> Intraflagellar transport 52 homolog (Chlamydomonas) (IFT52)
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UGID:239369     UniGene Hs.444332     Homo sapiens (human)   IFT52 Order cDNA clone, Links
Intraflagellar transport 52 homolog (Chlamydomonas) (IFT52)

Human protein-coding gene IFT52. Represented by 232 ESTs from 130 cDNA libraries. Corresponds to reference sequence NM_016004.2. [UniGene 239369 - Hs.444332]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001149852.1 PREDICTED: intraflagellar transport protein 52 homolog isoform 4 P. troglodytes 100.0 436
NP_057088.2 IFT52 gene product H. sapiens 100.0 436
XP_001085430.1 PREDICTED: intraflagellar transport protein 52 homolog isoform 2 M. mulatta 99.8 436
XP_003904773.1 PREDICTED: intraflagellar transport protein 52 homolog isoform 1 P. anubis 99.8 436
NP_742162.2 Ift52 gene product M. musculus 94.8 424
NP_001087599.1 intraflagellar transport 52 homolog X. laevis 82.9 439
NP_001001834.2 ift52 gene product D. rerio 82.9 432
XP_001692161.1 intraflagellar transport protein IFT52 C. reinhardtii 54.7 415
Other hits (2 of 36) [Show all]SpeciesId(%)Len(aa)
XP_853492.2 PREDICTED: intraflagellar transport protein 52 homolog C. lupus familiaris 96.2 444
XP_002721108.1 PREDICTED: intraflagellar transport 52 homolog O. cuniculus 96.1 436

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; testis; intestine; lung; pancreas; mammary gland; stomach; blood; mixed; eye; placenta; kidney; embryonic tissue; uterus; adipose tissue; muscle; bone; esophagus; spleen; salivary gland; cervix; heart; connective tissue; adrenal gland; nerve; ganglia; lymph node; ovary; liver; thyroid; vascular; skin; parathyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
UniSTS entry: Chr 20 SHGC-36858 [Map Viewer]
UniSTS entry: Chr 20 AL031488
UniSTS entry: Chr 1 D11S2560
UniSTS entry: Chr 1 GDB:314481
UniSTS entry: Chr 1 RH80030
UniSTS entry: Chr 1 D11S2921
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK001436.1 Homo sapiens cDNA FLJ10574 fis, clone NT2RP2003265, highly similar to Intraflagellar transport 52 homolog P
NM_016004.2 Homo sapiens intraflagellar transport 52 homolog (Chlamydomonas) (IFT52), mRNA P
AF151811.1 Homo sapiens CGI-53 protein mRNA, complete cds P
AK097603.1 Homo sapiens cDNA FLJ40284 fis, clone TESTI2027791
AK301915.1 Homo sapiens cDNA FLJ50276 complete cds, moderately similar to Intraflagellar transport 52 homolog P
BC039831.1 Homo sapiens intraflagellar transport 52 homolog (Chlamydomonas), mRNA (cDNA clone MGC:48784 IMAGE:6095634), complete cds PA

EST sequences (232)

AA973550.1 Clone IMAGE:1569242 lung 3' read A
AI005395.1 Clone IMAGE:1624899 embryonic tissue 3' read A
AI040449.1 Clone IMAGE:1646983 parathyroid 3' read PA
AI051321.1 Clone IMAGE:1647481 parathyroid 3' read PA
AI076754.1 Clone IMAGE:1676403 embryonic tissue 3' read A
AI079206.1 Clone IMAGE:1669870 brain 3' read A
AA902496.1 Clone IMAGE:1521379 lung 3' read A
CB047017.1 Clone IMAGE:3252833 kidney 3' read A
CB047018.1 Clone IMAGE:3252833 kidney 5' read A
AI086973.1 Clone IMAGE:1680141 skin 3' read A
CB157858.1 Clone L18POOL1n1-5-A10 liver 5' read P
CB118419.1 Clone L3SNU475s1-19-A08 liver 5' read P
AI204604.1 Clone IMAGE:1734914 testis 3' read A
R35520.1 Clone IMAGE:37292 brain 5' read P
AI312921.1 Clone IMAGE:1930220 lung 3' read A
AI363297.1 Clone IMAGE:2016094 brain 3' read A
