Chromosome 7 open reading frame 57 (C7orf57)

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UGID:171539 UniGene Hs.258357 Homo sapiens (human) C7orf57

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Chromosome 7 open reading frame 57 (C7orf57)

Human protein-coding gene C7orf57. Represented by 8 ESTs from 5 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 171539 - Hs.258357]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_001093629.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	C7orf57 gene product	H. sapiens	100.0	294
NP_001033017.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Gm11992 gene product	M. musculus	77.3	290
NP_001090476.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	uncharacterized protein LOC779389	X. laevis	49.8	199
Other hits (2 of 14) [Show all]		Species	Id(%)	Len(aa)
XP_001146768.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein C7orf57-like	P. troglodytes	98.3	294
XP_003896047.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein C7orf57 homolog isoform 1	P. anubis	94.9	293

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	testis; larynx; brain; mixed

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	7
	Map position:	7p12.3

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

BC045737.1	Homo sapiens chromosome 7 open reading frame 57, mRNA (cDNA clone IMAGE:4827314), partial cds	PA
NM_001100159.2	Homo sapiens chromosome 7 open reading frame 57 (C7orf57), transcript variant 1, mRNA	PA
BC031107.1	Homo sapiens chromosome 7 open reading frame 57, mRNA (cDNA clone IMAGE:5295700), partial cds	PA
NM_001267866.1	Homo sapiens chromosome 7 open reading frame 57 (C7orf57), transcript variant 3, mRNA	PA
NM_001267865.1	Homo sapiens chromosome 7 open reading frame 57 (C7orf57), transcript variant 2, mRNA	PA

EST sequences (8)

BF355112.1		larynx
DB462648.1	Clone H013099F08	testis	5' read	P
DB528089.1	Clone H013099F08	testis	3' read	A
DB479136.1	Clone H023081J22	brain	5' read	P
BG722839.1	Clone IMAGE:4827314	testis	5' read	P
BI560281.1	Clone IMAGE:5295700	testis	5' read	P
BI560654.1	Clone IMAGE:5297059	testis	5' read	P
BI821988.1	Clone IMAGE:5181099	mixed	5' read	P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria