> Cadherin 2, type 1, N-cadherin (neuronal) (CDH2)
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UGID:679988     UniGene Hs.464829     Homo sapiens (human)   CDH2 Order cDNA clone, Links
Cadherin 2, type 1, N-cadherin (neuronal) (CDH2)

Human protein-coding gene CDH2. Represented by 319 ESTs from 131 cDNA libraries. Corresponds to reference sequence NM_001792.3. [UniGene 679988 - Hs.464829]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001783.2 CDH2 gene product H. sapiens 100.0 905
XP_523898.3 PREDICTED: cadherin-2 isoform 2 P. troglodytes 99.9 905
XP_003914309.1 PREDICTED: cadherin-2 P. anubis 99.8 905
XP_002808206.1 PREDICTED: LOW QUALITY PROTEIN: cadherin-2-like M. mulatta 99.7 874
NP_031690.3 Cdh2 gene product M. musculus 98.6 905
NP_001165707.1 neural cadherin-2 precursor X. laevis 89.2 905
NP_571156.2 cdh2 gene product D. rerio 81.9 885
NP_724069.1 Cadherin-N, isoform B D. melanogaster 47.7 172
Other hits (2 of 25) [Show all]SpeciesId(%)Len(aa)
XP_537293.3 PREDICTED: cadherin-2 isoform 2 C. lupus familiaris 99.5 905
XP_002713480.1 PREDICTED: cadherin 2, type 1 O. cuniculus 99.3 901

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; embryonic tissue; thyroid; kidney; bone marrow; vascular; intestine; connective tissue; mixed; heart; adrenal gland; liver; uncharacterized tissue; prostate; ovary; amniotic fluid; eye; skin; pancreas; muscle; bone; lung; thymus; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 18
Map position: 18q11.2
UniSTS entry: Chr 18 D18S1292
UniSTS entry: Chr 18 REN16156
UniSTS entry: Chr 18 REN16155
UniSTS entry: Chr 18 REN16157
UniSTS entry: Chr 18 CDH2
UniSTS entry: Chr 18 REN16158
UniSTS entry: Chr 18 GDB:193186
UniSTS entry: Chr 18 REN16031
UniSTS entry: Chr 18 REN16030
UniSTS entry: Chr 18 REN16029
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BX648579.1 Homo sapiens mRNA; cDNA DKFZp686N1372 (from clone DKFZp686N1372)
AK129728.1 Homo sapiens cDNA FLJ26217 fis, clone ADG08167
NM_001792.3 Homo sapiens cadherin 2, type 1, N-cadherin (neuronal) (CDH2), mRNA PA
M34064.1 Human N-cadherin mRNA, complete cds P
X57548.1 Human mRNA for N-cadherin P
X54315.1 Human mRNA for N-cadherin P
BC036470.1 Homo sapiens cadherin 2, type 1, N-cadherin (neuronal), mRNA (cDNA clone MGC:41765 IMAGE:5264944), complete cds PA
BC021695.1 Homo sapiens cadherin 2, type 1, N-cadherin (neuronal), mRNA (cDNA clone IMAGE:4050571), with apparent retained intron A
AK302831.1 Homo sapiens cDNA FLJ53252 complete cds, highly similar to Cadherin-2 precursor PA
S42303.1 N-cadherin [human, umbilical vein endothelial cells, mRNA, 4132 nt] P

EST sequences (319)

AA954999.1 Clone IMAGE:1577805 mixed 3' read A
AI050761.1 Clone IMAGE:1664006 skin 3' read
AI074445.1 Clone IMAGE:1673688 mixed 3' read P
AI082817.1 Clone IMAGE:1662428 mixed 3' read A
AI127140.1 Clone IMAGE:1708169 heart 3' read
AI143926.1 Clone IMAGE:1737662 testis 3' read A
AI161223.1 Clone IMAGE:1704022 brain 3' read A
BX116373.1 Clone IMAGp998H1374_;_IMAGE:23806 brain A
AI253056.1 Clone IMAGE:2029113 kidney 3' read A
AI264084.1 Clone IMAGE:1855836 mixed 3' read A
CB145698.1 Clone L16HLK3-9-E09 liver 5' read
CB143364.1 Clone L16HLK3-12-B10 liver 5' read P
CB105441.1 Clone L1HLK1-4-H07 liver 5' read
AA693316.1 Clone IMAGE:1157070 kidney 3' read A