AI419623.1 Clone IMAGE:2106108 brain 3' read A
AI354431.1 Clone IMAGE:1965044 ovary 3' read P
R51088.1 Clone IMAGE:37292 brain 3' read A
AI579904.1 Clone IMAGE:2153760 intestine 3' read
AI582330.1 Clone IMAGE:2213828 lung 3' read PA
AI651157.1 Clone IMAGE:2304163 uncharacterized tissue 3' read P
AI697773.1 Clone IMAGE:2341341 lung 3' read A
AI701757.1 Clone IMAGE:2340534 lung 3' read A
AI767182.1 Clone IMAGE:2400942 kidney 3' read
BX280296.1 Clone IMAGp998H2110420_;_IMAGE:4521284 uncharacterized tissue P
AI819589.1 Clone IMAGE:2411228 lymph node 3' read P
BX342486.2 Clone CS0DL002YG07 uncharacterized tissue 3' read P
BX346386.2 Clone CS0DL009YG20 uncharacterized tissue 3' read P
BX346387.2 Clone CS0DL009YG20 uncharacterized tissue 5' read P
BX374241.2 Clone CS0DL002YG07 uncharacterized tissue 3' read PA
BX372243.2 Clone CS0DL002YG07 uncharacterized tissue 3' read P
BX394406.2 Clone CS0DC015YG07 uncharacterized tissue 3' read P
BX394407.2 Clone CS0DC015YG07 uncharacterized tissue 5' read P
BX375895.2 Clone CS0DC019YC24 uncharacterized tissue 3' read P
BX375896.2 Clone CS0DC019YC24 uncharacterized tissue 5' read P
BX337434.2 Clone CS0DI041YL05 placenta 5' read P
BX340027.2 Clone CS0DI080YL02 placenta 3' read P
BX397719.2 Clone CS0DI041YL05 placenta 3' read P
BX341371.2 Clone CS0DJ015YG12 blood 3' read P
BX341372.2 Clone CS0DJ015YG12 blood 5' read P
BX341390.2 Clone CS0DJ015YJ05 blood 3' read P
BX341391.2 Clone CS0DJ015YJ05 blood 5' read P
BX400346.2 Clone CS0DJ008YD03 blood 5' read P
BX393092.2 Clone CS0DJ008YL11 blood 3' read PA
BX418180.2 Clone CS0DF001YB11 brain 5' read P
BX418181.2 Clone CS0DF001YB11 brain 5' read P
AI949632.1 Clone IMAGE:2471128 kidney 3' read PA
BX418179.2 Clone CS0DF001YB11 brain 3' read P
BX414269.2 Clone CS0DH006YO03 blood 3' read A
BX436008.2 Clone CS0DH003YM14 blood 3' read A
BX443451.2 Clone CS0DH003YM14 blood 3' read P
BX443452.2 Clone CS0DH003YM14 blood 5' read P
BX436064.2 Clone CS0DH005YP11 blood 3' read
BX421898.2 Clone CS0DH005YP11 blood 5' read P
CB852397.1 Clone UI-CF-FN0-afb-f-05-0-UI lung 3' read PA
BX462686.2 Clone CS0DH006YO03 blood 5' read P
AI989896.1 Clone IMAGE:2497626 uncharacterized tissue 3' read PA
AW050442.1 Clone IMAGE:2557795 uterus 3' read A
AW075301.1 Clone IMAGE:2574260 intestine 3' read A
AW138858.1 Clone IMAGE:2720148 mixed 3' read PA
AW386234.1 uncharacterized tissue P
AW393458.1 stomach P
AW580833.1 uncharacterized tissue
CK824016.1 Clone IMAGE:5635075 pancreas 5' read P
AW875468.1 uncharacterized tissue
AW875787.1 uncharacterized tissue P
CN481737.1 Clone hw11e07 eye 5' read P
CN363099.1 embryonic tissue 5' read P
CN363100.1 embryonic tissue 5' read P
CN363101.1 embryonic tissue 5' read A
CN363102.1 embryonic tissue 5' read P
AW967081.1 uncharacterized tissue P
AW998137.1 mammary gland
AW998140.1 mammary gland
BE090231.1 mammary gland
BE090240.1 mammary gland P
BP193140.1 Clone ADB01418 brain 5' read P
BP205062.1 Clone CAS04171 vascular 5' read P
BP230580.1 Clone FBR07556 brain 5' read P
BP244938.1 Clone HKR01938 kidney 5' read P
BP213772.1 Clone CBR08560 brain 5' read P
BP370525.1 Clone TST05974 testis 5' read P
BP370719.1 Clone TST06822 testis 5' read P
BP268683.1 Clone JTH10914 thyroid 5' read P
BP271455.1 Clone KAR09586 intestine 5' read P
BP307210.1 Clone NRB00327 brain 5' read P
BP308102.1 Clone NRB03874 brain 5' read P
BP308189.1 Clone NRB04205 brain 5' read P
