> Solute carrier family 4, sodium bicarbonate cotransporter, member 7 (SLC4A7)
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UGID:169545     UniGene Hs.250072     Homo sapiens (human)   SLC4A7 Links
Solute carrier family 4, sodium bicarbonate cotransporter, member 7 (SLC4A7)

Human protein-coding gene SLC4A7. Represented by 155 ESTs from 95 cDNA libraries. EST representation biased toward embryoid body. Corresponds to 3 reference sequences (different isoforms). [UniGene 169545 - Hs.250072]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_003606.3 SLC4A7 gene product H. sapiens 100.0 1213
XP_001165589.2 PREDICTED: sodium bicarbonate cotransporter 3 isoform 2 P. troglodytes 99.8 1258
XP_003895241.1 PREDICTED: sodium bicarbonate cotransporter 3 isoform 2 P. anubis 99.6 1258
NP_001028442.2 Slc4a7 gene product M. musculus 96.6 1130
NP_001084922.1 solute carrier family 4, sodium bicarbonate cotransporter, member 7 X. laevis 88.3 1115
XP_697323.4 PREDICTED: sodium bicarbonate cotransporter 3-like D. rerio 84.7 1282
NP_723264.1 Na[+]-driven anion exchanger 1, isoform B D. melanogaster 59.2 1024
NP_492258.1 Protein ABTS-1, isoform a C. elegans 55.2 1071
Other hits (2 of 37) [Show all]SpeciesId(%)Len(aa)
XP_002803086.1 PREDICTED: sodium bicarbonate cotransporter 3-like M. mulatta 98.7 1203
NP_001182765.1 eye sodium bicarbonate cotransport protein O. cuniculus 97.8 1212

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: embryoid body [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: vascular; mouth; embryonic tissue; thymus; brain; testis; uterus; muscle; stomach; uncharacterized tissue; mixed; lung; intestine; kidney; heart; mammary gland; trachea; liver; placenta; blood; connective tissue; lymph; prostate; ovary; thyroid; skin; spinal cord; ascites; nerve; adipose tissue; larynx; cervix; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p22
UniSTS entry: Chr 3 SHGC-76801 [Map Viewer]
UniSTS entry: Chr 3 SLC4A7_7948
UniSTS entry: Chr 3 WI-18242 [Map Viewer]
UniSTS entry: Chr 3 G59804
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (23)

NM_003615.4 Homo sapiens solute carrier family 4, sodium bicarbonate cotransporter, member 7 (SLC4A7), transcript variant 1, mRNA PA
CR627428.1 Homo sapiens mRNA; cDNA DKFZp686H168 (from clone DKFZp686H168) PA
AL389947.1 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 2005674 A
AF047033.1 Homo sapiens sodium bicarbonate cotransporter 3 (SLC4A7) mRNA, complete cds PA
AF089726.1 Homo sapiens sodium bicarbonate cotransporter 2b (NBC2B) mRNA, complete cds PA
AK310865.1 Homo sapiens cDNA, FLJ17907 P
AK309734.1 Homo sapiens cDNA, FLJ99775 P
EU499349.1 Homo sapiens clone NBCn1-G solute carrier family 4 sodium bicarbonate cotransporter member 7 (SLC4A7) mRNA, complete cds, alternatively spliced P
AL833589.1 Homo sapiens mRNA; cDNA DKFZp686D0264 (from clone DKFZp686D0264) A
EU934250.1 Homo sapiens clone NBCn1-C solute carrier family 4 sodium bicarbonate cotransporter member 7 (SLC4A7) mRNA, complete cds, alternatively spliced P
EU934249.1 Homo sapiens clone NBCn1-E solute carrier family 4 sodium bicarbonate cotransporter member 7 (SLC4A7) mRNA, complete cds, alternatively spliced P
EU934248.1 Homo sapiens clone NBCn1-D solute carrier family 4 sodium bicarbonate cotransporter member 7 (SLC4A7) mRNA, complete cds, alternatively spliced P
EU934247.1 Homo sapiens clone NBCn1-Hb solute carrier family 4 sodium bicarbonate cotransporter member 7 (SLC4A7) mRNA, complete cds, alternatively spliced P
EU934246.1 Homo sapiens clone NBCn1-Ha solute carrier family 4 sodium bicarbonate cotransporter member 7 (SLC4A7) mRNA, complete cds, alternatively spliced P
FJ178576.1 Homo sapiens solute carrier family 4 sodium bicarbonate cotransporter member 7 type 2 variant (SLC4A7) mRNA, complete cds, alternatively spliced P
FJ178575.1 Homo sapiens solute carrier family 4 sodium bicarbonate cotransporter member 7 type 1 variant (SLC4A7) mRNA, complete cds, alternatively spliced P
FJ178574.1 Homo sapiens solute carrier family 4 sodium bicarbonate cotransporter member 7 type 3 variant (SLC4A7) mRNA, complete cds, alternatively spliced P
GU354307.1 Homo sapiens solute carrier family 4 sodium bicarbonate cotransporter member 7 truncated type 4 variant mRNA, complete cds, alternatively spliced P
GU354310.1 Homo sapiens solute carrier family 4 sodium bicarbonate cotransporter member 7 truncated type 1b variant mRNA, complete cds, alternatively spliced P
GU354309.1 Homo sapiens solute carrier family 4 sodium bicarbonate cotransporter member 7 truncated type 2b variant mRNA, complete cds, alternatively spliced P
GU354308.1 Homo sapiens solute carrier family 4 sodium bicarbonate cotransporter member 7 mRNA, complete cds, alternatively spliced P
NM_001258380.1 Homo sapiens solute carrier family 4, sodium bicarbonate cotransporter, member 7 (SLC4A7), transcript variant 3, mRNA PA
NM_001258379.1 Homo sapiens solute carrier family 4, sodium bicarbonate cotransporter, member 7 (SLC4A7), transcript variant 2, mRNA PA

