> Fermitin family member 1 (FERMT1)
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UGID:687213     UniGene Hs.472054     Homo sapiens (human)   FERMT1 Order cDNA clone, Links
Fermitin family member 1 (FERMT1)

Human protein-coding gene FERMT1. Represented by 147 ESTs from 83 cDNA libraries. EST representation biased toward embryoid body. Corresponds to reference sequence NM_017671.4. [UniGene 687213 - Hs.472054]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_060141.3 FERMT1 gene product H. sapiens 100.0 676
NP_932146.2 Fermt1 gene product M. musculus 89.4 676
NP_001079432.1 fermitin family member 1 X. laevis 80.5 665
XP_002665831.2 PREDICTED: fermitin family homolog 1-like D. rerio 72.8 662
NP_506628.1 Protein UNC-112 C. elegans 49.6 431
NP_728936.1 fermitin 1, isoform A D. melanogaster 48.3 435
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_001115968.1 PREDICTED: fermitin family homolog 1-like isoform 4 M. mulatta 99.3 676
XP_003905104.1 PREDICTED: fermitin family homolog 1-like, partial P. anubis 99.2 530

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: embryoid body [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: intestine; embryonic tissue; brain; liver; uncharacterized tissue; mixed; pancreas; skin; mouth; lung; ovary; trachea; bladder; stomach; prostate; pharynx; kidney; placenta; lymph node; connective tissue; heart; cervix; eye; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20p12.3
UniSTS entry: Chr 20 RH99293
UniSTS entry: Chr 20 SHGC-56771
UniSTS entry: Chr 20 MARC_15247-15248:1012578424:3
UniSTS entry: Chr 20 RH48439 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (13)

BX647465.1 Homo sapiens mRNA; cDNA DKFZp686B0715 (from clone DKFZp686B0715) PA
AY137240.1 Homo sapiens Kindler syndrome protein (KIND1) mRNA, complete cds P
AB105105.1 Homo sapiens mRNA for DTGCU2, complete cds PA
AK000123.1 Homo sapiens cDNA FLJ20116 fis, clone COL05655 PA
AK000747.1 Homo sapiens cDNA FLJ20740 fis, clone HEP07118 P
NM_017671.4 Homo sapiens fermitin family member 1 (FERMT1), mRNA PA
AK027076.1 Homo sapiens cDNA: FLJ23423 fis, clone HEP22557 PA
AK225216.1 Homo sapiens mRNA for Unc-112 related protein 1 variant, clone: COL05655 PA
AK314394.1 Homo sapiens cDNA, FLJ95169 P
AK092195.1 Homo sapiens cDNA FLJ34876 fis, clone NT2NE2015362, moderately similar to Mitogen inducible gene mig-2 P
BC035882.1 Homo sapiens fermitin family homolog 1 (Drosophila), mRNA (cDNA clone MGC:46404 IMAGE:4941567), complete cds PA
AF443278.1 Homo sapiens URP1 (URP1) mRNA, complete cds P
BC040545.1 Homo sapiens fermitin family homolog 1 (Drosophila), mRNA (cDNA clone MGC:39737 IMAGE:5277060), complete cds PA

EST sequences (147)

