> Nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1 (NUDT16P1)
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UGID:203685     UniGene Hs.380350     Homo sapiens (human)   NUDT16P1 Links
Nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1 (NUDT16P1)

Human pseudo gene NUDT16P1. Represented by 63 ESTs from 42 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 203685 - Hs.380350]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001147228.1 PREDICTED: U8 snoRNA-decapping enzyme isoform 1 P. troglodytes 96.2 182
NP_689608.2 NUDT16 gene product H. sapiens 85.2 182
NP_083661.2 Nudt16 gene product M. musculus 80.9 178
NP_001084713.1 U8 snoRNA-decapping enzyme X. laevis 56.9 144
Other hits (2 of 13) [Show all]SpeciesId(%)Len(aa)
XP_001115629.1 PREDICTED: u8 snoRNA-decapping enzyme-like isoform 2 M. mulatta 87.4 182
XP_003895165.1 PREDICTED: U8 snoRNA-decapping enzyme-like P. anubis 87.4 182

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: intestine; lung; kidney; mammary gland; prostate; muscle; liver; brain; pancreas; mixed; ovary; uncharacterized tissue; parathyroid; testis; trachea; skin; ascites; bone; embryonic tissue; heart
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3q22.1
UniSTS entry: Chr 3 RH92218
UniSTS entry: Chr 3 SHGC-77345 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AK000532.1 Homo sapiens cDNA FLJ20525 fis, clone KAT10610 PA
AK297126.1 Homo sapiens cDNA FLJ53804 complete cds, highly similar to Nucleoside diphosphate-linked moiety X motif 16 (EC 3.6.1.-) P
BC015593.2 Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene, mRNA (cDNA clone IMAGE:4645004) PA
NR_027766.1 Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1 (NUDT16P1), transcript variant 1, non-coding RNA PA
NR_002949.2 Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1 (NUDT16P1), transcript variant 2, non-coding RNA PA

EST sequences (63)

AA921732.1 Clone IMAGE:1457205 intestine 3' read A
AI041832.1 Clone IMAGE:1667712 parathyroid 3' read
AI054406.1 Clone IMAGE:1862458 ovary 3' read A
AI123501.1 Clone IMAGE:1683606 parathyroid 3' read A
AI140874.1 Clone IMAGE:1693380 heart 3' read A
CB048656.1 Clone IMAGE:3270843 prostate 5' read A
CB048655.1 Clone IMAGE:3270843 prostate 3' read
AI254278.1 Clone IMAGE:1983420 ovary 3' read A
AI270891.1 Clone IMAGE:1996162 ovary 3' read A
AI274112.1 Clone IMAGE:1875537 intestine 3' read
AI284828.1 Clone IMAGE:1965800 mammary gland A
AI285292.1 Clone IMAGE:1873323 intestine 3' read
AI306031.1 Clone IMAGE:1996815 ovary 3' read A
AI348538.1 Clone IMAGE:1910455 lung 3' read A
AI308082.1 Clone IMAGE:2055127 kidney 3' read A
AI308084.1 Clone IMAGE:2055131 kidney 3' read
AI733003.1 Clone IMAGE:1457205 intestine 3' read
AI769401.1 Clone IMAGE:2402718 kidney 3' read
AI769642.1 Clone IMAGE:2403829 kidney 3' read
AI791399.1 Clone IMAGE:1457205 intestine 5' read
AI791849.1 Clone IMAGE:1029213 intestine 5' read
AI807050.1 Clone IMAGE:2357796 mixed 3' read A
AW013977.1 Clone IMAGE:2709081 uncharacterized tissue 3' read
AW014348.1 Clone IMAGE:2710809 uncharacterized tissue 3' read A
BX470952.1 Clone DKFZp686I06123 muscle 5' read
BX489869.1 Clone DKFZp686L2262 muscle 5' read
BX500689.1 Clone DKFZp779G1358 liver 5' read
BX506328.1 Clone DKFZp686I09243 muscle 5' read
AW134713.1 Clone IMAGE:2712492 mixed 3' read
AW418868.1 Clone IMAGE:2874415 kidney 3' read
AW662631.1 Clone IMAGE:2974144 intestine 3' read
AW753596.1 intestine
BX951051.1 Clone DKFZp781G22102 uncharacterized tissue 5' read
AV660308.2 Clone GLCGGC05 liver 3' read
BE762906.1 brain
BE970040.1 Clone IMAGE:3950364 pancreas 5' read
BF111068.1 Clone IMAGE:3567255 lung 3' read A
DA541046.1 Clone FELNG2001051 lung 5' read P
BF062976.1 Clone IMAGE:3321622 intestine 3' read
DA645675.1 Clone MAMGL1000058 mammary gland 5' read P
BF589139.1 Clone IMAGE:3267245 mixed 3' read A
DB179915.1 Clone TKIDN2017639 kidney 5' read
DB069752.1 Clone TESTI4012083 testis 5' read P
DB229258.1 Clone TRACH3022333 trachea 5' read P
BG468822.1 Clone IMAGE:4645004 intestine 5' read
EL735983.1 mixed 5' read P
DC413417.1 Clone TLUNG2000415 lung 5' read P
DC349207.1 Clone DFNES2008004 skin 5' read P
BM825202.1 Clone S22SNU16n1-105-B03 ascites 5' read
BQ309431.1 mammary gland
BQ309458.1 mammary gland
BQ777088.1 Clone IMAGE:6032646 pancreas 5' read
BQ778196.1 Clone IMAGE:6032646 pancreas 3' read
BQ878009.1 Clone IMAGE:6084108 pancreas 5' read
BQ879754.1 Clone IMAGE:6210663 pancreas 5' read
BU158075.1 Clone IMAGE:6082805 pancreas 5' read
CA431328.1 Clone UI-H-FG1-bgm-h-01-0-UI bone 3' read A
AA425136.1 Clone IMAGE:760219 embryonic tissue 3' read
AA426204.1 Clone IMAGE:760219 embryonic tissue 5' read
T85083.1 Clone IMAGE:116708 mixed 5' read
AA554313.1 Clone IMAGE:1029213 intestine 3' read
AA857532.1 Clone IMAGE:1435096 intestine 3' read A
AA878735.1 Clone IMAGE:1417925 lung 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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