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UGID:674801     UniGene Hs.459642     Homo sapiens (human)   CACNA1H
Calcium channel, voltage-dependent, T type, alpha 1H subunit (CACNA1H)

Human protein-coding gene CACNA1H. Represented by 109 ESTs from 60 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 674801 - Hs.459642]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_066921.2 CACNA1H gene product H. sapiens 100.0 2352
NP_067390.4 Cacna1h gene product M. musculus 89.5 2358
XP_003198197.1 PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1H-like D. rerio 70.9 2257
NP_001245544.1 Ca[2+]-channel protein alpha[[1]] subunit T, isoform D D. melanogaster 66.4 2538
NP_741848.1 Protein CCA-1, isoform a C. elegans 62.4 1630
Other hits (2 of 34) [Show all]SpeciesId(%)Len(aa)
XP_003916362.1 PREDICTED: voltage-dependent T-type calcium channel subunit alpha-1H isoform 1 P. anubis 97.4 2351
XP_001172468.2 PREDICTED: LOW QUALITY PROTEIN: voltage-dependent T-type calcium channel subunit alpha-1H, partial P. troglodytes 91.3 1878

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; testis; intestine; uterus; pancreas; brain; kidney; prostate; ovary; mixed; embryonic tissue; eye; thyroid; bone; mammary gland; mouth; parathyroid; skin; cervix; lung
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p13.3
UniSTS entry: Chr 16 CACNA1H_1248
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AF070604.1 Homo sapiens clone 24597 mRNA sequence PA
AF051946.3 Homo sapiens T-type calcium channel alpha 1H subunit (CACNA1H) mRNA, complete cds P
AF073931.1 Homo sapiens low-voltage activated calcium channel alpha 1H mRNA, complete cds P
NM_001005407.1 Homo sapiens calcium channel, voltage-dependent, T type, alpha 1H subunit (CACNA1H), transcript variant 2, mRNA PA
NM_021098.2 Homo sapiens calcium channel, voltage-dependent, T type, alpha 1H subunit (CACNA1H), transcript variant 1, mRNA PA
DQ363529.1 Homo sapiens low-voltage-activated calcium channel alpha1H subunit splice variant 577 (CACNA1H) mRNA, partial cds, alternatively spliced P
DQ363528.1 Homo sapiens low-voltage-activated calcium channel alpha1H subunit splice variant 544 (CACNA1H) mRNA, partial cds, alternatively spliced P
DQ363527.1 Homo sapiens low-voltage-activated calcium channel alpha1H subunit splice variant 513 (CACNA1H) mRNA, partial cds, alternatively spliced P
DQ363526.1 Homo sapiens low-voltage-activated calcium channel alpha1H subunit splice variant 512 (CACNA1H) mRNA, partial cds, alternatively spliced P
AJ420779.1 Homo sapiens mRNA for calcium channel, voltage-dependent, T type, alpha 1Hb subunit (CACNA1HB gene) P
AK074965.1 Homo sapiens cDNA FLJ90484 fis, clone NT2RP3003000, highly similar to Voltage-dependent T-type calcium channel subunit alpha-1H P

EST sequences (109)