AI147142.1 Clone IMAGE:1509736 mixed 3' read P
AI191480.1 Clone IMAGE:1740735 lung 3' read P
CB153128.1 Clone B1T694954-23-B05 brain 5' read P
CB114673.1 Clone L10ChoCK0-1-D01 liver 5' read
CB128332.1 Clone L11SNU354-15-H07 liver 5' read
CB147863.1 Clone L11SNU354s1-17-E12 liver 5' read P
CB147773.1 Clone L9SNU354-14-D08 liver 5' read
CB147987.1 Clone L9SNU354-15-C12 liver 5' read
AI199117.1 Clone IMAGE:1858959 brain 3' read PA
AI337333.1 Clone IMAGE:2062381 intestine 3' read
AI359970.1 Clone IMAGE:2018515 brain 3' read P
AI380990.1 Clone IMAGE:2109320 uncharacterized tissue 3' read A
AI394016.1 Clone IMAGE:2108490 uncharacterized tissue 3' read A
AI424300.1 Clone IMAGE:2093930 prostate 3' read A
AI434866.1 Clone IMAGE:2130348 kidney 3' read P
AI355870.1 Clone IMAGE:1963623 intestine 3' read
AI492226.1 Clone IMAGE:2108629 uncharacterized tissue 3' read A
AI567909.1 Clone IMAGE:2223012 pancreas 3' read
AI569012.1 Clone IMAGE:2214363 lung 3' read
AI569356.1 Clone IMAGE:2186171 stomach 3' read
AI582824.1 Clone IMAGE:2169691 brain 3' read P
AI631409.1 Clone IMAGE:2295241 pancreas 3' read A
AI651800.1 Clone IMAGE:2309593 uncharacterized tissue 3' read
AI700423.1 Clone IMAGE:2327480 intestine 3' read
AI766482.1 Clone IMAGE:2392797 intestine 3' read
AI799778.1 Clone IMAGE:2321374 prostate 3' read P
AI832480.1 Clone IMAGE:2377254 intestine 3' read
Z20694.1 brain
AI910783.1 Clone IMAGE:2392946 intestine 3' read P
AI910846.1 Clone IMAGE:2393333 intestine 3' read
AI937737.1 Clone IMAGE:2468392 brain 3' read P
AI972330.1 Clone IMAGE:2489828 prostate 3' read P
AW008484.1 Clone IMAGE:2533493 stomach 3' read A
AW016198.1 Clone IMAGE:2712280 uncharacterized tissue 3' read A
AW134932.1 Clone IMAGE:2712683 mixed 3' read A
AW136973.1 Clone IMAGE:2715528 mixed 3' read A
AW149688.1 Clone IMAGE:2620595 brain 3' read
AW193135.1 Clone IMAGE:2680098 pancreas 3' read
CF529056.1 Clone UI-1-BC1p-akv-g-11-0-UI placenta 3' read A
AW205438.1 Clone IMAGE:2720807 mixed 3' read PA
AW263863.1 Clone IMAGE:2741949 mouth 3' read A
AW338263.1 Clone IMAGE:2833860 pancreas 3' read A
R65920.1 Clone IMAGE:140454 placenta 5' read
AW779392.1 Clone IMAGE:3034229 kidney 3' read P
CK904593.1 Clone IMAGE:5673579 pancreas 3' read A
CK904594.1 Clone IMAGE:5673579 pancreas 5' read
AW849867.1 intestine
AW853564.1 intestine
CN348810.1 embryonic tissue 5' read
CN348808.1 embryonic tissue 5' read
CN348809.1 embryonic tissue 5' read A
CN348811.1 embryonic tissue 5' read
CN348812.1 embryonic tissue 5' read
CN348813.1 embryonic tissue 5' read
CN348814.1 embryonic tissue 5' read
CN348815.1 embryonic tissue 5' read
CN348816.1 embryonic tissue 5' read
CN348817.1 embryonic tissue 5' read
CN348818.1 embryonic tissue 5' read
CN403634.1 embryonic tissue 5' read P
BE181954.1 pharynx
CR741029.1 Clone IMAGp998H164423_;_IMAGE:1740735 lung 5' read P
BP220867.1 Clone COL05655 intestine 5' read P
BP239452.1 Clone HEP07118 liver 5' read P
CV575200.1 Clone oe33e01 eye 5' read
CX788711.1 Clone IMAGE:7485405 embryonic tissue 5' read P
BE711159.1 pharynx
DR006247.1 Clone TC105635 prostate 5' read P
BE928453.1 intestine
BF002543.1 Clone IMAGE:3315404 intestine 3' read P
BF002697.1 Clone IMAGE:3315890 intestine 3' read A
