> Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C (APOBEC3C)
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UGID:236161     UniGene Hs.441124     Homo sapiens (human)   APOBEC3C Order cDNA clone, Links
Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C (APOBEC3C)

Human protein-coding gene APOBEC3C. Represented by 271 ESTs from 128 cDNA libraries. Corresponds to reference sequence NM_014508.2. [UniGene 236161 - Hs.441124]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055323.2 APOBEC3C gene product H. sapiens 100.0 189
NP_001153887.1 Apobec3 gene product M. musculus 47.2 212
Other hits (2 of 8) [Show all]SpeciesId(%)Len(aa)
NP_001238839.1 probable DNA dC->dU-editing enzyme APOBEC-3C P. troglodytes 98.4 189
NP_001107831.1 APOBEC3C gene product M. mulatta 87.9 189

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; skin; placenta; intestine; blood; lung; eye; kidney; bone marrow; uterus; prostate; connective tissue; amniotic fluid; vascular; trachea; bladder; tonsil; salivary gland; ovary; ascites; liver; mixed; lymph; pancreas; adrenal gland; brain; pharynx; mammary gland; uncharacterized tissue; lymph node; muscle; embryonic tissue; spleen; larynx; bone; esophagus; ganglia; heart; thymus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q13.1
UniSTS entry: G60296
UniSTS entry: Chr 22 STS-N58010 [Map Viewer]
UniSTS entry: Chr 22 APOBEC3C__4342
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

CR456394.1 Homo sapiens bK150C2.3 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.bK150C2.3) P
AF165520.1 Homo sapiens phorbolin I protein (PBI) mRNA, complete cds PA
AB208979.1 Homo sapiens mRNA for apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C variant protein P
BC011739.2 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C, mRNA (cDNA clone MGC:19485 IMAGE:4331363), complete cds PA
AK313272.1 Homo sapiens cDNA, FLJ93783, Homo sapiens apolipoprotein B mRNA editing enzyme, catalyticpolypeptide-like 3C (APOBEC3C), mRNA P
NM_014508.2 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C (APOBEC3C), mRNA PA
BC021080.1 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C, mRNA (cDNA clone IMAGE:3543072) PA
BC007954.2 Homo sapiens cDNA clone IMAGE:4302702, partial cds A

EST sequences (271)

AA864496.1 Clone IMAGE:1460130 kidney 3' read
R23156.1 Clone IMAGE:131015 placenta 3' read
AI129243.1 Clone IMAGE:1711869 uterus 3' read
CB107121.1 Clone L3SNU475-13-E07 liver 5' read P
CB106890.1 Clone L3SNU475-8-C01 liver 5' read P
CB140277.1 Clone L15CKK1-20-F11 liver 5' read P
CB140229.1 Clone L15CKK1-20-A12 liver 5' read P
CB141542.1 Clone L15CKK1-28-C06 liver 5' read P
CB148457.1 Clone L15CKK1-41-A05 liver 5' read P
AI589063.1 Clone IMAGE:2105587 brain 3' read
AI719346.1 Clone IMAGE:2320223 vascular 3' read P
AI804787.1 Clone IMAGE:2253754 prostate 3' read
