> CASK interacting protein 2 (CASKIN2)
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UGID:173693     UniGene Hs.274408     Homo sapiens (human)   CASKIN2 Order cDNA clone, Links
CASK interacting protein 2 (CASKIN2)

Human protein-coding gene CASKIN2. Represented by 140 ESTs from 91 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 173693 - Hs.274408]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_065804.2 CASKIN2 gene product H. sapiens 100.0 1201
XP_001137464.1 PREDICTED: caskin-2 P. troglodytes 99.9 1053
NP_542374.2 caskin-2 M. musculus 94.0 1200
NP_001086927.1 caskin-2 X. laevis 62.2 1204
XP_003199651.1 PREDICTED: caskin-2 D. rerio 61.3 1292
Other hits (2 of 23) [Show all]SpeciesId(%)Len(aa)
XP_001097098.1 PREDICTED: caskin-2 isoform 1 M. mulatta 99.1 1203
XP_003913482.1 PREDICTED: caskin-2 P. anubis 99.0 1119

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; uterus; mouth; placenta; eye; prostate; mammary gland; nerve; stomach; ovary; spleen; intestine; lung; kidney; skin; pancreas; muscle; bone; mixed; connective tissue; embryonic tissue; liver; testis; larynx; trachea; adipose tissue; thymus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q25.1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BC066643.1 Homo sapiens CASK interacting protein 2, mRNA (cDNA clone MGC:70409 IMAGE:5576059), complete cds PA
AB032965.1 Homo sapiens mRNA for KIAA1139 protein, partial cds P
AK025262.1 Homo sapiens cDNA: FLJ21609 fis, clone COL07316 PA
AF451976.1 Homo sapiens cask-interacting protein 2 (CASKIN2) mRNA, complete cds P
AK300354.1 Homo sapiens cDNA FLJ53194 complete cds, highly similar to Caskin-2 P
BC032359.1 Homo sapiens CASK interacting protein 2, mRNA (cDNA clone IMAGE:5222780), with apparent retained intron PA
NM_001142643.2 Homo sapiens CASK interacting protein 2 (CASKIN2), transcript variant 2, mRNA PA
AK315936.1 Homo sapiens cDNA, FLJ78835 complete cds, highly similar to Caskin-2 P
NM_020753.4 Homo sapiens CASK interacting protein 2 (CASKIN2), transcript variant 1, mRNA PA

EST sequences (140)

AI039873.1 Clone IMAGE:1664260 skin 3' read A
AI078513.1 Clone IMAGE:1676665 embryonic tissue 3' read
BX117405.1 Clone IMAGp998B234941_;_IMAGE:2009014 uncharacterized tissue
CB142538.1 Clone L11SNU354s1-15-G06 liver 5' read P
CB216246.1 Clone IMAGE:5937696 uterus 5' read P
AI479679.1 Clone IMAGE:2162475 brain 3' read
AL037338.2 Clone DKFZp564F1071 brain 3' read A
AI886451.1 Clone IMAGE:2447788 stomach 3' read
AI917604.1 Clone IMAGE:2392278 intestine 3' read
AI637753.1 Clone IMAGE:2241670 uncharacterized tissue 3' read
AI640155.1 Clone IMAGE:2299552 kidney 3' read
BX327689.2 Clone CS0DC025YG20 uncharacterized tissue 5' read P
BX333405.2 Clone CS0DC025YG20 uncharacterized tissue 3' read P
BX391597.1 Clone CS0DC025YG20 uncharacterized tissue 3' read P
BX391598.2 Clone CS0DC025YG20 uncharacterized tissue 3' read P
