Solute carrier organic anion transporter family, member 5A1 (SLCO5A1)

Restricted Expression:

fetus [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

uncharacterized tissue; brain; pancreas; kidney; testis; intestine; spleen; muscle; blood; thymus; mixed; connective tissue

NCBI

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Finding cDNAs

UGID:238646 UniGene Hs.443609 Homo sapiens (human) SLCO5A1

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Solute carrier organic anion transporter family, member 5A1 (SLCO5A1)

Human protein-coding gene SLCO5A1. Represented by 49 ESTs from 19 cDNA libraries. EST representation biased toward fetus. Corresponds to 3 reference sequences (different isoforms). [UniGene 238646 - Hs.443609]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_112220.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	SLCO5A1 gene product	H. sapiens	100.0	847
XP_528160.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: solute carrier organic anion transporter family member 5A1 isoform 2	P. troglodytes	99.5	847
NP_766429.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	solute carrier organic anion transporter family, member 5A1	M. musculus	93.6	848
XP_684701.3 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: solute carrier organic anion transporter family member 5A1-like	D. rerio	80.3	817
Other hits (2 of 21) [Show all]		Species	Id(%)	Len(aa)
XP_003902895.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: solute carrier organic anion transporter family member 5A1	P. anubis	99.3	847
XP_001099455.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: solute carrier organic anion transporter family member 5A1 isoform 1	M. mulatta	99.3	845

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	8
	Map position:	8q13.3

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

AK022760.1	Homo sapiens cDNA FLJ12698 fis, clone NT2RP1000677, highly similar to Solute carrier organic anion transporter family member 5A1	P
AF205075.1	Homo sapiens organic anion transporter polypeptide-related protein 4 (OATPRP4) mRNA, complete cds	P
NM_030958.2	Homo sapiens solute carrier organic anion transporter family, member 5A1 (SLCO5A1), transcript variant 1, mRNA	PA
BC139755.1	Homo sapiens solute carrier organic anion transporter family, member 5A1, mRNA (cDNA clone MGC:149824 IMAGE:40118841), complete cds	P
AK308488.1	Homo sapiens cDNA, FLJ98529	P
AK307567.1	Homo sapiens cDNA, FLJ97515	P
BC137424.1	Homo sapiens solute carrier organic anion transporter family, member 5A1, mRNA (cDNA clone MGC:169045 IMAGE:9021422), complete cds	P
AK097273.1	Homo sapiens cDNA FLJ39954 fis, clone SPLEN2024737
AK096879.1	Homo sapiens cDNA FLJ39560 fis, clone SKMUS2000780, highly similar to Solute carrier organic anion transporter family member 5A1	P
AK299048.1	Homo sapiens cDNA FLJ56827 complete cds, highly similar to Solute carrier organic anion transporter family member 5A1	P
BC016067.2	Homo sapiens solute carrier organic anion transporter family, member 5A1, mRNA (cDNA clone IMAGE:4861524), complete cds	PA
BC144618.1	Homo sapiens cDNA clone IMAGE:9053149	P
NM_001146008.1	Homo sapiens solute carrier organic anion transporter family, member 5A1 (SLCO5A1), transcript variant 2, mRNA	PA
NM_001146009.1	Homo sapiens solute carrier organic anion transporter family, member 5A1 (SLCO5A1), transcript variant 3, mRNA	PA

EST sequences (49)

BX116038.1	Clone IMAGp998L185718_;_IMAGE:2307617	uncharacterized tissue
AI568644.1	Clone IMAGE:2170246	brain	3' read
AI671865.1	Clone IMAGE:2307617	uncharacterized tissue	3' read	A
AI699510.1	Clone IMAGE:2240949	uncharacterized tissue	3' read	A
BX433217.1	Clone CS0DF037YK04	brain	3' read	P
BX452286.1	Clone CS0DF037YK04	brain	5' read	P
AW204447.1	Clone IMAGE:2718205	mixed	3' read	A
CD632980.1		uncharacterized tissue		P
CD632981.1		uncharacterized tissue		P
CD632982.1		uncharacterized tissue		P
CD632990.1		uncharacterized tissue		P
CD632991.1		uncharacterized tissue		P
CD632992.1		uncharacterized tissue		P
CD632993.1		uncharacterized tissue		P
CD632994.1		uncharacterized tissue		P
CD632995.1		uncharacterized tissue		P
CD632996.1		uncharacterized tissue		P
CD632997.1		uncharacterized tissue
CD632983.1		uncharacterized tissue		P
CD632984.1		uncharacterized tissue		P
CD632985.1		uncharacterized tissue		P
CD632986.1		uncharacterized tissue		P
CD632987.1		uncharacterized tissue		P
CD632988.1		uncharacterized tissue		P
CD632989.1		uncharacterized tissue		P
AW769332.1	Clone IMAGE:3005797	intestine	3' read	PA
CK904374.1	Clone IMAGE:5673144	pancreas	5' read	P
CR748822.1	Clone IMAGp998N225545_;_IMAGE:2241237	uncharacterized tissue	5' read
BP244743.1	Clone HKR01357	kidney	5' read	P
BP244750.1	Clone HKR01377	kidney	5' read	P
BE465984.1	Clone IMAGE:3196749	uncharacterized tissue	3' read	A
AU126355.1	Clone NT2RP1000677	testis	5' read
DA023948.1	Clone ASTRO2006422	brain	5' read
DA687992.1	Clone NT2NE2006668		5' read
DA530976.1	Clone FEBRA2024105	brain	5' read
DA644670.1	Clone LYMPB2001653	blood	5' read
DA685451.1	Clone NT2NE2003359		5' read
DA725161.1	Clone NT2RI3006749	testis	5' read	P
DA948355.1	Clone SPLEN2024737	spleen	5' read
DA893640.1	Clone SKMUS2000780	muscle	5' read
DB160474.1	Clone THYMU3040634	thymus	5' read
DB165238.1	Clone THYMU3047205	thymus	5' read	P
DB330914.1	Clone SKMUS2000780	muscle	3' read	P
AL538826.3	Clone CS0DF037YK04	brain	5' read
AL567517.3	Clone CS0DF037YK04	brain	3' read	P
DC369307.1	Clone NT2RI3002175	testis	5' read
BI915782.1	Clone IMAGE:5247411	brain	5' read
BM023337.1	Clone IMAGE:5673144	pancreas	5' read	P
CA449383.1	Clone UI-H-EI1-ayt-i-06-0-UI	connective tissue	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria