> Transmembrane protein 38B (TMEM38B)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:221902     UniGene Hs.411925     Homo sapiens (human)   TMEM38B Order cDNA clone, Links
Transmembrane protein 38B (TMEM38B)

Human protein-coding gene TMEM38B. Represented by 260 ESTs from 97 cDNA libraries. Corresponds to reference sequence NM_018112.2. [UniGene 221902 - Hs.411925]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_060582.1 TMEM38B gene product H. sapiens 100.0 290
XP_001139453.1 PREDICTED: trimeric intracellular cation channel type B isoform 3 P. troglodytes 99.7 290
NP_082329.1 Tmem38b gene product M. musculus 80.1 291
NP_001086006.1 trimeric intracellular cation channel type B-B X. laevis 63.1 278
NP_956470.1 tmem38b gene product D. rerio 53.8 240
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_001106014.2 PREDICTED: trimeric intracellular cation channel type B-like M. mulatta 98.6 290
XP_003911454.1 PREDICTED: trimeric intracellular cation channel type B P. anubis 98.3 290

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; brain; kidney; stomach; placenta; connective tissue; mixed; liver; lung; muscle; embryonic tissue; parathyroid; adrenal gland; uncharacterized tissue; mammary gland; skin; prostate; heart; pancreas; intestine; eye; thyroid; blood; uterus; bone; cervix; ganglia; pineal gland; vascular
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q31.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK001355.1 Homo sapiens cDNA FLJ10493 fis, clone NT2RP2000274 P
CR457258.1 Homo sapiens full open reading frame cDNA clone RZPDo834C0113D for gene FLJ10493, hypothetical protein FLJ10493; complete cds, incl. stopcodon P
NM_018112.2 Homo sapiens transmembrane protein 38B (TMEM38B), mRNA PA
BC000049.2 Homo sapiens transmembrane protein 38B, mRNA (cDNA clone MGC:960 IMAGE:3506969), complete cds PA
AK309686.1 Homo sapiens cDNA, FLJ99727 P
BC031938.1 Homo sapiens transmembrane protein 38B, mRNA (cDNA clone IMAGE:4827733), with apparent retained intron PA

EST sequences (260)

AA973084.1 Clone IMAGE:1579758 mixed 3' read
AA993178.1 Clone IMAGE:1624302 embryonic tissue 3' read A
AI017401.1 Clone IMAGE:1635330 kidney 3' read P
AI041077.1 Clone IMAGE:1641086 testis 3' read A
AI051317.1 Clone IMAGE:1647494 parathyroid 3' read A
CB045000.1 Clone IMAGE:3218170 intestine 3' read A
CB045001.1 Clone IMAGE:3218170 intestine 5' read P
BX112234.1 Clone IMAGp998E055567_;_IMAGE:2249452 prostate A
BX091254.1 Clone IMAGp998K09727_;_IMAGE:321536 parathyroid
AI373949.1 Clone IMAGE:2041940 uterus 3' read A
AI494173.1 Clone IMAGE:2130471 kidney 5' read P
AI613044.1 Clone IMAGE:2284274 kidney 3' read PA
AI693504.1 Clone IMAGE:2330902 mixed 3' read A
AI796730.1 Clone IMAGE:2298050 kidney 3' read A
BX282756.1 Clone IMAGp998E2012217_;_IMAGE:5533051 uterus
AI864277.1 Clone IMAGE:2371156 mixed 3' read P
Z19267.1 Clone 09F11 muscle
AI926566.1 Clone IMAGE:2458415 stomach 3' read A
AI640620.1 Clone IMAGE:2298252 kidney 3' read A
CB959348.1 Clone IMAGE:30350970 mixed 5' read
CB989041.1 Clone IMAGE:30346137 placenta 5' read P
CB989966.1 Clone IMAGE:30347825 placenta 5' read P
CD109576.1 Clone IMAGE:30347135 placenta 5' read P
CB992992.1 Clone IMAGE:30334699 placenta 5' read P
CB853348.1 Clone UI-CF-FN0-agc-c-24-0-UI lung 3' read A
CD243835.1 Clone IMAGE:30378610 testis 5' read P
AI971445.1 Clone IMAGE:2478930 uncharacterized tissue 3' read PA