CB052647.1 Clone IMAGE:3290490 uncharacterized tissue 5' read
CB069180.1 Clone IMAGE:6364681 pancreas 3' read A
AI167745.1 Clone IMAGE:1682911 parathyroid 3' read P
BX105232.1 Clone IMAGp998C131069_;_IMAGE:452676 mixed
AI184928.1 Clone IMAGE:1509122 mixed 3' read A
AI201132.1 Clone IMAGE:1754825 testis 3' read A
AI659878.1 Clone IMAGE:2249755 prostate 3' read A
AI804686.1 Clone IMAGE:2249214 prostate 3' read A
AL047084.1 Clone DKFZp586A2218 uterus 5' read P
AI862107.1 Clone IMAGE:2237769 uncharacterized tissue 3' read
CB857794.1 Clone IMAGE:5794606 mouth 5' read
AI874207.1 Clone IMAGE:2439362 uterus 3' read A
CD243650.1 Clone IMAGE:30383454 testis 5' read P
CD580445.2 Clone MPMGp800E07556 brain 5' read P
AW025684.1 Clone IMAGE:2516250 uncharacterized tissue 3' read A
AW169135.1 Clone IMAGE:2657656 uterus 3' read A
AW188832.1 Clone IMAGE:2673858 uterus 3' read A
AW205633.1 Clone IMAGE:2722675 mixed 3' read P
AW439335.1 Clone IMAGE:2779448 uterus 3' read A
AW473156.1 Clone IMAGE:2853171 uterus 3' read A
CD630638.1 uncharacterized tissue P
CD630639.1 uncharacterized tissue P
CD630640.1 uncharacterized tissue P
CD630641.1 uncharacterized tissue P
CD630642.1 uncharacterized tissue P
CD630643.1 uncharacterized tissue
CD630632.1 uncharacterized tissue
CD630633.1 uncharacterized tissue
CD630634.1 uncharacterized tissue P
CD630635.1 uncharacterized tissue P
CD630636.1 uncharacterized tissue P
CD630637.1 uncharacterized tissue P
AW517011.1 Clone IMAGE:2747636 cervix 3' read A
AW772175.1 Clone IMAGE:3033142 kidney 3' read A
CK818384.1 Clone IMAGE: pancreas 3' read
CK818385.1 Clone IMAGE: pancreas 5' read A
CK824812.1 Clone IMAGE:5593416 pancreas 3' read P
CK824813.1 Clone IMAGE:5593416 pancreas 5' read P
AW845336.1 intestine
AW881528.1 ovary
AW881532.1 ovary
CN432034.1 embryonic tissue 5' read P
CN432035.1 embryonic tissue 5' read P
CN432036.1 embryonic tissue 5' read P
CN432032.1 embryonic tissue 5' read P
CN432033.1 embryonic tissue 5' read P
BE254486.1 Clone IMAGE:3352220 eye 5' read P
BP217829.1 Clone CNR02048 brain 5' read P
CV364481.1 thyroid P
BP387437.1 Clone hbt07340 pancreas 3' read A
BE835049.1 prostate
BE838462.1 prostate
BE838464.1 prostate
BE838473.1 prostate
BF001888.1 Clone IMAGE:3314183 intestine 3' read A
CR996709.1 Clone RZPDp9017E2141 uncharacterized tissue 5' read P
BF195077.1 Clone IMAGE:3643927 ovary 3' read A
AA715069.1 Clone IMAGE:1233276 bone
DA196160.1 Clone BRAMY4001766 brain 5' read P
DA192830.1 Clone BRAMY3016445 brain 5' read
DA258574.1 Clone BRCAN2010135 brain 5' read P
DA496301.1 Clone FCBBF3009102 brain 5' read P
DA380514.1 Clone BRTHA2013737 brain 5' read P
DA494045.1 Clone FCBBF3006200 brain 5' read P
DA572839.1 Clone HEMBB1001970 mixed 5' read P
DB001722.1 Clone TBAES2003719 mammary gland 5' read P
DA877355.1 Clone PROST2015788 prostate 5' read P
DA799687.1 Clone OCBBF3003412 brain 5' read P
DA735181.1 Clone NT2RP3000282 testis 5' read P
DA736256.1 Clone NT2RP3003000 testis 5' read P
DA904906.1 Clone SKNMC2005378 brain 5' read P
BF513282.1 Clone IMAGE:3070572 uncharacterized tissue 3' read P
DB368696.1 Clone NT2RP3003000 testis 3' read A
DB075734.1 Clone TESTI4019703 testis 5' read P
DB069343.1 Clone TESTI4011557 testis 5' read P
DB282008.1 Clone UTERU3009127 uterus 5' read P
DB061484.1 Clone TESTI4001355 testis 5' read
DB100395.1 Clone TESTI4052298 testis 5' read P
DB290610.1 Clone UTERU3020688 uterus 5' read
DB284593.1 Clone UTERU3012574 uterus 5' read
DB285728.1 Clone UTERU3014066 uterus 5' read P
DB359941.1 Clone HEMBB1001970 mixed 3' read A
DB367384.1 Clone NT2RP3000282 testis 3' read A
BG109912.1 Clone IMAGE:4367372 bone 5' read
BI046626.1 prostate
BI438774.1 pancreas 3' read A
BI439093.1 pancreas 5' read
BI964022.1 Clone IMAGE:5671912 pancreas 5' read P
CU444253.1 skin
CU445583.1 skin
BM127741.1 Clone IMAGE:5675894 pancreas 3' read A
BM127990.1 Clone IMAGE:5675894 pancreas 5' read
BM264453.1 pancreas 3' read P
BM271813.1 pancreas 5' read P
BM474375.1 Clone IMAGE:5582459 eye 5' read P
BM545119.1 Clone IMAGE:5588926 ovary 5' read P
BM554380.1 Clone IMAGE:5742497 brain 5' read P
BM665187.1 Clone UI-E-CL1-afg-o-09-0-UI eye 3' read A
BM715411.1 Clone UI-E-CL1-afg-o-09-0-UI eye 5' read A
BM980747.1 Clone UI-CF-EN1-ade-c-05-0-UI lung 3' read A
BQ372643.1 prostate P
BU857411.1 Clone IMAGE:6647248 mammary gland 5' read P
BU860434.1 Clone IMAGE:6651532 mammary gland 5' read P
BU860553.1 Clone IMAGE:6651666 mammary gland 5' read P
CA335096.1 Clone IMAGE:5605917 mouth 5' read
T80376.1 Clone IMAGE:24597 brain 5' read
AA776500.1 Clone IMAGE:1156363 kidney 3' read A
AA779225.1 Clone IMAGE:452676 mixed 3' read A
AA788598.1 Clone IMAGE:1127202 kidney 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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