CB988472.1 Clone IMAGE:30340693 placenta 5' read P
CB959639.1 Clone IMAGE:30344870 placenta 5' read P
CB959666.1 Clone IMAGE:30344760 placenta 5' read P
CB960033.1 Clone IMAGE:30340825 placenta 5' read P
BX328436.2 Clone CS0DB006YJ06 uncharacterized tissue 5' read P
BX347710.2 Clone CS0DB006YJ06 uncharacterized tissue 5' read
BX374550.2 Clone CS0DB006YJ06 uncharacterized tissue 5' read P
CD049358.1 embryonic tissue 5' read P
AW014353.1 Clone IMAGE:2710819 uncharacterized tissue 3' read A
BX475995.1 Clone DKFZp686L18183 muscle 5' read P
CD691370.1 pharynx P
CD698010.1 pharynx P
CD710030.1 pharynx
CD698839.1 pharynx P
AW069654.1 Clone HBMSC_cr49e02 bone marrow 3' read A
AW206297.1 Clone IMAGE:2721620 mixed 3' read PA
AW206611.1 Clone IMAGE:2722728 mixed 3' read A
AW362889.1 intestine
AW405775.1 Clone IMAGE:3057404 lymph node 5' read
R75932.1 Clone IMAGE:159030 mammary gland 5' read
AW891520.1 brain
AW891529.1 brain
CN311847.1 embryonic tissue 5' read P
CN311848.1 embryonic tissue 5' read P
CN311849.1 embryonic tissue 5' read P
CN311850.1 embryonic tissue 5' read P
CN311851.1 embryonic tissue 5' read P
CN311852.1 embryonic tissue 5' read P
AW969735.1 uncharacterized tissue
CV028437.1 mixed 5' read P
BE270056.1 Clone IMAGE:3543176 lymph 5' read P
BE270707.1 Clone IMAGE:3543072 lymph 5' read P
BP196795.1 Clone ADG03049 adrenal gland 5' read P
BP198169.1 Clone ADG07968 adrenal gland 5' read P
BP207941.1 Clone CAS12338 vascular 5' read P
BP224530.1 Clone DAT00715 blood 5' read P
BP226245.1 Clone DMC02066 uncharacterized tissue 5' read P
BP322744.1 Clone PNC03188 pancreas 5' read P
BP354638.1 Clone T7R04534 esophagus 5' read P
BP354675.1 Clone T7R04634 esophagus 5' read P
BP360268.1 Clone THR01465 brain 5' read P
BP338923.1 Clone SPL03694 spleen 5' read P
BP277812.1 Clone KGR00391 brain 5' read P
BE613987.1 Clone IMAGE:3905739 uterus 5' read
BP386168.1 Clone hbt04737 pancreas 3' read
BP391382.1 Clone h-t-244-18 pancreas 3' read
BE736742.1 Clone IMAGE:3640325 pancreas 5' read P
BE875234.1 Clone IMAGE:3890696 lung 5' read P
BE882870.1 Clone IMAGE:3910627 uterus 5' read P
BE883081.1 Clone IMAGE:3911543 uterus 5' read P
BE884183.1 Clone IMAGE:3907761 uterus 5' read P
BE886229.1 Clone IMAGE:3911544 uterus 5' read P
DN995681.1 Clone TC117443 mammary gland 5' read P
BE857162.1 Clone IMAGE:3307103 brain 3' read
BE858758.1 Clone IMAGE:3305506 brain 3' read
BE925187.1 amniotic fluid
BE932566.1 larynx
BE932837.1 larynx
BE937722.1 testis
AV710022.1 Clone CuAAFB05 adrenal gland 5' read P
BF031490.1 Clone IMAGE:3829008 kidney 5' read P
AV732927.1 Clone cdABGF08 adrenal gland 5' read
AV733717.2 Clone cdAAZH01 adrenal gland 5' read P
AV734746.2 Clone cdAAOE11 adrenal gland 5' read P
AV759240.1 Clone MDSAJBT7 bone marrow 5' read A
AV760029.2 Clone MDSBJB01 bone marrow 5' read
AV760698.1 Clone MDSASG12 bone marrow 5' read
