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UGID:221360     UniGene Hs.409582     Homo sapiens (human)   C9orf142
Chromosome 9 open reading frame 142 (C9orf142)

Human protein-coding gene C9orf142. Represented by 132 ESTs from 82 cDNA libraries. Corresponds to reference sequence NM_183241.1. [UniGene 221360 - Hs.409582]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_899064.1 C9orf142 gene product H. sapiens 100.0 203
NP_705785.1 BC029214 gene product M. musculus 78.0 199
Other hits (2 of 8) [Show all]SpeciesId(%)Len(aa)
XP_003911097.1 PREDICTED: uncharacterized protein C9orf142 homolog P. anubis 98.0 203
XP_001091722.1 PREDICTED: uncharacterized protein C9orf142-like M. mulatta 97.5 203

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; pancreas; esophagus; uncharacterized tissue; lung; ovary; eye; heart; mixed; bone marrow; cervix; mouth; skin; uterus; testis; embryonic tissue; placenta; mammary gland; bone; kidney; adrenal gland; prostate; blood; thyroid; ascites; connective tissue; liver; intestine; vascular; spleen; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q34.3
UniSTS entry: Chr 9 STS-T23618
UniSTS entry: Chr 9 WI-19910 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_183241.1 Homo sapiens chromosome 9 open reading frame 142 (C9orf142), mRNA PA
BC002613.2 Homo sapiens chromosome 9 open reading frame 142, mRNA (cDNA clone MGC:2999 IMAGE:3161564), complete cds PA
BC038191.1 Homo sapiens chromosome 9 open reading frame 142, mRNA (cDNA clone IMAGE:3873974), partial cds PA

EST sequences (132)

