> Coiled-coil domain containing 111 (CCDC111)
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UGID:696466     UniGene Hs.481307     Homo sapiens (human)   CCDC111 Order cDNA clone, Links
Coiled-coil domain containing 111 (CCDC111)

Human protein-coding gene CCDC111. Represented by 106 ESTs from 68 cDNA libraries. Corresponds to reference sequence NM_152683.2. [UniGene 696466 - Hs.481307]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_689896.1 CCDC111 gene product H. sapiens 100.0 559
NP_001001184.1 Ccdc111 gene product M. musculus 83.2 535
NP_001032455.1 zgc:123274 gene product D. rerio 57.6 517
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_001162592.1 PREDICTED: coiled-coil domain-containing protein 111 isoform 2 P. troglodytes 99.3 559
XP_003899457.1 PREDICTED: coiled-coil domain-containing protein 111 P. anubis 96.8 555

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uterus; kidney; heart; bladder; testis; vascular; intestine; adrenal gland; connective tissue; muscle; pancreas; mixed; uncharacterized tissue; lung; stomach; placenta; prostate; embryonic tissue; liver; ear; eye; bone marrow; skin; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q35.1
UniSTS entry: Chr 11 RH67709
UniSTS entry: Chr 11 G33016
UniSTS entry: Chr 11 SHGC-35919 [Map Viewer]
UniSTS entry: Chr 11 RH76703
UniSTS entry: Chr 4 SHGC-68220
UniSTS entry: Chr 4 SHGC-50366
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

BC047467.1 Homo sapiens hypothetical protein FLJ33167, mRNA (cDNA clone IMAGE:5303049) PA
BX647575.1 Homo sapiens mRNA; cDNA DKFZp313L1724 (from clone DKFZp313L1724) PA
BC064600.1 Homo sapiens coiled-coil domain containing 111, mRNA (cDNA clone MGC:70479 IMAGE:5786393), complete cds PA
AK057729.1 Homo sapiens cDNA FLJ33167 fis, clone UTERU2000569 P
AK307317.1 Homo sapiens cDNA, FLJ97265 P
NM_152683.2 Homo sapiens coiled-coil domain containing 111 (CCDC111), mRNA P
BC018930.2 Homo sapiens hypothetical protein FLJ33167, mRNA (cDNA clone IMAGE:4303245), partial cds PA

EST sequences (106)