T07219.1 Clone HFBEF55 brain
R38385.1 Clone IMAGE:23806 brain 3' read A
AI360818.1 Clone IMAGE:2010646 brain 3' read A
AI361474.1 Clone IMAGE:2014813 brain 3' read A
R58115.1 Clone F9221 heart 5' read
AI752179.1 Clone NHTBC_cn14b08 bone
AI754509.1 Clone HBMSC_cr26c02 bone marrow 3' read A
AI765920.1 Clone IMAGE:2385979 kidney 3' read PA
AL046467.1 Clone DKFZp434A058 testis 5' read P
AL041311.1 Clone DKFZp434N0816 testis 5' read P
AI950214.1 Clone IMAGE:2473559 uncharacterized tissue 3' read P
AW016710.1 Clone IMAGE:2711590 uncharacterized tissue 3' read A
CD557834.1 Clone IMAGE:30390194 testis 5' read P
CD642439.1 Clone IMAGE:30422763 embryonic tissue 5' read P
BX477791.1 Clone DKFZp686M23198 muscle 5' read P
AW136630.1 Clone IMAGE:2715142 mixed 3' read A
AI064969.1 liver P
AI207705.1 liver PA
AW241578.1 Clone IMAGE:2688638 uncharacterized tissue 3' read A
AW296721.1 Clone IMAGE:2730769 uncharacterized tissue 3' read A
AL138111.1 Clone DKFZp547D122 brain 5' read
AW360785.1 intestine
AW360819.1 intestine
AW665220.1 Clone IMAGE:2979360 mixed 3' read
CK724900.1 Clone UI-H-ED1-axp-i-01-0-UI connective tissue 3' read PA
CK725209.1 Clone UI-H-ED1-axp-p-20-0-UI connective tissue 3' read PA
CK823212.1 Clone IMAGE:6135818 pancreas 3' read
AW899304.1 brain
AW900934.1 brain
AW900970.1 brain
AW901558.1 brain
AW901560.1 brain
AW901562.1 brain
AW901572.1 brain
AW901579.1 brain
AW901581.1 brain
AW951188.1 uncharacterized tissue
CN263263.1 embryonic tissue 5' read P
CN263264.1 embryonic tissue 5' read P
CN263265.1 embryonic tissue 5' read P
CN263266.1 embryonic tissue 5' read
CN263267.1 embryonic tissue 5' read P
CN263268.1 embryonic tissue 5' read P
CN263269.1 embryonic tissue 5' read P
CN263278.1 embryonic tissue 5' read P
CN263279.1 embryonic tissue 5' read
CN263280.1 embryonic tissue 5' read P
CN263281.1 embryonic tissue 5' read P
CN263282.1 embryonic tissue 5' read P
CN263283.1 embryonic tissue 5' read P
CN263276.1 embryonic tissue 5' read P
CN263270.1 embryonic tissue 5' read P
CN263271.1 embryonic tissue 5' read P
CN263272.1 embryonic tissue 5' read P
CN263273.1 embryonic tissue 5' read P
CN263274.1 embryonic tissue 5' read P
CN263275.1 embryonic tissue 5' read P
CN263277.1 embryonic tissue 5' read P
CN263261.1 embryonic tissue 5' read P
CN263260.1 embryonic tissue 5' read P
CN263262.1 embryonic tissue 5' read P
BE176222.1 thyroid
BE178650.1 thyroid
BE208308.1 Clone IMAGE:2958128 kidney 3' read
BP194860.1 Clone ADB06322 brain 5' read P
BP197669.1 Clone ADG06567 adrenal gland 5' read P
BP204557.1 Clone CAS02804 vascular 5' read
BP204626.1 Clone CAS02955 vascular 5' read
BP205113.1 Clone CAS04291 vascular 5' read P
BP205487.1 Clone CAS05128 vascular 5' read P
BP206331.1 Clone CAS07930 vascular 5' read
BP207523.1 Clone CAS11154 vascular 5' read P
BP202951.1 Clone CAE01139 vascular 5' read P
BP229301.1 Clone FBR02718 brain 5' read P
BP229660.1 Clone FBR04015 brain 5' read P
BP230492.1 Clone FBR07242 brain 5' read P
BP240124.1 Clone HEP10249 liver 5' read P
BP245981.1 Clone HKR04671 kidney 5' read P
BP247072.1 Clone HKR07581 kidney 5' read P
BP248365.1 Clone HKR10842 kidney 5' read P
BP233954.1 Clone HCR01715 vascular 5' read P
BP366113.1 Clone TIR09176 lung 5' read P
BP332532.1 Clone RPR09085 kidney 5' read P