AV761609.1 Clone MDSBSF10 bone marrow 5' read P
AV762710.2 Clone MDS4H06 bone marrow 5' read P
AV764197.1 Clone MDSAJB08 bone marrow 5' read P
BF184011.1 Clone IMAGE:4063758 bone marrow 5' read P
BY799196.2 Clone HE4255.seq eye 5' read P
BF245808.1 Clone IMAGE:4083195 brain 5' read P
BF683931.1 Clone IMAGE:4301794 uterus 5' read P
BF684312.1 Clone IMAGE:4302419 uterus 5' read P
BF685212.1 Clone IMAGE:4302702 uterus 5' read
BF686237.1 Clone IMAGE:4304543 uterus 5' read P
DA149520.1 Clone BRAMY2007043 brain 5' read
DA653138.1 Clone MESAN2007804 kidney 5' read P
DA576739.1 Clone HHDPC2004270 skin 5' read P
AW300947.1 Clone IMAGE:2666284 intestine 3' read
DA579473.1 Clone HHDPC2007762 skin 5' read P
DA476107.1 Clone DFNES2005035 skin 5' read P
DA600699.1 Clone HSYRA2005840 connective tissue 5' read P
DA843309.1 Clone PLACE6010973 placenta 5' read P
DA996189.1 Clone SYNOV4009467 connective tissue 5' read P
DA879896.1 Clone PROST2019097 prostate 5' read P
BF439914.1 Clone IMAGE:3273291 mixed 3' read A
DA934704.1 Clone SPLEN2005651 spleen 5' read P
DA818257.1 Clone PEBLM2006476 blood 5' read P
DB023626.1 Clone TESTI2004891 testis 5' read P
DA819072.1 Clone PEBLM2007503 blood 5' read P
DA819782.1 Clone PEBLM2008419 blood 5' read P
DA871072.1 Clone PROST2007430 prostate 5' read P
DA944481.1 Clone SPLEN2019638 spleen 5' read P
BF593697.1 Clone IMAGE:3276324 brain 3' read
DA952801.1 Clone SPLEN2030537 spleen 5' read P
DA953493.1 Clone SPLEN2031459 spleen 5' read P
DA724815.1 Clone NT2RI3006319 testis 5' read P
DA881380.1 Clone PUAEN2000740 vascular 5' read P
DB069100.1 Clone TESTI4011239 testis 5' read P
DB283107.1 Clone UTERU3010607 uterus 5' read P
DB140330.1 Clone THYMU3013295 thymus 5' read P
DB206943.1 Clone TRACH2019416 trachea 5' read P
DB207141.1 Clone TRACH2019683 trachea 5' read P
DB209768.1 Clone TRACH2022824 trachea 5' read P
BF763315.1 intestine P
BF809114.1 intestine P
BF809147.1 intestine P
BF809170.1 intestine P
BF809193.1 intestine P
BF837599.1 larynx P
BF837600.1 larynx P
BG108418.1 Clone IMAGE:4366068 bone 5' read P
BG025943.1 Clone IMAGE:4387055 bone 5' read P
BG032405.1 Clone IMAGE:4402990 mammary gland 5' read P
BF964837.1 Clone IMAGE:4356840 muscle 5' read P
BF971900.1 Clone IMAGE:4328998 uterus 5' read P
BF972444.1 Clone IMAGE:4330226 uterus 5' read P
BF973640.1 Clone IMAGE:4331363 uterus 5' read
BF884530.1 lung
BG257854.1 Clone IMAGE:4508155 uncharacterized tissue 5' read
BG285998.1 Clone IMAGE:4498818 bladder 5' read P
BG338995.1 Clone IMAGE:4554819 uterus 5' read P
BG340355.1 Clone IMAGE:4556326 uterus 5' read P
BG342101.1 Clone IMAGE:4575995 tonsil 5' read P
BF171589.1 blood
BG491147.1 Clone IMAGE:4638407 lung 5' read P
BG541703.1 Clone IMAGE:4695573 lung 5' read P
BG748825.1 Clone IMAGE:4842544 eye 5' read
BG758145.1 Clone IMAGE:4852731 tonsil 5' read P
BG760028.1 Clone IMAGE:4878877 tonsil 5' read P
