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UGID:224501     UniGene Hs.421437     Homo sapiens (human)   CLEC4M
C-type lectin domain family 4, member M (CLEC4M)

Human protein-coding gene CLEC4M. Represented by 58 ESTs from 26 cDNA libraries. Corresponds to 12 reference sequences (different isoforms). [UniGene 224501 - Hs.421437]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055072.3 CLEC4M gene product H. sapiens 100.0 398
NP_081248.2 CD209 antigen-like protein B isoform a M. musculus 57.0 319
Other hits (2 of 10) [Show all]SpeciesId(%)Len(aa)
XP_003953384.1 PREDICTED: C-type lectin domain family 4 member M-like P. troglodytes 97.2 398
NP_001028042.1 CD209 gene product M. mulatta 85.1 402

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; liver; testis; mixed; uncharacterized tissue; adrenal gland; brain; uterus; lung; connective tissue; intestine
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19p13
UniSTS entry: Chr 19 RH65100
UniSTS entry: Chr 19 PMC140574P2
UniSTS entry: Chr 19 PMC140574P1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (29)

AB015629.1 Homo sapiens mRNA for type II membrane protein similar to HIV gp120-binding C-type lectin, complete cds, clone:HP01347 P
NM_014257.4 Homo sapiens C-type lectin domain family 4, member M (CLEC4M), transcript variant 1, mRNA PA
AY343913.1 Homo sapiens L-SIGN variant (CD209L) mRNA, complete cds P
AF245219.2 Homo sapiens probable mannose binding C-type lectin DC-SIGNR mRNA, complete cds P
BC110614.2 Homo sapiens C-type lectin domain family 4, member M, mRNA (cDNA clone MGC:129964 IMAGE:40032453), complete cds P
AF290887.1 Homo sapiens L-SIGN mRNA, complete cds P
AY042240.1 Homo sapiens sDC-SIGN2 type III isoform (CD209L) mRNA, complete cds, alternatively spliced P
AY042239.1 Homo sapiens sDC-SIGN2 type II isoform (CD209L) mRNA, complete cds, alternatively spliced P
AY042238.1 Homo sapiens sDC-SIGN2 type I isoform (CD209L) mRNA, complete cds, alternatively spliced P
AY042237.1 Homo sapiens mDC-SIGN2 type VI isoform (CD209L) mRNA, complete cds, alternatively spliced P
AY042236.1 Homo sapiens mDC-SIGN2 type IV isoform (CD209L) mRNA, complete cds, alternatively spliced P
AY042235.1 Homo sapiens mDC-SIGN2 type III isoform (CD209L) mRNA, complete cds, alternatively spliced P
AY042234.1 Homo sapiens mDC-SIGN2 type I isoform (CD209L) mRNA, complete cds, alternatively spliced P
AK292278.1 Homo sapiens cDNA FLJ77783 complete cds, highly similar to Homo sapiens CD209 antigen-like (CD209L), mRNA P
AK314704.1 Homo sapiens cDNA, FLJ95558 P
AK298084.1 Homo sapiens cDNA FLJ55003 complete cds, highly similar to Homo sapiens C-type lectin domain family 4, member M (CLEC4M), transcript variant 6, mRNA P
AK304499.1 Homo sapiens cDNA FLJ52840 complete cds, highly similar to C-type lectin domain family 4 member M P
NM_001144911.1 Homo sapiens C-type lectin domain family 4, member M (CLEC4M), transcript variant 3, mRNA PA
NM_001144910.1 Homo sapiens C-type lectin domain family 4, member M (CLEC4M), transcript variant 8, mRNA PA
NM_001144909.1 Homo sapiens C-type lectin domain family 4, member M (CLEC4M), transcript variant 9, mRNA PA
NM_001144908.1 Homo sapiens C-type lectin domain family 4, member M (CLEC4M), transcript variant 10, mRNA PA
NM_001144907.1 Homo sapiens C-type lectin domain family 4, member M (CLEC4M), transcript variant 11, mRNA PA
NM_001144906.1 Homo sapiens C-type lectin domain family 4, member M (CLEC4M), transcript variant 7, mRNA PA
NM_001144905.1 Homo sapiens C-type lectin domain family 4, member M (CLEC4M), transcript variant 12, mRNA PA
NM_001144904.1 Homo sapiens C-type lectin domain family 4, member M (CLEC4M), transcript variant 2, mRNA PA
NR_026709.1 Homo sapiens C-type lectin domain family 4, member M (CLEC4M), transcript variant 6, non-coding RNA PA
NR_026708.1 Homo sapiens C-type lectin domain family 4, member M (CLEC4M), transcript variant 5, non-coding RNA PA
NR_026707.1 Homo sapiens C-type lectin domain family 4, member M (CLEC4M), transcript variant 4, non-coding RNA PA
BC038851.1 Homo sapiens C-type lectin domain family 4, member M, mRNA (cDNA clone MGC:47866 IMAGE:5166966), complete cds PA