BP257628.1 Clone HRT01429 heart 5' read P
BP258703.1 Clone HRT04315 heart 5' read P
BP258738.1 Clone HRT04447 heart 5' read P
BP267800.1 Clone JTH08029 thyroid 5' read P
BP275076.1 Clone KDN02757 kidney 5' read P
BE464612.1 Clone IMAGE:3144024 kidney 3' read
CV806774.1 Clone IMAGE:7501497 embryonic tissue 5' read P
CV808279.1 Clone IMAGE:7501982 embryonic tissue 5' read P
CX164349.1 Clone IMAGE:7467811 embryonic tissue 5' read
CX165665.1 Clone IMAGE:7469201 embryonic tissue 5' read P
BE701904.1 brain
BE701906.1 brain
CX871059.1 Clone IMAGE:7475874 embryonic tissue 5' read P
CX872344.1 Clone IMAGE:7487105 embryonic tissue 5' read P
BE771084.1 prostate
BE812771.1 amniotic fluid
AV694302.1 Clone GKCDCG10 liver 5' read P
DN999979.1 Clone TC119018 vascular 5' read P
BE858839.1 Clone IMAGE:3308793 brain 3' read A
BE932031.1 thyroid P
BE938964.1 testis
BE938981.1 testis
BE939055.1 testis
BE958106.1 Clone IMAGE:3929916 brain 5' read
BE968742.1 Clone IMAGE:3933627 heart 5' read
AV705261.1 Clone ADBANE02 adrenal gland 5' read P
BF037049.1 Clone IMAGE:3860549 ovary 5' read
DR155478.1 Clone IMAGE:7963966 embryonic tissue 5' read P
DR158946.1 Clone IMAGE:7967780 embryonic tissue 5' read P
DR159474.1 Clone IMAGE:7968718 embryonic tissue 5' read P
BF081566.1 amniotic fluid P
D54330.1 Clone GEN-136A11 brain 5' read
DR760592.1 Clone IMAGE:7969902 embryonic tissue 5' read P
DR762349.1 Clone IMAGE:7971955 embryonic tissue 5' read P
DR762405.1 Clone IMAGE:7971850 embryonic tissue 5' read
AU120201.1 Clone HEMBB1000188 mixed 5' read P
AU127328.1 Clone NT2RP2001048 testis 5' read
AU132015.1 Clone NT2RP3003636 testis 5' read P
BY798213.2 Clone HE3272.seq eye 5' read
T29223.1 ovary 5' read
BF215604.1 Clone IMAGE:4093668 brain 5' read
BF247160.1 Clone IMAGE:4068414 kidney 5' read
BF363888.1 brain
BF666951.1 Clone IMAGE:4278695 brain 5' read
BF668544.1 Clone IMAGE:4280541 brain 5' read
DA012659.1 Clone ADRGL2004989 adrenal gland 5' read P
DA320432.1 Clone BRHIP3013154 brain 5' read P
DA119077.1 Clone BRACE3039327 brain 5' read P
DA238617.1 Clone BRAWH3035802 brain 5' read P
DA245822.1 Clone BRAWH3044597 brain 5' read P
DA101020.1 Clone BRACE3013038 brain 5' read P
DA330101.1 Clone BRHIP3027226 brain 5' read P
BF691307.1 Clone IMAGE:4332635 skin 5' read
DA247816.1 Clone BRAWH3047094 brain 5' read P
DA031778.1 Clone ASTRO2016298 brain 5' read P
DA326233.1 Clone BRHIP3021591 brain 5' read
DA249373.1 Clone BRAWH3049051 brain 5' read P
DA105768.1 Clone BRACE3019804 brain 5' read P
BF700368.1 Clone IMAGE:4287456 brain 5' read P
DA335210.1 Clone BRHIP3035025 brain 5' read P
DA185555.1 Clone BRAMY3004881 brain 5' read P
DA029689.1 Clone ASTRO2013705 brain 5' read P
DA029926.1 Clone ASTRO2013989 brain 5' read P
DA186510.1 Clone BRAMY3006393 brain 5' read P
DA225616.1 Clone BRAWH3019050 brain 5' read P
DA193236.1 Clone BRAMY3017053 brain 5' read P
DA226298.1 Clone BRAWH3019987 brain 5' read P
DA497192.1 Clone FCBBF3010216 brain 5' read P
DA543322.1 Clone HCASM2000686 vascular 5' read P
DA616439.1 Clone IMR322015880 brain 5' read P
DA394895.1 Clone BRTHA2034027 brain 5' read P
DA545719.1 Clone HCASM2003515 vascular 5' read P
DA356026.1 Clone BRSTN2001038 brain 5' read P
DA508377.1 Clone FCBBF3024634 brain 5' read P