AI873782.1 Clone IMAGE:2438512 uterus 3' read
AI970096.1 Clone IMAGE:2479179 uncharacterized tissue 3' read
AW005347.1 Clone IMAGE:2565647 brain 3' read
CD580470.2 Clone MPMGp800C17579 brain 5' read P
BX475828.1 Clone DKFZp686K23180 muscle 5' read P
AW088234.1 Clone IMAGE:2592406 brain 3' read
CF455159.1 Clone IMAGE:30517063 nerve 5' read P
CF456887.1 Clone IMAGE:30517823 nerve 5' read P
AW245153.1 Clone IMAGE:2819327 lung 3' read A
AW247551.1 Clone IMAGE:2819327 lung 5' read P
AW754495.1 intestine P
CK904068.1 Clone IMAGE:5672397 pancreas 5' read A
CK904067.1 Clone IMAGE:5672397 pancreas 3' read
CN337308.1 embryonic tissue 5' read P
CN337309.1 embryonic tissue 5' read
CN337310.1 embryonic tissue 5' read P
H09167.1 Clone IMAGE:46415 brain 3' read A
H09225.1 Clone IMAGE:46415 brain 5' read
BE072352.1 mammary gland P
BE206424.1 Clone IMAGE:3030156 ovary 3' read A
BE207664.1 Clone IMAGE:3030156 ovary 5' read
BE265978.1 Clone IMAGE:3537018 lung 5' read P
BE298107.1 Clone IMAGE:3027994 muscle 5' read P
BE294747.1 Clone IMAGE:3529293 muscle 5' read
CV569478.1 Clone od05h10 eye 5' read P
BE797739.1 Clone IMAGE:3936623 lung 5' read
R88677.1 Clone IMAGE:166511 brain 5' read
BF222349.1 Clone IMAGE:3649317 prostate 3' read
BF305172.1 Clone IMAGE:4138300 muscle 5' read
DA195032.1 Clone BRAMY4000391 brain 5' read P
DA313536.1 Clone BRHIP3003100 brain 5' read P
DA236454.1 Clone BRAWH3033123 brain 5' read P
DA246878.1 Clone BRAWH3045926 brain 5' read P
DA247255.1 Clone BRAWH3046414 brain 5' read P
DA151993.1 Clone BRAMY2010155 brain 5' read P
DA218497.1 Clone BRAWH3009688 brain 5' read
DA081335.1 Clone BRACE2034648 brain 5' read P
DA225775.1 Clone BRAWH3019280 brain 5' read P
DA538297.1 Clone FEKID2001077 kidney 5' read P
DA394702.1 Clone BRTHA2033732 brain 5' read P
DA435594.1 Clone CTONG2002365 mouth 5' read P
AW602667.1 mammary gland
DA805229.1 Clone OCBBF3020187 brain 5' read P
BF431550.1 Clone IMAGE:3574310 kidney 3' read
DA862831.1 Clone PLACE7016043 placenta 5' read P
DA935619.1 Clone SPLEN2007246 spleen 5' read P
BF530041.1 Clone IMAGE:4180362 brain 5' read A
DA792863.1 Clone OCBBF2032552 brain 5' read P
DA944904.1 Clone SPLEN2020193 spleen 5' read P
BF515582.1 Clone IMAGE:3083267 uncharacterized tissue 3' read A
BF516276.1 Clone IMAGE:3083914 uncharacterized tissue 3' read A
DA801415.1 Clone OCBBF3005622 brain 5' read P
DA952264.1 Clone SPLEN2029860 spleen 5' read P
DB276677.1 Clone UTERU3002136 uterus 5' read P
DB278374.1 Clone UTERU3004375 uterus 5' read P
DB291147.1 Clone UTERU3021424 uterus 5' read P
DB220280.1 Clone TRACH3010575 trachea 5' read
BF758329.1 intestine P
BF759399.1 intestine P
BF836289.1 larynx P
BG111552.1 Clone IMAGE:4370443 bone 5' read P
BF998786.1 placenta
BF998791.1 placenta
BF932433.1 brain
BF958444.1 brain
BY800474.1 Clone HE5533.seq eye 5' read P
BG251834.1 Clone IMAGE:4472724 liver 5' read P
