> Chemokine (C-C motif) ligand 19 (CCL19)
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UGID:137894     UniGene Hs.50002     Homo sapiens (human)   CCL19 Order cDNA clone, Links
Chemokine (C-C motif) ligand 19 (CCL19)

Human protein-coding gene CCL19. Represented by 91 ESTs from 36 cDNA libraries. Corresponds to reference sequence NM_006274.2. [UniGene 137894 - Hs.50002]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001164037.2 PREDICTED: c-C motif chemokine 19 isoform 1 P. troglodytes 100.0 97
NP_006265.1 CCL19 gene product H. sapiens 100.0 97
XP_001472218.1 PREDICTED: c-C motif chemokine 19-like M. musculus 78.2 101
Other hits (2 of 4) [Show all]SpeciesId(%)Len(aa)
NP_001028131.1 CCL19 gene product M. mulatta 98.0 97
XP_003911609.1 PREDICTED: c-C motif chemokine 19 P. anubis 98.0 97

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: pharynx; vascular; lung; mixed; thymus; lymph node; prostate; uncharacterized tissue; heart; brain; eye; larynx; stomach; connective tissue; pancreas; spleen; intestine; mammary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9p13
UniSTS entry: Chr 9 RH91355
UniSTS entry: Chr 9 STS-U77180 [Map Viewer]
UniSTS entry: Chr 9 SHGC-37670 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

NM_006274.2 Homo sapiens chemokine (C-C motif) ligand 19 (CCL19), mRNA P
CR456868.1 Homo sapiens full open reading frame cDNA clone RZPDo834G0715D for gene CCL19, chemokine (C-C motif) ligand 19; complete cds, incl. stopcodon P
AK311945.1 Homo sapiens cDNA, FLJ92213, Homo sapiens chemokine (C-C motif) ligand 19 (CCL19), mRNA P
BC027968.1 Homo sapiens chemokine (C-C motif) ligand 19, mRNA (cDNA clone MGC:34433 IMAGE:5225849), complete cds PA
U77180.1 Human macrophage inflammatory protein 3 beta (MIP-3beta) mRNA, complete cds P
AB000887.1 Homo sapiens ELC mRNA for EBI1-ligand chemokine, complete cds P
U88321.1 Human beta chemokine Exodus-3 mRNA, complete cds P

EST sequences (91)

AI096411.1 Clone IMAGE:1707527 heart 3' read PA
BX105269.1 Clone IMAGp998P21668_;_IMAGE:299012 lung PA
AI186175.1 Clone IMAGE:1742023 lung 3' read PA
AI253509.1 Clone IMAGE:2032711 prostate 3' read A
AI224509.1 Clone IMAGE:1858420 mixed 3' read A
AI300458.1 Clone IMAGE:1908440 lung 3' read A
AI434231.1 Clone IMAGE:2132237 lymph node 3' read A
AI523424.1 Clone IMAGE:2128186 vascular 3' read PA
AI523429.1 Clone IMAGE:2128196 vascular 3' read
AI523431.1 Clone IMAGE:2128183 vascular 3' read P
AI523473.1 Clone IMAGE:2128210 vascular 3' read P
AI581755.1 Clone IMAGE:2128387 vascular 3' read A
AI626025.1 Clone IMAGE:2128529 vascular 3' read A
AI660682.1 Clone IMAGE:2351451 intestine 3' read PA
AI707962.1 Clone IMAGE:2318344 vascular 3' read A
AI707984.1 Clone IMAGE:2318369 vascular 3' read A
AI708388.1 Clone IMAGE:2354968 vascular 3' read A
AI709311.1 Clone IMAGE:2353922 vascular 3' read PA
AI718724.1 Clone IMAGE:2353390 vascular 3' read A
AI719120.1 Clone IMAGE:2354061 vascular 3' read A
AI719843.1 Clone IMAGE:2353995 vascular 3' read PA
AI735563.1 Clone IMAGE:2355424 vascular 3' read A
AI735583.1 Clone IMAGE:2355437 vascular 3' read P
AI802183.1 Clone IMAGE:2270595 lung 3' read A
AI880647.1 Clone IMAGE:2354256 vascular 3' read PA
AI950778.1 Clone IMAGE:2547528 lung 3' read PA
BX414711.2 Clone CS0CAP002YO17 thymus 3' read P
BX414712.2 Clone CS0CAP002YO17 thymus 5' read P
CD686299.1 pharynx P
CD686752.1 pharynx P
CD686355.1 pharynx P
CD689032.1 pharynx P
CD689622.1 pharynx P
CD692586.1 pharynx
CD696746.1 pharynx P
CD693621.1 pharynx P
CD696503.1 pharynx P
CD696801.1 pharynx P
CD698265.1 pharynx P
CD702223.1 pharynx P
CD707708.1 pharynx P
CD708108.1 pharynx P
CD709052.1 pharynx P
CD709993.1 pharynx
CD697572.1 pharynx P
CD701606.1 pharynx P
CD704468.1 pharynx P
CD706709.1 pharynx P
CD706787.1 pharynx P
CD708066.1 pharynx
CD708707.1 pharynx
CD622294.1 uncharacterized tissue P
CD622295.1 uncharacterized tissue
CV029558.1 mixed 5' read P
BP317531.1 Clone PCD03929 heart 5' read P
BF001364.1 Clone IMAGE:3311105 prostate 3' read PA
AV727235.1 Clone HTCBHC10 brain 5' read P
DA382257.1 Clone BRTHA2016102 brain 5' read
DA943893.1 Clone SPLEN2018917 spleen 5' read P
BF477915.1 Clone IMAGE:3707019 lung 3' read A
DB153510.1 Clone THYMU3031140 thymus 5' read P
BF824770.1 larynx
BG151304.1 Clone IMAGE:4261979 mixed 5' read P
D31180.1 lung 5' read
D31431.1 lung 5' read
N71167.1 Clone IMAGE:299012 lung 3' read A
N80273.1 Clone IMAGE:300411 lung 3' read A
BI521023.1 Clone IMAGE:5220889 mixed 5' read P
BI521981.1 Clone IMAGE:5220889 mixed 3' read
BI823250.1 Clone IMAGE:5180311 mixed 5' read P
BI837646.1 Clone IMAGE:5225849 mixed 5' read P
W05519.1 Clone IMAGE:299012 lung 5' read P
W07401.1 Clone IMAGE:300411 lung 5' read
BM688801.1 Clone UI-E-CQ1-acr-b-09-0-UI brain 5' read
BM720436.1 Clone UI-E-EJ0-ahv-c-02-0-UI eye 5' read
BM768365.1 Clone S14K402-8-C12 stomach 5' read A
BM768409.1 Clone S14K402-8-G12 stomach 5' read
BQ005590.1 Clone IMAGE:5848773 connective tissue 3' read PA
BU075285.1 Clone IMAGE: pancreas 5' read P
BU076825.1 Clone IMAGE: pancreas 3' read PA
BU077164.1 Clone IMAGE: pancreas 5' read P
FN108584.1 Clone 141142_1379_2082
FN163881.1 Clone 273218_3476_3947
FN047464.1 Clone 003293_1242_2896
BU740359.1 Clone UI-E-EJ0-ahv-c-02-0-UI eye 3' read A
AA302958.1 spleen 3' read A
AA302959.1 spleen 5' read
T97490.1 Clone IMAGE:121481 mixed 5' read
AA632091.1 Clone IMAGE:1131292 mammary gland 3' read A
AA585171.1 thymus
AA680186.1 Clone IMAGE:430465 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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