DA549914.1 Clone HCASM2008517 vascular 5' read P
DA411524.1 Clone BRTHA3018743 brain 5' read P
DA406214.1 Clone BRTHA3011387 brain 5' read P
DA597654.1 Clone HSYRA2002087 connective tissue 5' read P
DA382892.1 Clone BRTHA2016983 brain 5' read P
DA409731.1 Clone BRTHA3016184 brain 5' read P
AU149944.1 Clone NT2RP2001048 testis 3' read
DA725067.1 Clone NT2RI3006636 testis 5' read P
DA803938.1 Clone OCBBF3008885 brain 5' read P
AU153641.2 Clone NT2RP3003636 testis 3' read
DA810636.1 Clone OCBBF3027295 brain 5' read P
DA759258.1 Clone NT2RP8007560 testis 5' read P
DA804968.1 Clone OCBBF3019840 brain 5' read P
DA759654.1 Clone NT2RP8008116 testis 5' read P
DA759822.1 Clone NT2RP8008397 testis 5' read P
DA811068.1 Clone OCBBF3027885 brain 5' read P
DA799435.1 Clone OCBBF3003067 brain 5' read P
DA811518.1 Clone OCBBF3028481 brain 5' read P
DA805404.1 Clone OCBBF3020424 brain 5' read P
DB038656.1 Clone TESTI2024981 testis 5' read P
DA808505.1 Clone OCBBF3024454 brain 5' read P
DA809117.1 Clone OCBBF3025235 brain 5' read P
DA809858.1 Clone OCBBF3026218 brain 5' read P
BF529885.1 Clone IMAGE:4180043 brain 5' read P
DA760668.1 Clone NTISM1000070 testis 5' read P
DA709538.1 Clone NT2RI2014818 5' read P
DA800116.1 Clone OCBBF3003983 brain 5' read P
DA800828.1 Clone OCBBF3004891 brain 5' read P
DA789024.1 Clone OCBBF2027133 brain 5' read P
DA801357.1 Clone OCBBF3005548 brain 5' read P
DA801472.1 Clone OCBBF3005688 brain 5' read P
DA801753.1 Clone OCBBF3006034 brain 5' read P
DA801914.1 Clone OCBBF3006225 brain 5' read P
DA723572.1 Clone NT2RI3004719 testis 5' read P
DA723805.1 Clone NT2RI3005010 testis 5' read P
DA723959.1 Clone NT2RI3005213 testis 5' read P
DA757963.1 Clone NT2RP8005523 testis 5' read P
DB068537.1 Clone TESTI4010483 testis 5' read P
DB078757.1 Clone TESTI4023694 testis 5' read P
DB085712.1 Clone TESTI4033087 testis 5' read P
DB079197.1 Clone TESTI4024278 testis 5' read P
DB086017.1 Clone TESTI4033466 testis 5' read P
DB092921.1 Clone TESTI4042703 testis 5' read P
DB094167.1 Clone TESTI4044397 testis 5' read P
DB100165.1 Clone TESTI4052013 testis 5' read P
DB095438.1 Clone TESTI4046080 testis 5' read P
DB089484.1 Clone TESTI4038084 testis 5' read P
DB358857.1 Clone HEMBB1000188 mixed 3' read
DB064777.1 Clone TESTI4005654 testis 5' read P
DB327379.1 Clone OCBBF3027467 brain 3' read A
DB066389.1 Clone TESTI4007709 testis 5' read P
DB066914.1 Clone TESTI4008384 testis 5' read P
DB151803.1 Clone THYMU3028827 thymus 5' read P
BG105211.1 Clone IMAGE:4422495 adrenal gland 5' read P
BF970386.1 Clone IMAGE:4361376 adrenal gland 5' read P
BF959805.1 brain P
BF885816.1 testis
DB483676.1 Clone H023098F01 brain 5' read P
DB468925.1 Clone H023035H21 brain 5' read P
DB470328.1 Clone H023044D13 brain 5' read
DB538436.1 Clone H023044D13 brain 3' read
DB472306.1 Clone H023055C05 brain 5' read P
DB525197.1 Clone H013087E16 testis 3' read
DB541059.1 Clone H023055C05 brain 3' read A
DB459756.1 Clone H013087E16 testis 5' read P
BG498896.1 Clone IMAGE:4666818 prostate 5' read
BG193800.1 connective tissue A
BG197310.1 connective tissue
BG198866.1 connective tissue
BG203502.1 connective tissue
BG208219.1 connective tissue
BG209807.1 connective tissue
BG220385.1 connective tissue A
BG221226.1 connective tissue