EST sequences (58)

R24914.1 Clone IMAGE:132033 placenta 5' read
BX102225.1 Clone IMAGp998P065786_;_IMAGE:2332661 intestine
CB162093.1 Clone L17N670205n1-17-C01 liver 5' read P
BX339292.2 Clone CS0DI070YH15 placenta 5' read P
BX370071.2 Clone CS0DI070YH15 placenta 5' read P
BX448852.2 Clone CS0DM012YC15 liver 3' read P
BX448853.2 Clone CS0DM012YC15 liver 5' read P
CD625419.1 uncharacterized tissue
CD625420.1 uncharacterized tissue
R80140.1 Clone IMAGE:146996 placenta 5' read P
R80141.1 Clone IMAGE:146996 placenta 3' read A
H00185.1 Clone IMAGE:149525 placenta 3' read A
H00237.1 Clone IMAGE:149525 placenta 5' read
H01729.1 Clone IMAGE:150055 placenta 5' read
CV030956.1 mixed 5' read P
BE562903.1 Clone IMAGE:3690319 uterus 5' read P
AV645629.1 Clone GLCACD12 liver 3' read
AV645755.1 Clone GLCAED05 liver 3' read P
R96810.1 Clone IMAGE:200714 mixed 3' read A
R98113.1 Clone IMAGE:200714 mixed 5' read P
BF091127.1 testis
DA010010.1 Clone ADRGL2001439 adrenal gland 5' read P
DA640734.1 Clone LIVER2005724 liver 5' read P
DA641265.1 Clone LIVER2006566 liver 5' read
DA642565.1 Clone LIVER2008588 liver 5' read P
AU140165.1 Clone PLACE2000062 placenta 5' read P
DA638933.1 Clone LIVER2003002 liver 5' read P
DA639306.1 Clone LIVER2003574 liver 5' read P
DA639717.1 Clone LIVER2004175 liver 5' read P
DA844226.1 Clone PLACE6012080 placenta 5' read P
DA838301.1 Clone PLACE6004555 placenta 5' read P
DB048046.1 Clone TESTI2037001 testis 5' read P
DB048428.1 Clone TESTI2037455 testis 5' read P
DA830764.1 Clone PLACE1005698 placenta 5' read P
DB030283.1 Clone TESTI2013802 testis 5' read P
DA835259.1 Clone PLACE6000471 placenta 5' read P
DB376080.1 Clone PLACE1005698 placenta 3' read A
H90312.1 Clone IMAGE:240697 mixed 3' read A
H90360.1 Clone IMAGE:241372 mixed 5' read
H90968.1 Clone IMAGE:240697 mixed 5' read
H91270.1 Clone IMAGE:241372 mixed 3' read A
AL544658.3 Clone CS0DI022YH14 placenta 5' read P
AL570816.3 Clone CS0DI022YH14 placenta 3' read
DT218186.1 brain P
DC419787.1 Clone UTERU2002217 uterus 5' read P
DC359031.1 Clone HLUNG2012855 lung 5' read P
BI827055.1 Clone IMAGE:5167447 brain 5' read P
BI828875.1 Clone IMAGE:5166966 brain 5' read P
BQ006101.1 Clone IMAGE:5845832 connective tissue 3' read A
BQ008265.1 Clone IMAGE:5838324 connective tissue 3' read A
AA002266.1 Clone IMAGE:427781 mixed 3' read
HY039435.1 Clone H04D137O08 testis P
HY225359.1 Clone H04D137O08 testis
HY237161.1 Clone H04D176J03 testis
AA431250.1 Clone IMAGE:782332 testis 5' read
AA448002.1 Clone IMAGE:782758 testis 3' read A
AA448145.1 Clone IMAGE:782758 testis 5' read
AA779963.1 Clone IMAGE:461966 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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