDNA clone, Links
Retrotransposon gag domain containing 4 (RGAG4)

Human protein-coding gene RGAG4. Represented by 69 ESTs from 42 cDNA libraries. Corresponds to reference sequence NM_001024455.3. [UniGene 902927 - Hs.512180]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001019626.1 RGAG4 gene product H. sapiens 100.0 568
XP_003954070.1 PREDICTED: retrotransposon gag domain-containing protein 4 P. troglodytes 99.6 516
NP_899141.1 Rgag4 gene product M. musculus 78.1 598
Other hits (2 of 3) [Show all]SpeciesId(%)Len(aa)
XP_003917919.1 PREDICTED: retrotransposon gag domain-containing protein 4 P. anubis 97.0 566
XP_004022230.1 PREDICTED: retrotransposon gag domain-containing protein 4 O. aries 85.9 565

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; lung; pancreas; embryonic tissue; uterus; uncharacterized tissue; heart; thyroid; kidney; eye; pituitary gland; testis; adrenal gland; connective tissue; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xq13.1
UniSTS entry: Chr X A007B16
UniSTS entry: Chr X AF020216
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AL359579.2 Homo sapiens mRNA; cDNA DKFZp761M2214 (from clone DKFZp761M2214) PA
NM_001024455.3 Homo sapiens retrotransposon gag domain containing 4 (RGAG4), mRNA PA
BC151224.1 Homo sapiens retrotransposon gag domain containing 4, mRNA (cDNA clone MGC:166799 IMAGE:9007468), complete cds P
AB082532.1 Homo sapiens mRNA for KIAA2001 protein P

EST sequences (69)

AA971871.1 Clone IMAGE:1584789 lung 3' read A
AA927892.1 Clone IMAGE:1541383 mixed 3' read A
AA947877.1 Clone IMAGE:1508511 mixed 3' read A
T06352.1 Clone HFBDS30 brain
BX096097.1 Clone IMAGp998O021114_;_IMAGE:470233 uterus
AI206716.1 Clone IMAGE:1754491 testis 3' read A
AI204176.1 Clone IMAGE:1734847 testis 3' read A
AI288468.1 Clone IMAGE:1878673 mixed 3' read A
AI351947.1 Clone IMAGE:1933281 mixed 3' read A
AI369609.1 Clone IMAGE:2017396 brain 3' read A
AI369787.1 Clone IMAGE:2017601 brain 3' read A
AI458396.1 Clone IMAGE:2149220 lung 3' read P
R52787.1 Clone IMAGE:41540 brain 5' read
AI769062.1 Clone IMAGE:2366794 mixed 3' read A
AI804378.1 Clone IMAGE:2069230 mixed 3' read A
AI887971.1 Clone IMAGE:2151047 lung 3' read P
CD513383.1 Clone IMAGE:30393122 pituitary gland 5' read
AW135185.1 Clone IMAGE:2713723 mixed 3' read A
AW192410.1 Clone IMAGE:2681282 pancreas 3' read A
AW206976.1 Clone IMAGE:2723178 mixed 3' read A
AW250480.1 Clone IMAGE:2821608 lung 5' read
CK823539.1 Clone IMAGE:6136523 pancreas 3' read A
CK823540.1 Clone IMAGE:6136523 pancreas 5' read
AW955167.1 uncharacterized tissue
CN302265.1 embryonic tissue 5' read P
CN302266.1 embryonic tissue 5' read P
CN302264.1 embryonic tissue 5' read P
H08103.1 Clone IMAGE:45250 brain 5' read
T23512.1 Clone Hy18-Charon40-cDNA-202 brain 3' read
BE260820.1 Clone IMAGE:3503100 brain 5' read
BE348492.1 Clone IMAGE:3152034 lung 3' read A
BE348679.1 Clone IMAGE:3151792 lung 3' read A
T12035.1 Clone A718 heart
T12036.1 Clone A718 heart
BE886500.1 Clone IMAGE:3910108 uterus 5' read P
DR003419.1 Clone TC103252 brain 5' read P
BE903904.1 Clone IMAGE:3896794 pancreas 5' read
AV705770.1 Clone ADBAUH03 adrenal gland 5' read
AV746963.1 Clone NPCALH09 pituitary gland 5' read
AV749497.1 Clone NPCBVE12 pituitary gland 5' read
BF317137.1 Clone IMAGE:4130413 brain 5' read
BF444929.1 Clone IMAGE:3365767 lung 3' read A
BF526647.1 Clone IMAGE:4213579 brain 5' read
BF475306.1 Clone IMAGE:3707313 lung 3' read A
BF820560.1 kidney
BF961352.1 brain P
BG820224.1 Clone IMAGE:4932980 brain 5' read A
BG820684.1 Clone IMAGE:4931520 brain 5' read
BI002015.1 thyroid
BI195138.1 Clone IMAGE:5092162 brain 5' read
BI195139.1 Clone IMAGE:5092210 brain 5' read
BI489712.1 Clone IMAGE:5173392 mixed 5' read
BM548681.1 Clone IMAGE:5732229 brain 5' read
BM673840.1 Clone UI-E-EJ0-ahh-b-06-0-UI eye 3' read A
BM676932.1 Clone UI-E-EO1-aib-o-13-0-UI eye 3' read A
BM716965.1 Clone UI-E-EJ0-ahh-b-06-0-UI eye 5' read
BM720826.1 Clone UI-E-EO1-aib-o-13-0-UI eye 5' read
BM893994.1 Clone IMAGE:6136523 pancreas 3' read A
BM967353.1 Clone IMAGE:6136523 pancreas 5' read
BQ301717.1 thyroid
AA028890.1 Clone IMAGE:470233 uterus 3' read A
AA029003.1 Clone IMAGE:470233 uterus 5' read
BF922640.1 brain
BF922661.1 brain
BF928231.1 brain
CA449911.1 Clone UI-H-EI1-azf-i-06-0-UI connective tissue 3' read A
AA323704.1 brain 5' read
AA782058.1 Clone 1360105 parathyroid 3' read A
T05224.1 Clone HFBCT49 brain


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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