> Chromosome 2 open reading frame 71 (C2orf71)
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UGID:194871     UniGene Hs.354243     Homo sapiens (human)   C2orf71 Links
Chromosome 2 open reading frame 71 (C2orf71)

Human protein-coding gene C2orf71. Represented by 30 ESTs from 13 cDNA libraries. EST representation biased toward eye; fetus. Corresponds to reference sequence NM_001029883.2. [UniGene 194871 - Hs.354243]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001025054.1 C2orf71 gene product H. sapiens 100.0 1287
NP_666194.2 BC027072 gene product M. musculus 57.2 1278
Other hits (2 of 10) [Show all]SpeciesId(%)Len(aa)
XP_515380.2 PREDICTED: uncharacterized protein C2orf71 homolog P. troglodytes 98.4 1287
XP_003908509.1 PREDICTED: uncharacterized protein C2orf71 homolog P. anubis 92.0 1294

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: eye [show more like this]
fetus [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: eye; testis; prostate; mixed; brain
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2p23.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

NM_001029883.2 Homo sapiens chromosome 2 open reading frame 71 (C2orf71), mRNA PA
AK092250.1 Homo sapiens cDNA FLJ34931 fis, clone NT2RP7005629 P

EST sequences (30)

AI744063.1 Clone IMAGE:2317174 prostate 3' read
CD245267.1 Clone IMAGE:30376762 brain 5' read
CN478537.1 Clone UI-E-EJ1-ajp-h-19-0-UI eye 3' read A
DB044476.1 Clone TESTI2032458 testis 5' read
DA742287.1 Clone NT2RP7005629 testis 5' read P
DB324774.1 Clone NT2RP7005629 testis 3' read A
DY654765.1 Clone ucsc5_1.3.1.L1.1.E04 mixed
DY654766.1 Clone ucsc5_1.3.1.L1.1.E04 mixed P
BG394633.1 Clone IMAGE:4579387 eye 5' read
BM662692.1 Clone UI-E-CI1-aax-b-02-0-UI eye 3' read A
BM669582.1 Clone UI-E-DX1-agw-i-15-0-UI eye 3' read A
BM675245.1 Clone UI-E-EJ0-ahr-d-23-0-UI eye 3' read A
BM680702.1 Clone UI-E-EO1-ajc-d-09-0-UI eye 3' read A
BM681516.1 Clone UI-E-EJ0-aij-m-09-0-UI eye 3' read A
BM683239.1 Clone UI-E-EO1-ajd-l-18-0-UI eye 3' read A
BM683942.1 Clone UI-E-EJ1-ajk-f-05-0-UI eye 3' read A
BM685732.1 Clone UI-E-CK0-aaq-d-09-0-UI eye 5' read
BM698795.1 Clone UI-E-DX1-agw-i-15-0-UI eye 5' read
BM701367.1 Clone UI-E-EJ0-ahk-c-16-0-UI eye 5' read
BM714060.1 Clone UI-E-EJ0-ahr-d-23-0-UI eye 5' read
BM717131.1 Clone UI-E-EJ0-ahk-c-16-0-UI eye 5' read
BM718811.1 Clone UI-E-EO1-ajc-d-09-0-UI eye 5' read
BM719306.1 Clone UI-E-EO1-ajd-l-18-0-UI eye 5' read
BM721416.1 Clone UI-E-EO1-aib-n-22-0-UI eye 5' read P
BM726732.1 Clone UI-E-EJ0-aij-m-09-0-UI eye 5' read A
BQ185778.1 Clone UI-E-EJ1-ajp-h-19-0-UI eye 5' read A
BM931809.1 Clone UI-E-EJ1-ajk-f-05-0-UI eye 5' read A
W22453.1 eye
BU738609.1 Clone UI-E-EJ0-ahk-c-16-0-UI eye 3' read A
BU740486.1 Clone UI-E-EO1-aib-n-22-0-UI eye 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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