BG766785.1 Clone IMAGE:4870076 skin 5' read P
BG767487.1 Clone IMAGE:4871278 skin 5' read P
BG769131.1 Clone IMAGE:4873055 skin 5' read P
BI083956.1 Clone IMAGE:5013937 salivary gland 5' read
BI013475.1 lung P
BG951360.1 intestine
T47212.1 Clone IMAGE:74947 ovary 5' read
T47213.1 Clone IMAGE:74947 ovary 3' read
BI227274.1 Clone IMAGE:5092885 lymph 5' read P
BI197603.1 Clone IMAGE:4892875 brain 5' read
BI545718.1 Clone IMAGE:5259850 brain 5' read P
BI762272.1 Clone IMAGE:5189566 mixed 5' read PA
BI859429.1 Clone IMAGE:5396991 mammary gland 5' read P
BM014223.1 Clone IMAGE:5415847 mammary gland 5' read P
BM017733.1 Clone IMAGE:5426787 brain 5' read P
BM142271.1 Clone IMAGE:5678153 pancreas 5' read P
BM273154.1 Clone IMAGE:5677930 pancreas 3' read A
BM354112.1 Clone IMAGE:5677930 pancreas 5' read P
BM424095.1 Clone IMAGE:5517354 skin 5' read P
BM473129.1 Clone IMAGE:5519674 uterus 5' read P
BM474553.1 Clone IMAGE:5521779 uterus 5' read P
BM559604.1 Clone IMAGE:5476163 skin 5' read P
BM663561.1 Clone UI-E-CI1-abb-c-11-0-UI eye 3' read A
BM691079.1 Clone UI-E-CI1-abb-c-11-0-UI eye 5' read
BM809617.1 Clone IMAGE:5467908 skin 5' read P
BM787460.1 Clone S11SNU1-21-F01 ascites 5' read P
BM787820.1 Clone S11SNU1-23-F09 ascites 5' read P
BM797791.1 Clone S22SNU16n1-79-E11 ascites 5' read P
BM827706.1 Clone S11SNU1-39-H06 ascites 5' read P
BM828952.1 Clone S11SNU1-27-B04 ascites 5' read P
BM834438.1 Clone S11SNU1-61-F10 ascites 5' read P
BM834645.1 Clone S11SNU1-68-H12 ascites 5' read P
BM834925.1 Clone S11SNU1-51-F06 ascites 5' read P
BM913703.1 Clone IMAGE:5477393 brain 5' read P
BM914942.1 Clone IMAGE:5480669 skin 5' read P
BM917194.1 Clone IMAGE:5483691 blood 5' read PA
BM922257.1 Clone IMAGE:5754412 mixed 5' read P
BM922741.1 Clone IMAGE:5755845 blood 5' read
BM981454.1 Clone UI-CF-EN1-adh-b-08-0-UI lung 3' read PA
BM982985.1 Clone UI-CF-EN1-acs-j-02-0-UI lung 3' read A
BQ056030.1 Clone IMAGE:5808301 lymph 5' read P
BQ058970.1 Clone IMAGE:5814941 lymph 5' read P
BQ061901.1 Clone IMAGE:5921403 lymph 5' read P
BQ063928.1 Clone IMAGE:5925597 lymph 5' read P
BQ064464.1 Clone IMAGE:5926199 lymph 5' read PA
BQ065295.1 Clone IMAGE:5929815 lymph 5' read P
BQ354493.1 larynx
BQ707723.1 Clone IMAGE:6282278 spleen 5' read P
BG117857.1 Clone IMAGE:4445558 liver 5' read P
BG122247.1 Clone IMAGE:4445208 liver 5' read P
BQ877348.1 Clone IMAGE:6087076 salivary gland 5' read P
BQ889621.1 Clone IMAGE:6180675 ganglia 5' read P
BU166996.1 Clone IMAGE:6163671 skin 5' read P
BU158817.1 Clone IMAGE:6012855 uncharacterized tissue 5' read P
BU188781.1 Clone IMAGE:6110529 skin 5' read
BU190261.1 Clone IMAGE:6090663 skin 5' read
C02840.1 Clone 3NHC0414 heart
C05290.1 Clone 3NHC5168 heart
FN127807.1 Clone 190756_2285_3733
FN173860.1 Clone 301253_2727_1631
FN101767.1 Clone 123172_0284_2660
FN105542.1 Clone 133223_0198_0090