CD364527.1 Clone UI-H-FT2-bjl-k-07-0-UI lung 3' read PA
BX500764.1 Clone DKFZp779O0258 liver 5' read
BX500610.1 Clone DKFZp779K1057 liver 5' read P
BX500621.1 Clone DKFZp779L0357 liver 5' read P
BX506406.1 Clone DKFZp779B1713 liver 5' read
AW089401.1 Clone IMAGE:2592851 brain 3' read A
AW105143.1 Clone IMAGE:2603439 mixed 3' read PA
CF141847.1 Clone IMAGE:3099475 prostate 5' read
BX646991.1 Clone DKFZp779L1947 liver 5' read P
CF528964.1 Clone UI-1-BC1p-akt-g-07-0-UI placenta 3' read A
AW237521.1 Clone IMAGE:2689791 kidney 3' read A
AW242635.1 Clone IMAGE:2692459 kidney 3' read A
AW271539.1 Clone IMAGE:2769742 kidney 3' read A
CF993814.1 Clone IMAGE:30705924 placenta 5' read P
AW452608.1 Clone IMAGE:3068548 uncharacterized tissue 3' read A
AW664998.1 Clone IMAGE:2979152 mixed 3' read PA
AW873743.1 Clone IMAGE:3120797 adrenal gland 3' read A
CN481297.1 Clone hw05h01 eye 5' read P
AW954675.1 uncharacterized tissue P
CN365406.1 embryonic tissue 5' read
BE169646.1 thyroid
BE173729.1 thyroid P
BE311749.1 Clone IMAGE:3507274 kidney 5' read P
BP198088.1 Clone ADG07754 adrenal gland 5' read P
BE273683.1 Clone IMAGE:3506969 kidney 5' read P
BP220863.1 Clone COL05638 intestine 5' read P
BP344005.1 Clone SYN00945 connective tissue 5' read P
BP258591.1 Clone HRT03896 heart 5' read P
BP258662.1 Clone HRT04132 heart 5' read
BP258953.1 Clone HRT05060 heart 5' read P
BP275058.1 Clone KDN02709 kidney 5' read P
BP275473.1 Clone KDN03633 kidney 5' read P
BP275588.1 Clone KDN03941 kidney 5' read P
BP276489.1 Clone KDN06521 kidney 5' read P
CX761846.1 Clone IMAGE:7779305 embryonic tissue 5' read
BE709894.1 thyroid
BP398704.1 Clone htp-53-36 pancreas 3' read A
BE739364.1 Clone IMAGE:3826388 kidney 5' read P
BE739606.1 Clone IMAGE:3826388 kidney 3' read
BE831801.1 blood
BE839275.1 prostate P
DN996373.1 Clone TC111318 mammary gland 5' read P
BE896630.1 Clone IMAGE:3925017 skin 5' read P
AU126957.1 Clone NT2RP2000274 testis 5' read P
AU132973.1 Clone NT2RP4000998 testis 5' read
AU137438.1 Clone PLACE1006483 placenta 5' read P
BY796980.2 Clone HE2039.seq eye 5' read P
BF216844.1 Clone IMAGE:4095475 brain 5' read
BF313052.1 Clone IMAGE:4125709 brain 5' read P
DN915689.1 Clone MCF7_RNA_L_20_J03 mammary gland
BF666604.1 Clone IMAGE:4278667 brain 5' read
BF668205.1 Clone IMAGE:4279966 brain 5' read
BF669135.1 Clone IMAGE:4277205 brain 5' read
BF670879.1 Clone IMAGE:4291096 muscle 5' read
BF672594.1 Clone IMAGE:4293091 muscle 5' read
BF672677.1 Clone IMAGE:4293234 muscle 5' read
BF691304.1 Clone IMAGE:4332873 skin 5' read
BF695602.1 Clone IMAGE:4076356 brain 5' read
BF698023.1 Clone IMAGE:4286935 brain 5' read
BF700557.1 Clone IMAGE:4285399 brain 5' read
BF701464.1 Clone IMAGE:4282984 brain 5' read
DA265539.1 Clone BRCAN2018800 brain 5' read P
DA662404.1 Clone MESTC2000501 uncharacterized tissue 5' read P
DA545072.1 Clone HCASM2002749 vascular 5' read P
DA468448.1 Clone D9OST2000468 blood 5' read P
DA407041.1 Clone BRTHA3012505 brain 5' read P
AW614994.1 Clone IMAGE:2953455 kidney 3' read A
AU149707.1 Clone NT2RP2000274 testis 3' read
AU154397.1 Clone NT2RP4000998 testis 3' read A
AU157176.1 Clone PLACE1006483 placenta 3' read A
DA733929.1 Clone NT2RP2004080 testis 5' read P
DA998256.1 Clone T1ESE2002435 uncharacterized tissue 5' read P
DA822686.1 Clone PERIC2003008 heart 5' read P
DA711528.1 Clone NT2RI2017373 5' read
DA823274.1 Clone PERIC2003750 heart 5' read P
DA713049.1 Clone NT2RI2019525 5' read P
DA707839.1 Clone NT2RI2012447 5' read P
BF541947.1 Clone IMAGE:4067485 kidney 5' read
BF571982.1 Clone IMAGE:4252490 skin 5' read
BF572076.1 Clone IMAGE:4244121 skin 5' read
BF576810.1 Clone IMAGE:4272004 muscle 5' read
BF791901.1 Clone IMAGE:4344613 adrenal gland 5' read A
DA757333.1 Clone NT2RP8004451 testis 5' read P
DB185167.1 Clone TLIVE2004798 liver 5' read P
DB365931.1 Clone NT2RP2004080 testis 3' read A
DW445786.1 liver
BG110382.1 Clone IMAGE:4366749 bone 5' read
BF978888.1 Clone IMAGE:4308013 skin 5' read
DB500386.1 Clone H033076J12 brain 5' read P
DB531744.1 Clone H023015G16 brain 3' read A
DB463535.1 Clone H023005K24 brain 5' read P
DB483537.1 Clone H023097L17 brain 5' read P
DB533426.1 Clone H023023F15 brain 3' read A
DB547540.1 Clone H023080L01 brain 3' read
DB577503.1 Clone H033098C08 brain 3' read A
DB464354.1 Clone H023010D06 brain 5' read P
DB442423.1 Clone H013004E12 testis 5' read P
DB519219.1 Clone H013062N21 testis 3' read A
DB465207.1 Clone H023015G16 brain 5' read P
DB503716.1 Clone H033088N16 brain 5' read P
DB485509.1 Clone H033008E17 brain 5' read P
DB503784.1 Clone H033089C09 brain 5' read
DB466588.1 Clone H023023F15 brain 5' read P
DB444989.1 Clone H013017O17 testis 5' read P
DB444990.1 Clone H013017O18 testis 5' read P
DB536105.1 Clone H023034H08 brain 3' read
DB487308.1 Clone H033017F05 brain 5' read
DB536565.1 Clone H023036D02 brain 3' read A
DB571540.1 Clone H033076J12 brain 3' read A
DB446511.1 Clone H013025M18 testis 5' read
DB506189.1 Clone H033098C08 brain 5' read P
DB468700.1 Clone H023034H08 brain 5' read
DB507262.1 Clone H013004E12 testis 3' read A
DB523758.1 Clone H013081E13 testis 3' read A
DB552461.1 Clone H023097L17 brain 3' read A
DB509974.1 Clone H013017O17 testis 3' read A
DB509975.1 Clone H013017O18 testis 3' read A
DB453764.1 Clone H013062N21 testis 5' read P
DB511734.1 Clone H013025M18 testis 3' read A
DB554575.1 Clone H033008E17 brain 3' read A
DB511861.1 Clone H013027F15 testis 3' read A
DB574951.1 Clone H033088N16 brain 3' read
DB575022.1 Clone H033089C09 brain 3' read A
DB529336.1 Clone H023005F04 brain 3' read A
DB529436.1 Clone H023005K24 brain 3' read A
DB478876.1 Clone H023080L01 brain 5' read P
DB556651.1 Clone H033017F05 brain 3' read A
DB530566.1 Clone H023010D06 brain 3' read A
DB530921.1 Clone H023011L14 brain 3' read A
BG430893.1 Clone IMAGE:4614573 kidney 5' read P
BG432735.1 Clone IMAGE:4610093 kidney 5' read
BG401307.1 Clone IMAGE:4593365 kidney 5' read P
BG528712.1 Clone IMAGE:4713597 prostate 5' read
BG611047.1 Clone IMAGE:4737357 prostate 5' read
BG184982.1 connective tissue P
BG191785.1 connective tissue PA
BG194372.1 connective tissue PA
BG196851.1 connective tissue P
BG198362.1 connective tissue P
N53419.1 Clone IMAGE:284096 brain 3' read P
N53432.1 Clone IMAGE:284120 brain 3' read
BG207220.1 connective tissue P
BG208270.1 connective tissue
BG212468.1 connective tissue PA
BG213509.1 connective tissue P
BG777741.1 Clone IMAGE:4804918 prostate 5' read P
BG777753.1 Clone IMAGE:4805160 prostate 5' read
BG770915.1 Clone IMAGE:4839535 prostate 5' read
BG702615.1 Clone IMAGE:4816975 brain 5' read
BG715213.1 Clone IMAGE:4798291 brain 5' read P
BG717841.1 Clone IMAGE:4826294 testis 5' read P
BG719394.1 Clone IMAGE:4822512 testis 5' read P
BG719569.1 Clone IMAGE:4822401 testis 5' read P
BG721959.1 Clone IMAGE:4830649 testis 5' read P