BP376876.1 Clone WMC05565 uterus 5' read P
BP381804.1 Clone adSE00403 adipose tissue 5' read P
BE296968.1 Clone IMAGE:3531621 muscle 5' read
BE392907.1 Clone IMAGE:3626963 uterus 5' read
BE465425.1 Clone IMAGE:3183435 kidney 3' read A
BE696080.1 intestine P
CX754564.1 Clone IMAGE:7779392 embryonic tissue 3' read P
BE788978.1 Clone IMAGE:3883720 lung 5' read P
R89165.1 Clone IMAGE:195721 mixed 5' read P
BE876807.1 Clone IMAGE:3890685 lung 5' read
BE879148.1 Clone IMAGE:3892124 lung 5' read P
DN994863.1 Clone TC114489 brain 5' read P
AV703478.1 Clone ADBABE04 adrenal gland 5' read P
AU128348.2 Clone NT2RP2003265 testis 5' read P
BF447700.1 Clone IMAGE:3706009 lung 3' read
BF667854.1 Clone IMAGE:4279915 brain 5' read P
DA038049.1 Clone BGGI12000493 uncharacterized tissue 5' read P
DA201004.1 Clone BRAWH2005392 brain 5' read P
DA203898.1 Clone BRAWH2009797 brain 5' read P
DA061464.1 Clone BRACE2010006 brain 5' read P
BF696809.1 Clone IMAGE:4282354 brain 5' read
DA607800.1 Clone IMR322005084 brain 5' read P
DA430992.1 Clone COLON2007398 intestine 5' read P
DA583053.1 Clone HLUNG2002547 lung 5' read P
DA365646.1 Clone BRSTN2013303 brain 5' read P
DA517598.1 Clone FEBRA2006431 brain 5' read P
AW608779.1 uncharacterized tissue P
DB040552.1 Clone TESTI2027392 testis 5' read P
AU150645.1 Clone NT2RP2003265 testis 3' read A
DA962017.1 Clone SPLEN2042957 spleen 5' read P
DB037055.1 Clone TESTI2022959 testis 5' read P
DB037837.1 Clone TESTI2023934 testis 5' read P
DB038722.1 Clone TESTI2025067 testis 5' read P
DA704942.1 Clone NT2RI2008393 5' read P
DA705435.1 Clone NT2RI2009029 5' read P
DB015661.1 Clone TESOP2004780 esophagus 5' read P
BF541236.1 Clone IMAGE:4067616 kidney 5' read
DA903011.1 Clone SKNMC2003049 brain 5' read P
DB023037.1 Clone TESTI2004138 testis 5' read P
DB030779.1 Clone TESTI2014513 testis 5' read P
DA715495.1 Clone NT2RI2022798 5' read P
DB027576.1 Clone TESTI2010150 testis 5' read P
DB192032.1 Clone TOVAR2000055 ovary 5' read P
BF732231.1 Clone IMAGE:3434151 ovary 3' read A
DB337830.1 Clone TESTI2027791 testis 3' read
DB193978.1 Clone TOVAR2002440 ovary 5' read P
DB383942.1 Clone Y79AA1000154 eye 3' read A
DB055397.1 Clone TESTI2046650 testis 5' read P
DB056433.1 Clone TESTI2048091 testis 5' read P
DB293987.1 Clone Y79AA1000154 eye 5' read P
BG027050.1 Clone IMAGE:4388856 bone 5' read P
BF940084.1 Clone IMAGE:3439610 brain 3' read A
BF870370.1 lung P
BF871457.1 lung P
DB570276.1 Clone H033072F03 brain 3' read PA
DB487013.1 Clone H033016B05 brain 5' read
BG257519.1 Clone IMAGE:4508774 uncharacterized tissue 5' read P
AL518082.3 Clone CS0DA010YG23 uncharacterized tissue 3' read PA
AL518083.3 Clone CS0DA010YG23 uncharacterized tissue 5' read P
DB556341.1 Clone H033016B05 brain 3' read A
AL544900.3 Clone CS0DI012YA04 placenta 5' read
AL570849.3 Clone CS0DI012YA04 placenta 3' read P
BG387956.1 Clone IMAGE:4521284 uncharacterized tissue 5' read P
AU100321.1 Clone adSE00403 uncharacterized tissue 5' read
BG528011.1 Clone IMAGE:4685636 salivary gland 5' read P
N47376.1 Clone IMAGE:277563 brain 5' read
BG619271.1 Clone IMAGE:4730062 placenta 5' read
BI005435.1 thyroid
EL734351.1 mixed 5' read P
BJ991912.1 Clone hkmt-2351 liver 5' read P
BI114105.1 Clone IMAGE:5021620 muscle 5' read
BI333628.1 Clone IMAGE:5139468 cervix 5' read A
DC358472.1 Clone HLUNG2004869 lung 5' read
DC396080.1 Clone TESTI2014726 testis 5' read