FN092240.1 Clone 096866_3981_1898
BU584132.1 Clone 1849713 lung 5' read
BU598979.1 Clone IMAGE:6457937 mixed 5' read P
BU659587.1 Clone cl49e11 blood 5' read P
BU662240.1 Clone cl83c11 blood 5' read P
AA233019.1 Clone IMAGE:666420 mixed 5' read
BU940566.1 Clone IMAGE:6710437 mixed 5' read P
BU941254.1 Clone IMAGE:6713325 mixed 5' read P
BU942006.1 Clone IMAGE:6714479 mixed 5' read P
BU942100.1 Clone IMAGE:6714617 mixed 5' read P
BU942936.1 Clone IMAGE:6716202 mixed 5' read P
BU959732.1 Clone IMAGE:6738201 mixed 5' read P
HY000643.1 Clone H04D002P15 testis P
HY002482.1 Clone H04D009C19 testis P
HY008157.1 Clone H04D027M07 testis P
HY012061.1 Clone H04D042B16 testis P
HY018146.1 Clone H04D061I05 testis P
HY023827.1 Clone H04D081E16 testis P
HY026717.1 Clone H04D091I23 testis P
HY027316.1 Clone H04D093M04 testis P
HY031067.1 Clone H04D107L16 testis P
HY035746.1 Clone H04D123L12 testis P
HY037548.1 Clone H04D130P11 testis P
HY045486.1 Clone H04D159F15 testis P
HY053172.1 Clone H04D188G17 testis P
HY183932.1 Clone H04D002P15 testis P
HY185944.1 Clone H04D009C19 testis
HY192101.1 Clone H04D027M07 testis
HY196207.1 Clone H04D042B16 testis
HY201349.1 Clone H04D061I05 testis
HY207396.1 Clone H04D081E16 testis
HY210734.1 Clone H04D091I23 testis
HY220850.1 Clone H04D123L12 testis
HY223258.1 Clone H04D130P11 testis
HY231836.1 Clone H04D159F15 testis
GR937117.1 Clone 6866_A02_CLONED_RTPCR 5' read P
GR937129.1 Clone 6866_B02_CLONED_RTPCR 5' read P
GR937153.1 Clone 6866_D02_CLONED_RTPCR 5' read P
GR937165.1 Clone 6866_E02_CLONED_RTPCR 5' read P
GR937201.1 Clone 6866_H02_CLONED_RTPCR 5' read P
GR937213.1 Clone 6866_A02_CLONED_RTPCR 3' read P
GR937225.1 Clone 6866_B02_CLONED_RTPCR 3' read P
GR937249.1 Clone 6866_D02_CLONED_RTPCR 3' read P
GR937261.1 Clone 6866_E02_CLONED_RTPCR 3' read P
GR937297.1 Clone 6866_H02_CLONED_RTPCR 3' read P
GR938135.1 Clone 6871_F02_CLONED_RTPCR 5' read
CA313901.1 Clone UI-CF-FN0-afo-d-03-0-UI lung 3' read PA
AA310771.1 blood 5' read P
AA411764.1 Clone IMAGE:730655 testis 3' read
AA411844.1 Clone IMAGE:730655 testis 5' read
AA483462.1 Clone IMAGE:910016 bone
T91085.1 Clone IMAGE:112575 mixed 3' read
AA485340.1 Clone IMAGE:840297 lung 3' read
AA485496.1 Clone IMAGE:840297 lung 5' read
AA601948.1 Clone IMAGE:1112498 adrenal gland 3' read
AA653679.1 Clone IMAGE:1187312 prostate 3' read A
R07767.1 Clone IMAGE:126890 mixed 5' read
AA806768.1 Clone IMAGE:1338731 lymph node 3' read A
AA810264.1 Clone IMAGE:1367929 lymph node 3' read
AA829388.1 Clone IMAGE:1358402 lymph node 3' read
R10100.1 Clone IMAGE:128863 mixed 3' read
AA830191.1 Clone IMAGE:1352992 lymph node 3' read A
R10201.1 Clone IMAGE:128863 mixed 5' read
AA831521.1 Clone IMAGE:1355156 lymph node 3' read
AA853167.1 Clone NHTBCae03f08 bone


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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