BG421372.1 Clone IMAGE:4589618 kidney 5' read P
BG392360.1 Clone IMAGE:4539028 uncharacterized tissue 5' read A
BG491997.1 Clone IMAGE:4684693 skin 3' read
BG826821.1 Clone IMAGE:4904156 muscle 5' read
BG911701.1 Clone IMAGE:4940363 brain 5' read
BG913088.1 Clone IMAGE:4938763 brain 5' read P
BG913698.1 Clone IMAGE:4943102 brain 5' read
BI011157.1 lung P
BG953273.1 intestine
BI192709.1 Clone IMAGE:5088456 pancreas 5' read
DC322708.1 Clone BRAWH3023714 brain 5' read P
DC308822.1 Clone BRACE3027967 brain 5' read P
DC381909.1 Clone PLACE7008186 placenta 5' read P
DC309227.1 Clone BRACE3032360 brain 5' read P
DC318119.1 Clone BRAMY3015703 brain 5' read P
BI488529.1 Clone IMAGE:5191905 brain 5' read P
BI772150.1 Clone IMAGE:5204198 mixed 5' read P
BI820867.1 Clone IMAGE:5175311 mixed 5' read P
BI837871.1 Clone IMAGE:5222780 mixed 5' read P
BI966029.1 Clone IMAGE:5672397 pancreas 3' read
BI966142.1 Clone IMAGE:5672398 pancreas 5' read
BI966211.1 Clone IMAGE:5672397 pancreas 5' read
BM551249.1 Clone IMAGE:5738663 intestine 5' read P
BM555361.1 Clone IMAGE:5470421 skin 5' read P
BM674525.1 Clone UI-E-EJ0-ahl-k-01-0-UI eye 3' read A
BM674730.1 Clone UI-E-EJ0-ahm-a-10-0-UI eye 3' read A
BM687394.1 Clone UI-E-CQ1-ada-h-05-0-UI brain 5' read
BM716852.1 Clone UI-E-EJ0-ahl-k-01-0-UI eye 5' read P
BM717363.1 Clone UI-E-EJ0-ahm-a-10-0-UI eye 5' read
BM909051.1 Clone IMAGE:5431664 brain 5' read P
BM972560.1 Clone UI-CF-EC1-abq-p-22-0-UI lung 3' read A
BM994645.1 Clone IMAGE:5887854 connective tissue 3' read A
BM995511.1 Clone IMAGE:5889595 connective tissue 3' read A
BM995922.1 Clone IMAGE:5889419 connective tissue 3' read A
BQ027714.1 Clone IMAGE:3105875 uncharacterized tissue 3' read A
BQ229696.1 Clone IMAGE:6042859 uncharacterized tissue 5' read P
BQ306250.1 mammary gland P
BQ326917.1 intestine P
BQ717781.1 Clone IMAGE:6193400 nerve 5' read P
BG056705.1 Clone IMAGE:4169533 brain 3' read
BU628631.1 Clone UI-H-FG0-bdf-d-18-0-UI bone 3' read A
BU624833.1 Clone UI-H-FG1-bgl-a-11-0-UI bone 3' read A
AA218825.1 Clone IMAGE:649954 testis 5' read
CA392226.1 Clone cs22f10 eye 3' read A
CA392227.1 Clone cs22f10 eye 5' read P
CA406956.1 adipose tissue 5' read
CA424064.1 Clone UI-H-FE1-bdu-j-04-0-UI bone 3' read A
CA424135.1 Clone UI-H-FE1-bdv-i-06-0-UI bone 3' read A
CA437366.1 Clone UI-H-DT0-avk-g-17-0-UI connective tissue 3' read A
CA446908.1 Clone UI-H-ED0-aya-a-07-0-UI connective tissue 3' read A
CA502730.1 Clone UI-CF-FN0-afg-a-06-0-UI lung 3' read A
AA300357.1 thymus 5' read P
AA580924.1 Clone IMAGE:797380 testis 3' read A
AA580983.1 Clone IMAGE:797380 testis 5' read
AA586822.1 Clone IMAGE:1090088 intestine 3' read
AA586863.1 Clone IMAGE:1088977 larynx 3' read A
AA640137.1 Clone IMAGE:1128879 mammary gland 3' read
AA634224.1 Clone IMAGE:868142 lung 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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