BJ992255.1 Clone hkmt-2808 liver 5' read P
BJ992256.1 Clone hkmt-2808 liver 3' read
BJ993284.1 Clone hmfn-1007 liver 5' read P
BJ993285.1 Clone hmfn-1007 liver 3' read
BG723020.1 Clone IMAGE:4827733 testis 5' read
BI257814.1 Clone IMAGE:5109434 cervix 5' read P
BI460271.1 Clone IMAGE:5267855 testis 5' read P
BI463553.1 Clone IMAGE:5269270 testis 5' read P
BI667292.1 Clone IMAGE:5312051 brain 5' read P
BI667995.1 Clone IMAGE:5314901 brain 5' read P
BI670184.1 Clone IMAGE:5313534 brain 5' read
BI596592.1 Clone IMAGE:5285388 brain 5' read
BI599544.1 Clone IMAGE:5299707 brain 5' read P
BI603247.1 Clone IMAGE:5287248 brain 5' read P
BI603441.1 Clone IMAGE:5299159 brain 5' read P
BI549504.1 Clone IMAGE:5263672 brain 5' read P
BI550301.1 Clone IMAGE:5275951 brain 5' read P
BI552250.1 Clone IMAGE:5275299 brain 5' read P
BI552360.1 Clone IMAGE:5273890 brain 5' read
BI553336.1 Clone IMAGE:5264873 brain 5' read P
BI829914.1 Clone IMAGE:5171791 brain 5' read
BM021158.1 Clone IMAGE:5672740 pancreas 3' read A
BM021419.1 Clone IMAGE:5672740 pancreas 5' read
BM023139.1 Clone IMAGE:5673119 pancreas 3' read A
BM023411.1 Clone IMAGE:5673119 pancreas 5' read
BM090568.1 pancreas 5' read
BM090798.1 pancreas 3' read A
BM452504.1 Clone IMAGE:5493459 eye 5' read
BM453524.1 Clone IMAGE:5533051 uterus 5' read
W32470.1 Clone IMAGE:321536 parathyroid 3' read A
W32656.1 Clone IMAGE:321536 parathyroid 5' read
BM917147.1 Clone IMAGE:5483642 blood 5' read P
BM972594.1 Clone UI-CF-EC1-abp-g-08-0-UI lung 3' read A
AL698016.1 Clone DKFZp686O01105 muscle 5' read P
AL701712.1 Clone DKFZp686G05148 muscle 5' read P
AL707591.1 Clone DKFZp686L2348 muscle 5' read P
BQ009453.1 Clone IMAGE:5834370 connective tissue 3' read PA
BQ894104.1 Clone IMAGE:6185069 ganglia 5' read P
BU159802.1 Clone IMAGE:6144407 eye 5' read
BU176484.1 Clone IMAGE:6145033 eye 5' read
BU600054.1 Clone IMAGE:6463402 mixed 5' read P
AA196635.1 Clone IMAGE:645956 testis 3' read A
AA196917.1 Clone IMAGE:645956 testis 5' read
BU933652.1 Clone IMAGE:6698800 mixed 5' read
HY003846.1 Clone H04D013K21 testis P
HY006384.1 Clone H04D022C20 testis P
HY008726.1 Clone H04D030K24 testis P
HY013282.1 Clone H04D046C21 testis
HY015166.1 Clone H04D052E11 testis
HY021892.1 Clone H04D074F07 testis P
HY023644.1 Clone H04D080K23 testis P
HY025510.1 Clone H04D087D09 testis P
HY028153.1 Clone H04D096P17 testis P
HY029936.1 Clone H04D103N01 testis P
HY031818.1 Clone H04D110C03 testis P
HY033702.1 Clone H04D116I18 testis P
HY036426.1 Clone H04D126A04 testis P
HY043235.1 Clone H04D152E11 testis P
HY043926.1 Clone H04D154H09 testis P
HY044245.1 Clone H04D155G17 testis P
HY056106.1 Clone H04D198J11 testis P
HY187399.1 Clone H04D013K21 testis
HY190204.1 Clone H04D022C20 testis
HY193052.1 Clone H04D030K24 testis
HY197515.1 Clone H04D046C21 testis P
HY205135.1 Clone H04D074F07 testis
HY207266.1 Clone H04D080K23 testis
HY209285.1 Clone H04D087D09 testis
HY221594.1 Clone H04D126A04 testis
HY224995.1 Clone H04D136N07 testis P
HY230549.1 Clone H04D155G17 testis P
HY242801.1 Clone H04D194B08 testis
CA314060.1 Clone UI-CF-FN0-aez-c-09-0-UI lung 3' read A
AA307599.1 intestine 5' read P
AA365183.1 pineal gland 5' read
AA365184.1 pineal gland 5' read
AA370694.1 prostate 5' read
AA580971.1 Clone IMAGE:797360 testis 5' read
AA604921.1 Clone IMAGE:1113201 adrenal gland 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help