BG779350.1 Clone IMAGE:4805848 prostate 5' read
BG749763.1 Clone IMAGE:4843665 eye 5' read P
EL733845.1 mixed 5' read P
N83358.1 Clone EC0330 heart 5' read
BG720203.1 Clone IMAGE:4824564 testis 5' read P
BJ992352.1 Clone hkmt-2946 liver 5' read P
BJ992592.1 Clone hkmt-3298 liver 5' read P
BG723559.1 Clone IMAGE:4826584 testis 5' read P
ES312022.1 skin 5' read
AL600417.1 Clone DKFZp313I2233 uncharacterized tissue 5' read P
BI458990.1 Clone IMAGE:5265603 testis 5' read P
BI460696.1 Clone IMAGE:5266983 testis 5' read P
BI461974.1 Clone IMAGE:5269853 testis 5' read P
DC404210.1 Clone TESTI4049022 testis 5' read P
N89144.1 Clone K8081 heart 5' read
DC396463.1 Clone TESTI2018812 testis 5' read P
DC396819.1 Clone TESTI2022475 testis 5' read P
DC402889.1 Clone TESTI4033563 testis 5' read P
DC403182.1 Clone TESTI4037239 testis 5' read P
DC403359.1 Clone TESTI4039087 testis 5' read P
BI547033.1 Clone IMAGE:5261797 brain 5' read P
BI549642.1 Clone IMAGE:5264944 brain 5' read P
W24640.1 Clone IMAGE:308319 lung 5' read
BM670881.1 Clone UI-E-DW1-ahe-a-14-0-UI eye 3' read A
BM692023.1 Clone UI-E-CL1-aeu-a-07-0-UI eye 5' read
BM693820.1 Clone UI-E-DW1-ahe-a-14-0-UI eye 5' read P
W48793.1 Clone IMAGE:325182 skin 5' read P
W49619.1 Clone IMAGE:325182 skin 3' read
BM893528.1 Clone IMAGE:6135818 pancreas 3' read
BM966740.1 Clone IMAGE:6135818 pancreas 5' read P
AL710745.1 Clone DKFZp686O1072 muscle 5' read
BM999382.1 Clone IMAGE:5878626 connective tissue 3' read A
BQ009810.1 Clone IMAGE:5835276 connective tissue 3' read A
BQ277651.1 Clone IMAGE:5804495 ovary 5' read P
BQ435753.1 Clone IMAGE:6102509 testis 5' read P
BQ638619.1 Clone hd25f05 eye 5' read P
BQ772138.1 Clone UI-H-EZ1-bbl-o-09-0-UI bone 3' read A
BG114649.1 Clone IMAGE:4415866 intestine 5' read P
BU145526.1 Clone IMAGE:6186557 ganglia 5' read P
AA069613.1 Clone IMAGE:529253 skin 3' read
AA090678.1 heart 5' read
C04763.1 Clone 3NHC3952 heart
BU852527.1 Clone IMAGE:6618916 testis 5' read P
BU940410.1 Clone IMAGE:6709988 mixed 5' read
HY007611.1 Clone H04D026B06 testis P
HY020318.1 Clone H04D068M11 testis P
HY026385.1 Clone H04D090C01 testis
HY028730.1 Clone H04D099A07 testis P
HY036974.1 Clone H04D128A01 testis P
HY041045.1 Clone H04D144E01 testis P
HY046037.1 Clone H04D161B11 testis P
HY050959.1 Clone H04D180D01 testis P
HY191512.1 Clone H04D026B06 testis
HY210257.1 Clone H04D090C01 testis
HY212769.1 Clone H04D098C13 testis
HY213055.1 Clone H04D099A07 testis
HY213159.1 Clone H04D099F14 testis
HY222261.1 Clone H04D128A01 testis
HY224309.1 Clone H04D134M04 testis
HY227484.1 Clone H04D144E01 testis
HY232368.1 Clone H04D161B11 testis
HY238044.1 Clone H04D179G08 testis
HY238311.1 Clone H04D180D01 testis
HY241983.1 Clone H04D191G21 testis
CA337305.1 Clone IMAGE:5608866 embryonic tissue 5' read
T77501.1 Clone IMAGE:23806 brain 5' read P
AA406401.1 Clone IMAGE:753401 mixed 5' read
AA410423.1 Clone IMAGE:753401 mixed 3' read
AA653561.1 Clone IMAGE:1127999 kidney 3' read
AA661623.1 Clone IMAGE:1218963 prostate 3' read A
AA747483.1 Clone IMAGE:1267875 bone
AA757163.1 Clone 1309603 testis 3' read A
AA933061.1 Clone IMAGE:1572059 kidney 3' read
AA863199.1 Clone IMAGE:1455703 kidney 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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