BF222639.1 Clone IMAGE:3649871 prostate 3' read P
BF348036.1 Clone IMAGE:4158402 brain 5' read
BF353383.1 pharynx P
BF360971.1 ovary
DA125328.1 Clone BRACE3048015 brain 5' read P
DA574368.1 Clone HHDPC2001307 skin 5' read
DA694844.1 Clone NT2NE2015362 5' read P
DA440252.1 Clone CTONG2008777 mouth 5' read P
DA450739.1 Clone CTONG2022963 mouth 5' read P
AW612502.1 Clone IMAGE:2954013 kidney 3' read A
BF058251.1 Clone IMAGE:3475881 ovary 3' read
BF509616.1 Clone IMAGE:3087141 uncharacterized tissue 3' read P
BF511876.1 Clone IMAGE:3088680 uncharacterized tissue 3' read A
BF513564.1 Clone IMAGE:3070237 uncharacterized tissue 3' read PA
BF591031.1 Clone IMAGE:3319161 intestine 3' read P
BF594590.1 Clone IMAGE:3322025 intestine 3' read P
DB226172.1 Clone TRACH3018314 trachea 5' read P
DB323238.1 Clone NT2NE2015362 3' read
BF753818.1 intestine
BF798276.1 intestine
BF800971.1 intestine P
BF801129.1 intestine P
BF801134.1 intestine P
BF801864.1 intestine
BF802625.1 intestine
BF802635.1 intestine
BF809657.1 intestine P
BF810974.1 intestine
BF810975.1 intestine
BF811913.1 intestine
BG248763.1 Clone IMAGE:4546378 intestine 5' read
BG260824.1 Clone IMAGE:4480444 bladder 5' read
BG261243.1 Clone IMAGE:4484253 bladder 5' read
BG285372.1 Clone IMAGE:4539415 prostate 5' read
BG290003.1 Clone IMAGE:4514124 bladder 5' read
BG290655.1 Clone IMAGE:4517985 bladder 5' read
BG681515.1 Clone IMAGE:4752886 skin 5' read
BG682551.1 Clone IMAGE:4749305 skin 5' read
BG682665.1 Clone IMAGE:4753670 skin 5' read A
BG910397.1 Clone IMAGE:4938177 brain 5' read
BG910666.1 Clone IMAGE:4941567 brain 5' read P
BI089714.1 Clone IMAGE:4998894 placenta 5' read
N74885.1 Clone IMAGE:299593 lung 3' read
BG959730.1 intestine
BG977484.1 intestine
W05729.1 Clone IMAGE:299593 lung 5' read A
BM068737.1 Clone IMAGE:5673579 pancreas 5' read
BM742000.1 Clone S7SNU719-7-F08 stomach 5' read
BM769190.1 Clone S14K402-18-B06 stomach 5' read A
BM769706.1 Clone S14K402-22-F05 stomach 5' read
BM769789.1 Clone S14K402-25-G06 stomach 5' read
BM786139.1 Clone S21SNU520-3-A05 stomach 5' read
BM843414.1 Clone S12SNU216-87-A12 lymph node 5' read
BM999573.1 Clone IMAGE:5878527 connective tissue 3' read A
W95477.1 Clone IMAGE:357828 heart 3' read
W95367.1 Clone IMAGE:357828 heart 5' read
BQ320377.1 intestine
BQ437385.1 Clone IMAGE:6157726 skin 5' read
BG059054.1 Clone IMAGE:4254270 pharynx 5' read
BG059345.1 Clone IMAGE:4254954 pharynx 5' read
AA158566.1 Clone IMAGE:591353 pancreas 3' read A
BU565099.1 Clone IMAGE:6603318 mixed 5' read
CA489184.1 Clone IMAGE:6721501 mixed 5' read P
AA348345.1 brain 3' read A
AA348346.1 brain 5' read
AA469071.1 Clone IMAGE:881517 intestine 3' read A
AA503225.1 Clone IMAGE:900295 intestine 3' read
AA488420.1 Clone IMAGE:843045 cervix 3' read A
AA488559.1 Clone IMAGE:843045 cervix 5' read P
AA551754.1 Clone IMAGE:928021 intestine 3' read A
T24482.1 Clone 2C9 intestine
AA627401.1 Clone IMAGE:1147212 intestine 3' read P
AA745423.1 Clone IMAGE:1275721 uncharacterized tissue
AA782573.1 Clone 1361091 parathyroid 3' read A
AA804581.1 Clone IMAGE:1028746 intestine 3' read A
AA933791.1 Clone IMAGE:1552083 uncharacterized tissue 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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