AA954268.1 Clone IMAGE:1562238 mixed 3' read A
AI015018.1 Clone IMAGE:1618283 testis 3' read A
AI168448.1 Clone IMAGE:1509369 mixed 3' read
CB112555.1 Clone L6ChoCK0-4-G02 liver 5' read P
AI275986.1 Clone IMAGE:1990420 uterus 3' read PA
AI333972.1 Clone IMAGE:1934235 mixed 3' read PA
AI467831.1 Clone IMAGE:2147631 mixed 3' read A
AI570308.1 Clone IMAGE:2184319 stomach 3' read A
AI597784.1 Clone IMAGE:2226590 pancreas 3' read A
AI687165.1 Clone IMAGE:2205635 uterus 3' read PA
AI802433.1 Clone IMAGE:2066456 embryonic tissue 3' read PA
AI803625.1 Clone IMAGE:2067355 embryonic tissue 3' read PA
CB991205.1 Clone IMAGE:30339349 placenta 5' read P
BX391785.2 Clone CS0DI076YD16 placenta 3' read PA
BX369346.2 Clone CS0DI076YD16 placenta 5' read P
AI983478.1 Clone IMAGE:2510817 pancreas 3' read PA
BX482460.1 Clone DKFZp686P13230 muscle 5' read
CF130286.1 Clone IMAGE:30562445 lung 5' read
AU252987.1 Clone Nbla03283 brain 5' read P
AU252988.1 Clone Nbla03283 brain 3' read P
AW194451.1 Clone IMAGE:2684407 uterus 3' read P
AW386702.1 uncharacterized tissue P
AW593220.1 Clone IMAGE:2945288 mixed 3' read PA
BX956619.1 Clone DKFZp781D1085 uncharacterized tissue 5' read
AW978939.1 uncharacterized tissue
CR739593.1 Clone IMAGp998C244747_;_IMAGE:1934543 uncharacterized tissue 5' read P
CR743077.1 Clone IMAGp998L042458_;_IMAGE:986259 prostate 5' read P
BP245596.1 Clone HKR03640 kidney 5' read
BP246441.1 Clone HKR06170 kidney 5' read P
BP247680.1 Clone HKR09066 kidney 5' read P
BP259742.1 Clone HRT07589 heart 5' read P
BP335284.1 Clone SMR00965 vascular 5' read P
CV340357.1 intestine
BE866195.1 Clone IMAGE:3961965 bladder 5' read P
DN994668.1 Clone TC100629 brain 5' read
DR001967.1 Clone TC103611 brain 5' read P
BE909251.1 Clone IMAGE:3901634 pancreas 5' read PA
DR157464.1 Clone IMAGE:7966128 embryonic tissue 5' read
AV758242.1 Clone BMFALH07 bone marrow 5' read P
BF339579.1 Clone IMAGE:4186955 brain 5' read
AA716644.1 Clone IMAGE:398748 heart 3' read A
AA716722.1 Clone IMAGE:398772 heart 3' read PA
DA267645.1 Clone BRCAN2021371 brain 5' read P
DA007959.1 Clone ACTVT2000271 uncharacterized tissue 5' read P
DA052097.1 Clone BNGH42007245 brain 5' read
DA093070.1 Clone BRACE3001691 brain 5' read P
BF680746.1 Clone IMAGE:4296115 prostate 5' read P
BF684944.1 Clone IMAGE:4303245 uterus 5' read P
DA341023.1 Clone BRSSN2000235 brain 5' read P
DA041444.1 Clone BLADE2002868 bladder 5' read P
DA041829.1 Clone BLADE2003361 bladder 5' read P
DA010567.1 Clone ADRGL2002193 adrenal gland 5' read P
DA424360.1 Clone CHONS2002087 connective tissue 5' read P
DA624230.1 Clone KIDNE2003963 kidney 5' read
DB034734.1 Clone TESTI2019901 testis 5' read P
DA917303.1 Clone SMINT2001930 intestine 5' read P
BF436296.1 Clone IMAGE:3269221 mixed 3' read A
DB350931.1 Clone UTERU2000569 uterus 3' read PA
DB172215.1 Clone TKIDN2007410 kidney 5' read P
DB247871.1 Clone UTERU2000569 uterus 5' read P
DB256895.1 Clone UTERU2012820 uterus 5' read P
H89091.1 Clone IMAGE:253238 ear 3' read
DB559938.1 Clone H033031N16 brain 3' read A
DB490161.1 Clone H033031N16 brain 5' read
AL553438.3 Clone CS0DI076YD16 placenta 5' read P
AL576544.2 Clone CS0DI076YD16 placenta 3' read P
BG427920.1 Clone IMAGE:4614002 kidney 5' read P
BG504811.1 Clone IMAGE:4664647 testis 5' read P
N48318.1 Clone IMAGE:279668 brain 3' read A
BG182311.1 connective tissue P
BG185449.1 connective tissue PA
BG190237.1 connective tissue PA
BG195324.1 connective tissue PA
BG195958.1 connective tissue PA
BG206696.1 connective tissue P
BG208238.1 connective tissue PA
BG209330.1 connective tissue P
BG211359.1 connective tissue PA
BG214563.1 connective tissue PA
BG217229.1 connective tissue PA
BI600050.1 Clone IMAGE:5303049 brain 5' read
BI755144.1 Clone IMAGE:5193140 brain 5' read P
BM459701.1 Clone IMAGE:5534333 uterus 5' read P
W70326.1 Clone IMAGE:345783 heart 3' read A
W78190.1 Clone IMAGE:345783 heart 5' read P
W80857.1 Clone IMAGE:356787 heart 3' read PA
W80959.1 Clone IMAGE:356791 heart 5' read
BM987626.1 Clone IMAGE:5859190 uncharacterized tissue 3' read PA
BQ068234.1 Clone IMAGE:5770472 brain 5' read P
BQ185248.1 Clone UI-E-EJ1-aju-g-12-0-UI eye 3' read PA
BQ188070.1 Clone UI-E-EJ1-aju-g-12-0-UI eye 5' read PA
BQ230773.1 Clone IMAGE:5786393 uterus 5' read P
BQ438097.1 Clone IMAGE:6167831 skin 5' read P
GD136291.1 3' read A
AA136617.1 Clone IMAGE:490944 uterus 3' read A
BU596909.1 Clone IMAGE:6453635 mixed 5' read
HY031107.1 Clone H04D107N15 testis
HY215693.1 Clone H04D107N15 testis P
CA312288.1 Clone UI-CF-FN0-afm-l-07-0-UI lung 3' read PA
T89139.1 Clone IMAGE:117536 lung 3' read A
T89232.1 Clone IMAGE:117536 lung 5' read P
AA532531.1 Clone IMAGE:986285 prostate 3' read A
AA687823.1 Clone IMAGE:1220007 prostate 3' read A
AA827625.1 Clone IMAGE:1371882 lymph node 3' read P
AA873626.1 Clone IMAGE:1323461 kidney 3' read A
AA931259.1 Clone IMAGE:1554278 kidney 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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