> Ring finger protein 175 (RNF175)
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UGID:207199     UniGene Hs.388364     Homo sapiens (human)   RNF175 Order cDNA clone, Links
Ring finger protein 175 (RNF175)

Human protein-coding gene RNF175. Represented by 44 ESTs from 27 cDNA libraries. EST representation biased toward soft tissue/muscle tissue tumor. Corresponds to reference sequence NM_173662.2. [UniGene 207199 - Hs.388364]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_775933.1 RNF175 gene product H. sapiens 100.0 327
XP_001155746.1 PREDICTED: RING finger protein 175 isoform 4 P. troglodytes 99.7 327
NP_956602.1 rnf175 gene product D. rerio 85.3 292
NP_083487.2 Rnf121 gene product M. musculus 78.0 312
NP_001086939.1 RING finger protein 121 X. laevis 77.3 316
NP_728100.1 CG15814, isoform D D. melanogaster 65.8 300
NP_497832.1 Protein RNF-121 C. elegans 48.1 338
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_001088194.1 PREDICTED: RING finger protein 175 M. mulatta 98.8 327
XP_003899330.1 PREDICTED: RING finger protein 175 P. anubis 98.5 336

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: soft tissue/muscle tissue tumor [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; connective tissue; eye; uncharacterized tissue; prostate; testis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q31.3
UniSTS entry: Chr 4 SHGC-50326
UniSTS entry: Chr 4 SHGC-18913
UniSTS entry: Chr 4 WI-22079 [Map Viewer]
UniSTS entry: Chr 4 SHGC-67265 [Map Viewer]
UniSTS entry: Chr 4 GDB:314973
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_173662.2 Homo sapiens ring finger protein 175 (RNF175), mRNA PA
BC034385.1 Homo sapiens ring finger protein 175, mRNA (cDNA clone MGC:35342 IMAGE:5180678), complete cds PA
AK091509.1 Homo sapiens cDNA FLJ34190 fis, clone FCBBF3017729 P

EST sequences (44)

R14087.1 Clone IMAGE:27414 brain 5' read P
AI023856.1 Clone IMAGE:1642701 testis 3' read PA
R19616.1 Clone IMAGE:34641 brain 5' read
AI142621.1 Clone IMAGE:1509839 mixed 3' read PA
AI365130.1 Clone IMAGE:2010345 uncharacterized tissue 3' read A
R59473.1 Clone IMAGE:37823 brain 3' read A
BX279796.1 Clone IMAGp998N1711437_;_IMAGE:5175760 mixed P
AI917412.1 Clone IMAGE:2237476 uncharacterized tissue 3' read A
AW051591.1 Clone IMAGE:2555589 mixed 3' read PA
F12464.1 Clone c-3ad02 brain P
CK003159.1 Clone IMAGE:30721021 brain 5' read
H09541.1 Clone IMAGE:45922 brain 3' read A
CV029608.1 mixed 5' read P
DN993066.1 Clone TC102294 brain 5' read
DR005596.1 Clone TC102426 prostate 5' read P
DA213440.1 Clone BRAWH3003188 brain 5' read
DA096682.1 Clone BRACE3006968 brain 5' read P
DA216593.1 Clone BRAWH3007293 brain 5' read P
DA502994.1 Clone FCBBF3017729 brain 5' read P
AV720984.1 Clone HTBBIC02 brain 5' read P
AV725561.1 Clone HTCCBE08 brain 5' read P
DB297305.1 Clone BRACE2016229 brain 3' read PA
DB315958.1 Clone FCBBF3017729 brain 3' read
DB326997.1 Clone OCBBF3006779 brain 3' read
DB493688.1 Clone H033052G24 brain 5' read P
DB564750.1 Clone H033052G24 brain 3' read PA
DT219088.1 brain
BG192672.1 connective tissue
BG202387.1 connective tissue P
BG206606.1 connective tissue P
BG209748.1 connective tissue
BG216633.1 connective tissue
BI522497.1 Clone IMAGE:5239933 brain 5' read P
BI551533.1 Clone IMAGE:5273827 brain 5' read P
BI819244.1 Clone IMAGE:5175760 mixed 5' read P
BI823123.1 Clone IMAGE:5180678 mixed 5' read P
BI917478.1 Clone IMAGE:5248812 brain 5' read
BM669323.1 Clone UI-E-DX1-agy-b-13-0-UI eye 3' read PA
BM699024.1 Clone UI-E-DX1-agy-b-13-0-UI eye 5' read
BM712498.1 Clone UI-E-EJ0-ahf-o-18-0-UI eye 5' read P
BQ638728.1 Clone hd26h11 eye 5' read P
BU734824.1 Clone UI-E-DW0-agi-g-01-0-UI eye 3' read PA
BU954254.1 Clone IMAGE:6725753 mixed 5' read A
T74439.1 Clone IMAGE:22414 brain 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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