AA954170.1 Clone IMAGE:1591325 kidney 3' read A
AI026656.1 Clone IMAGE:1645624 testis 3' read PA
AI073647.1 Clone IMAGE:1664329 skin 3' read A
T06099.1 Clone HFBDO44 brain
AI080189.1 Clone IMAGE:1677350 mixed 3' read PA
AI089633.1 Clone IMAGE:1696447 uterus 3' read PA
BX110838.1 Clone IMAGp998D14280_;_IMAGE:49485 brain PA
AI267967.1 Clone IMAGE:1911396 lung 3' read A
AA887674.1 Clone IMAGE:1161419 intestine 3' read A
AI084914.1 Clone IMAGE:1750330 brain 3' read PA
AI298745.1 Clone IMAGE:1897099 lung 3' read A
AA770158.1 Clone 1322312 testis 3' read A
AI498802.1 Clone IMAGE:2163250 brain 3' read PA
R53404.1 Clone IMAGE:154087 mammary gland 5' read
AI582287.1 Clone IMAGE:2213736 lung 3' read PA
AI734906.1 Clone IMAGE:2355068 vascular 3' read A
AI811865.1 Clone IMAGE:2262649 uterus 3' read A
BX351919.2 Clone CS0DI057YK21 placenta 3' read PA
BX360624.2 Clone CS0DI072YL05 placenta 3' read P
BX380748.2 Clone CS0DI057YK21 placenta 5' read
BX371888.2 Clone CS0DI072YL05 placenta 3' read P
CD050640.1 embryonic tissue 5' read P
AW079630.1 Clone IMAGE:2588735 esophagus 3' read
R72484.1 Clone IMAGE:156039 mammary gland 5' read
CK826508.1 Clone IMAGE:6133307 pancreas 3' read
AW872859.1 Clone IMAGE:3124645 mouth 3' read A
CN255288.1 embryonic tissue 5' read P
CN255289.1 embryonic tissue 5' read
CN255290.1 embryonic tissue 5' read P
CN255291.1 embryonic tissue 5' read
CN275849.1 embryonic tissue 5' read
T23489.1 Clone Hy18-Ch13-Charon40-cDNA-149 brain 3' read A
H09731.1 Clone IMAGE:45465 brain 3' read A
H10489.1 Clone IMAGE:45465 brain 5' read
T23618.1 Clone b4HB3MA-FT20%-Biotin-111 brain 3' read A
H16600.1 Clone IMAGE:49485 brain 3' read A
H16661.1 Clone IMAGE:49485 brain 5' read
AJ705848.1 Clone BLPD00932 bone marrow A
AJ708845.1 Clone CMPD03935 heart P
H21795.1 Clone IMAGE:160266 mammary gland 5' read
BE259221.1 Clone IMAGE:3356193 eye 5' read
BE314609.1 Clone IMAGE:3161564 brain 5' read PA
H25680.1 Clone IMAGE:162063 mammary gland 5' read
BE544532.1 Clone IMAGE:3464079 cervix 5' read
BE727455.1 Clone IMAGE:3830344 skin 5' read P
BE783077.1 Clone IMAGE:3873974 eye 5' read P
BE783413.1 Clone IMAGE:3874614 eye 5' read
BE794459.1 Clone IMAGE:3943868 lung 5' read P
DR001927.1 Clone TC105407 brain 5' read P
DR002080.1 Clone TC124821 brain 5' read
BF034155.1 Clone IMAGE:3860164 ovary 5' read P
CR977648.1 Clone RZPDp9016C1544 uncharacterized tissue 5' read
CR979346.1 Clone RZPDp9016D2112 uncharacterized tissue 5' read P
CR981554.1 Clone RZPDp9016I1726 uncharacterized tissue 5' read P
CR984535.1 Clone RZPDp9016B1233 uncharacterized tissue 5' read P
CR986454.1 Clone RZPDp9016E0629 uncharacterized tissue 5' read
CR986506.1 Clone RZPDp9016D2334 uncharacterized tissue 5' read
CR989980.1 Clone RZPDp9016J1741 uncharacterized tissue 5' read P
CR994915.1 Clone RZPDp9016J0230 uncharacterized tissue 5' read P
CR996262.1 Clone RZPDp9016K2420 uncharacterized tissue 5' read P
CT002611.1 Clone RZPDp9016A093 uncharacterized tissue 5' read P
BF847716.1 lung
BF847855.1 lung
BF847944.1 lung
T32122.1 brain 5' read
T32191.1 brain 5' read
T32197.1 skin 5' read
BG108437.1 Clone IMAGE:4366218 bone 5' read P
BG006408.1 placenta
BF984692.1 Clone IMAGE:4401160 intestine 5' read
BF968459.1 Clone IMAGE:4359362 adrenal gland 5' read
BG163749.1 Clone IMAGE:4446926 kidney 5' read P
BG180293.1 Clone IMAGE:4432590 prostate 5' read PA
AL521885.3 Clone CS0DB003YN06 uncharacterized tissue 3' read P
AL521886.3 Clone CS0DB003YN06 uncharacterized tissue 5' read P
BG337319.1 Clone IMAGE:4552909 uterus 5' read P
EC543901.1 prostate
BF170221.1 blood
BG476197.1 Clone IMAGE:4640290 skin 5' read P
D31387.1 lung 5' read
BI005236.1 thyroid
EL735902.1 mixed 5' read P
N79773.1 Clone IMAGE:300313 lung 3' read A
BI222760.1 Clone IMAGE:5104707 cervix 5' read P
BI223105.1 Clone IMAGE:5104708 cervix 5' read P
BI258589.1 Clone IMAGE:5109004 cervix 5' read P
BI521386.1 Clone IMAGE:5220522 mixed 5' read
BI522219.1 Clone IMAGE:5220522 mixed 3' read
N93472.1 Clone IMAGE:307332 lung 3' read A
BI767702.1 Clone IMAGE:5209742 mixed 5' read P
BI819405.1 Clone IMAGE:5175477 mixed 5' read P
BI834696.1 Clone IMAGE:5229213 mixed 5' read
BM009101.1 Clone IMAGE:5434791 skin 5' read P
W21243.1 Clone IMAGE:307332 lung 5' read
BM468690.1 Clone IMAGE:5535977 uterus 5' read P
BM672457.1 Clone UI-E-CQ0-adm-g-09-0-UI brain 3' read A
BM682529.1 Clone UI-E-EJ0-aig-n-24-0-UI eye 3' read PA
BM686460.1 Clone UI-E-CR0-adm-g-09-0-UI eye 5' read
BM709554.1 Clone UI-E-CQ1-afy-d-08-0-UI brain 5' read P
BM726095.1 Clone UI-E-EJ0-aig-n-24-0-UI eye 5' read
BM798207.1 Clone S22SNU16n1-81-D10 ascites 5' read A
BM969994.1 Clone UI-CF-EC1-abu-c-06-0-UI lung 3' read PA
BM970583.1 Clone UI-CF-EC1-abs-f-04-0-UI lung 3' read PA
BM970699.1 Clone UI-CF-EC1-acj-k-03-0-UI lung 3' read PA
BM985067.1 Clone UI-CF-EC1-ace-g-05-0-UI lung 3' read PA
BQ005424.1 Clone IMAGE:5848603 connective tissue 3' read PA
BQ022707.1 Clone UI-1-BB1p-axt-e-10-0-UI placenta 3' read PA
BQ068300.1 Clone IMAGE:5770552 brain 5' read
BQ330687.1 lung
BQ644842.1 Clone IMAGE:6293193 liver 5' read P
BQ648003.1 Clone IMAGE:6297009 liver 5' read P
BQ649142.1 Clone IMAGE:6284422 liver 5' read P
BQ709556.1 Clone IMAGE:6279081 spleen 5' read P
BQ898249.1 Clone IMAGE:6339737 brain 5' read P
BU500547.1 Clone IMAGE:6109105 cervix 5' read P
BU553231.1 Clone IMAGE:6577566 ovary 5' read
BU553707.1 Clone IMAGE:6580837 ovary 5' read P
BU597515.1 Clone IMAGE:6454385 mixed 5' read P
BU615948.1 Clone UI-H-DF0-bej-p-01-0-UI bone 3' read PA
BU733566.1 Clone UI-E-CQ1-afy-d-08-0-UI brain 3' read PA
CA422661.1 Clone UI-H-FL0-bdn-c-05-0-UI bone 3' read A
CA442135.1 Clone UI-H-DI0-avm-c-18-0-UI lung 3' read A
CA775351.1 Clone IMAGE:6133307 pancreas 3' read P
CA775643.1 Clone IMAGE:6133307 pancreas 5' read
AA404597.1 Clone IMAGE:725093 ovary 3' read A
AA404643.1 Clone IMAGE:725093 ovary 5' read
AA626893.1 Clone IMAGE:1091089 bone marrow 3' read A
T98739.1 Clone IMAGE:122202 mixed 5' read
T98740.1 Clone IMAGE:122202 mixed 3' read
AA706371.1 Clone IMAGE:1141886 testis 5' read PA
AA812105.1 Clone IMAGE:1333830 lymph node 3' read A
AA826523.1 Clone IMAGE:1415919 lung 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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