> Chromosome 1 open reading frame 162 (C1orf162)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:178206     UniGene Hs.288010     Homo sapiens (human)   C1orf162 Order cDNA clone, Links
Chromosome 1 open reading frame 162 (C1orf162)

Human protein-coding gene C1orf162. Represented by 51 ESTs from 30 cDNA libraries. Corresponds to reference sequence NM_174896.2. [UniGene 178206 - Hs.288010]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001229548.1 uncharacterized protein LOC744603 P. troglodytes 100.0 154
NP_777556.1 C1orf162 gene product H. sapiens 100.0 154
Other hits (2 of 3) [Show all]SpeciesId(%)Len(aa)
XP_003892430.1 PREDICTED: transmembrane protein C1orf162 homolog P. anubis 89.0 154
XP_001094202.2 PREDICTED: transmembrane protein C1orf162-like M. mulatta 80.9 156

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; brain; mixed; lung; pharynx; liver; prostate; blood; mammary gland; connective tissue; muscle; intestine; embryonic tissue; ovary; lymph node; kidney; heart
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p13.2
UniSTS entry: Chr 1 RH93699
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

NM_174896.2 Homo sapiens chromosome 1 open reading frame 162 (C1orf162), mRNA PA
AK123160.1 Homo sapiens cDNA FLJ41165 fis, clone BRACE2040640 P
BC017973.1 Homo sapiens chromosome 1 open reading frame 162, mRNA (cDNA clone MGC:24133 IMAGE:4693393), complete cds PA

EST sequences (51)

AA903672.1 Clone IMAGE:1517722 uncharacterized tissue 3' read A
AA989407.1 Clone IMAGE:1606188 kidney 3' read A
AA911556.1 Clone IMAGE:1417791 lung 3' read A
AI421613.1 Clone IMAGE:2098511 brain 3' read A
AI431660.1 Clone IMAGE:2114555 mixed 3' read A
F25370.1 Clone s4000036H06 muscle
F35742.1 Clone sH5-000009-0/C04 muscle
R57987.1 Clone F7919 heart 5' read
AI985175.1 Clone IMAGE:2495741 kidney 3' read
AW016896.1 Clone IMAGE:2711868 uncharacterized tissue 3' read PA
CD695348.1 pharynx P
CD703490.1 pharynx P
AW662189.1 Clone IMAGE:2972922 mixed 3' read A
CR735306.1 Clone IMAGp958E121564_;_IMAGE:4716275 liver 5' read P
DR005702.1 Clone TC106962 prostate 5' read P
AV712255.2 Clone DCAAZA04 uncharacterized tissue 5' read P
AV712950.1 Clone DCAADC09 uncharacterized tissue 5' read P
AV713113.1 Clone DCAAKG05 uncharacterized tissue 5' read A
AV715751.1 Clone DCBBOC10 uncharacterized tissue 5' read
AV716324.1 Clone DCBAUF04 uncharacterized tissue 5' read P
AV741492.1 Clone CBNAAA06 blood 5' read A
AA862875.1 Clone IMAGE:1469807 uncharacterized tissue 3' read A
DA086090.1 Clone BRACE2040640 brain 5' read
AV716955.1 Clone DCBBOG01 uncharacterized tissue 5' read
AV717365.1 Clone DCBCCA12 uncharacterized tissue 5' read P
DB298125.1 Clone BRACE2040640 brain 3' read A
BF752020.1 mammary gland
BF939893.1 Clone IMAGE:3441031 brain 3' read A
BG545926.1 Clone IMAGE:4701365 lung 5' read P
BG540305.1 Clone IMAGE:4693393 lung 5' read P
BG542344.1 Clone IMAGE:4696032 lung 5' read
BG196952.1 connective tissue P
BG461272.1 connective tissue
N59284.1 Clone IMAGE:289749 brain 3' read A
N77056.1 Clone IMAGE:289749 brain 5' read
BG960125.1 intestine
EL735519.1 mixed 5' read P
BU198518.1 uncharacterized tissue P
BU198552.1 uncharacterized tissue P
BU198870.1 uncharacterized tissue P
FN140240.1 Clone 220717_2496_3853
FN163286.1 Clone 271907_0499_1325
FN165726.1 Clone 277620_3127_0543
FN066562.1 Clone 029722_0991_3233
CA439311.1 Clone UI-H-DT1-awa-f-10-0-UI connective tissue 3' read A
CA449728.1 Clone UI-H-EI1-ayy-o-13-0-UI connective tissue 3' read A
AA333542.1 embryonic tissue 5' read
AA363393.1 ovary 5' read
AA789100.1 Clone IMAGE:825898 lymph node 3' read A
AA761112.1 Clone IMAGE:1288161 lymph node 3' read A
AA806358.1 Clone IMAGE:1350874 lymph node 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help