> Transmembrane protein 200C (TMEM200C)
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UGID:192911     UniGene Hs.346566     Homo sapiens (human)   TMEM200C Links
Transmembrane protein 200C (TMEM200C)

Human protein-coding gene TMEM200C. Represented by 35 ESTs from 20 cDNA libraries. Corresponds to reference sequence NM_001080209.1. [UniGene 192911 - Hs.346566]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003914226.1 PREDICTED: transmembrane protein 200C P. anubis 96.0 620
XP_001100757.1 PREDICTED: transmembrane protein TTMA-like M. mulatta 95.7 622
NP_001073678.1 TMEM200C gene product H. sapiens 95.0 562
NP_001193590.1 transmembrane protein 200C M. musculus 76.2 629
Other hits (2 of 13) [Show all]SpeciesId(%)Len(aa)
XP_529940.3 PREDICTED: transmembrane protein 200C P. troglodytes 92.6 552
XP_002713635.1 PREDICTED: transmembrane protein 200C O. cuniculus 80.5 623

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; mammary gland; uncharacterized tissue; embryonic tissue; lung; skin; testis; eye; placenta; heart; prostate
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 18
Map position: 18p11.31
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (1)

NM_001080209.1 Homo sapiens transmembrane protein 200C (TMEM200C), mRNA P

EST sequences (35)

AA910784.1 Clone IMAGE:1526679 mixed 3' read
AI185658.1 Clone IMAGE:1743858 lung 3' read P
AI279888.1 Clone IMAGE:1891919 placenta 3' read P
AI364292.1 Clone IMAGE:2018019 brain 3' read P
AI369169.1 Clone IMAGE:2017800 brain 3' read P
R47778.1 Clone IMAGE:153343 mammary gland 5' read
R48078.1 Clone IMAGE:153391 mammary gland 5' read
R50007.1 Clone IMAGE:153007 mammary gland 5' read
AI468065.1 Clone IMAGE:2162756 brain 3' read P
AI492620.1 Clone IMAGE:2020332 brain 3' read P
AI400230.1 Clone IMAGE:2113903 mixed 3' read P
AI815686.1 Clone IMAGE:2518126 brain 5' read P
AI886991.1 Clone IMAGE:2432627 brain 3' read P
AI869563.1 Clone IMAGE:2432938 brain 3' read P
AI992083.1 Clone IMAGE:2497868 uncharacterized tissue 3' read P
AW149736.1 Clone IMAGE:2620655 brain 3' read P
AW594224.1 Clone IMAGE:2950187 uncharacterized tissue 3' read P
CN313379.1 embryonic tissue 5' read
CX872220.1 Clone IMAGE:7486928 embryonic tissue 5' read A
R86119.1 Clone IMAGE:187426 mammary gland 5' read
DR761742.1 Clone IMAGE:7971180 embryonic tissue 5' read
N31056.1 Clone IMAGE:266377 skin 5' read
BI561172.1 Clone IMAGE:5296345 testis 5' read P
N98962.1 Clone IMAGE:279038 brain 5' read
W00467.1 Clone IMAGE:291195 skin 5' read
BM705128.1 Clone UI-E-CI1-afw-p-01-0-UI eye 5' read
BM718657.1 Clone UI-E-EO1-ajc-g-07-0-UI eye 5' read P
W68540.1 Clone IMAGE:342597 heart 5' read
CA944578.1 Clone UI-CF-FN0-afr-c-17-0-UI lung 3' read A
AA406287.1 Clone IMAGE:754544 mixed 3' read P
AA411273.1 Clone IMAGE:754544 mixed 5' read
AA443219.1 Clone IMAGE:813239 mixed 3' read
AA443260.1 Clone IMAGE:813237 mixed 5' read
AA447832.1 Clone IMAGE:813608 mixed 5' read
AA652497.1 Clone IMAGE:1188970 prostate


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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