DC397770.1 Clone TESTI2032045 testis 5' read
BI490109.1 Clone IMAGE:5173184 mixed 5' read P
BI667636.1 Clone IMAGE:5311962 brain 5' read P
BI757667.1 Clone IMAGE:5198664 brain 5' read P
BI819050.1 Clone IMAGE:5174638 mixed 5' read P
BI822127.1 Clone IMAGE:5180502 mixed 5' read P
BI918960.1 Clone IMAGE:5244654 brain 5' read P
BI917955.1 Clone IMAGE:5245761 brain 5' read P
BM453445.1 Clone IMAGE:5533127 uterus 5' read A
BM551714.1 Clone IMAGE:5548131 skin 5' read P
BM676765.1 Clone UI-E-EJ0-ahu-i-23-0-UI eye 3' read PA
BM697822.1 Clone UI-E-DX0-ago-c-24-0-UI eye 5' read P
BM719904.1 Clone UI-E-EJ0-ahu-i-23-0-UI eye 5' read P
W58355.1 Clone IMAGE:341564 heart 5' read P
BM821719.1 Clone S20T665307-15-F02 stomach 5' read P
BM875516.1 Clone IMAGE:5635075 pancreas 3' read PA
BM875772.1 Clone IMAGE:5635075 pancreas 5' read P
T52764.1 Clone IMAGE:67890 ovary 3' read
BM968216.1 Clone UI-CF-DU1-aao-i-06-0-UI lung 3' read PA
BM973453.1 Clone UI-CF-EC1-abx-p-01-0-UI lung 3' read PA
BM980911.1 Clone UI-CF-EN1-ade-d-05-0-UI lung 3' read A
AL707578.1 Clone DKFZp686J0948 muscle 5' read P
W90641.1 Clone IMAGE:417965 mixed 3' read A
W90300.1 Clone IMAGE:417965 mixed 5' read P
BQ019436.1 Clone IMAGE:5824708 connective tissue 3' read PA
BQ181992.1 Clone IMAGE:5854652 connective tissue 3' read PA
BQ225661.1 Clone IMAGE:6095634 skin 5' read P
BQ277864.1 Clone IMAGE:5804743 ovary 5' read P
AA025508.1 Clone IMAGE:366303 heart 5' read P
AA025911.1 Clone IMAGE:366303 heart 3' read A
BQ719186.1 Clone IMAGE:6194973 nerve 5' read P
AA045824.1 Clone IMAGE:488649 uterus 3' read A
AA045939.1 Clone IMAGE:488649 uterus 5' read P
BQ889348.1 Clone IMAGE:6182449 ganglia 5' read P
BQ889850.1 Clone IMAGE:6185087 ganglia 5' read P
BQ940953.1 Clone IMAGE:6203414 nerve 5' read P
BQ942394.1 Clone IMAGE:6204207 nerve 5' read P
BU195341.1 Clone IMAGE:6169832 eye 5' read P
BU173522.1 Clone IMAGE:6174172 uterus 5' read P
FN137611.1 Clone 214645_0641_0801
FN114381.1 Clone 156778_1096_0395
FN155185.1 Clone 253988_0638_0896
BU597191.1 Clone IMAGE:6453989 mixed 5' read P
BU629708.1 Clone UI-H-FL0-bdj-p-06-0-UI bone 3' read PA
BU687950.1 Clone UI-CF-EC1-adx-o-03-0-UI lung 3' read PA
BU737088.1 Clone UI-E-DX0-ago-c-24-0-UI eye 3' read A
BU738947.1 Clone UI-E-EJ0-ahu-i-23-0-UI eye 3' read PA
BU903010.1 Clone IMAGE:6528433 uterus 5' read P
AA236937.1 Clone IMAGE:683918 lymph node 3' read P
AA237086.1 Clone IMAGE:683918 lymph node 5' read P
HY047172.1 Clone H04D165K14 testis P
CA420782.1 Clone UI-H-FG0-bcq-l-09-0-UI bone 3' read PA
CA425626.1 Clone UI-H-FE1-bdy-j-12-0-UI bone 3' read PA
AA295048.1 pancreas 5' read
AA295260.1 pancreas 5' read
CA448240.1 Clone UI-H-ED1-ayc-h-18-0-UI connective tissue 3' read A
CA489062.1 Clone IMAGE:6721315 mixed 5' read P
AA317608.1 eye 5' read
AA455638.1 Clone IMAGE:813977 lymph node 3' read P
AA455691.1 Clone IMAGE:813977 lymph node 5' read P
AA582235.1 Clone IMAGE:1087452 kidney 3' read A
AA613051.1 Clone IMAGE:1146377 intestine 3' read
AA676557.1 Clone IMAGE:433082 mixed 3' read A
AA701484.1 Clone IMAGE:435433 mixed 3' read A
AA705343.1 Clone IMAGE:462064 mixed 3' read A
AA780023.1 Clone IMAGE:462016 mixed 3' read PA
AA806111.1 Clone IMAGE:1350721 lymph node 3' read A
AA810053.1 Clone IMAGE:1367697 lymph node 3' read A
AA815150.1 Clone IMAGE:1339854 lymph node 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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