EST sequences (155)

AA968604.1 Clone IMAGE:1578348 mixed 3' read
BX098726.1 Clone IMAGp998L21461_;_IMAGE:229796 mixed
AI174325.1 Clone IMAGE:1698909 kidney 3' read A
CB117153.1 Clone L4SNU368-28-G11 liver 5' read
CB155271.1 Clone B2N807043-14-E06 brain 5' read
AI453320.1 Clone IMAGE:2142947 stomach 3' read A
AI633504.1 Clone IMAGE:2123788 mixed 3' read A
AI686897.1 Clone IMAGE:2206625 uterus 3' read A
AI690834.1 Clone IMAGE:2208590 uterus 3' read A
R57438.1 Clone F3113 heart 5' read
AI801260.1 Clone IMAGE:2185203 stomach 3' read A
AL045675.2 Clone DKFZp434B136 testis 5' read P
F00103.1 Clone 20G08 muscle
Z19373.1 Clone 20G08 muscle
CB990640.1 Clone IMAGE:30343752 placenta 5' read P
BX362427.2 Clone CS0DJ015YE05 blood 5' read P
BX436304.2 Clone CS0CAP001YI03 thymus 5' read
CD356572.1 Clone IMAGE:30403886 vascular 5' read
CD512255.1 Clone IMAGE:30406258 mixed 5' read
BX470762.1 Clone DKFZp686B05116 muscle 5' read
BX482450.1 Clone DKFZp686O19230 muscle 5' read
BX490946.1 Clone DKFZp686K0392 muscle 5' read
BX505513.1 Clone DKFZp686J02202 muscle 5' read
BX509853.1 Clone DKFZp686P1181 muscle 5' read
AW051832.1 Clone IMAGE:2555659 mixed 3' read P
AW103613.1 Clone IMAGE:2614254 brain 3' read A
AW183630.1 Clone IMAGE:2633351 uterus 3' read A
BX644179.1 Clone DKFZp781G2131 uncharacterized tissue 5' read
AW275259.1 Clone IMAGE:2824662 brain 3' read A
AW380894.1 mouth
AW752422.1 intestine
CN295838.1 embryonic tissue 5' read
CN295839.1 embryonic tissue 5' read
CN295837.1 embryonic tissue 5' read
CN299955.1 embryonic tissue 5' read P
CN299956.1 embryonic tissue 5' read
CN299957.1 embryonic tissue 5' read P
CN299958.1 embryonic tissue 5' read P
CN299959.1 embryonic tissue 5' read
CN299960.1 embryonic tissue 5' read P
CN299961.1 embryonic tissue 5' read P
CN299953.1 embryonic tissue 5' read P
CN299954.1 embryonic tissue 5' read P
AW970429.1 uncharacterized tissue
AW972184.1 uncharacterized tissue
BE002767.1 mammary gland P
BE086196.1 mammary gland
CR744695.1 Clone IMAGp998P045399_;_IMAGE:2185203 stomach 3' read A
BP245318.1 Clone HKR03031 kidney 5' read
BP363624.1 Clone TIR02006 lung 5' read P
BP290070.1 Clone LNF03977 lung 5' read
BP290324.1 Clone LNF04720 lung 5' read
BP346940.1 Clone SZB02425 brain 5' read P
CV372048.1 intestine
BE612799.1 Clone IMAGE:3856267 ovary 5' read
BE814802.1 mammary gland P
DN996550.1 Clone TC117890 mammary gland 5' read P
BE963007.2 Clone IMAGE:3856267 ovary 3' read A
AV715408.1 Clone DCBBCD08 uncharacterized tissue 5' read
BF082984.1 intestine P
BF109567.1 Clone IMAGE:3527372 mixed 3' read P
BF229390.1 intestine P
BF333321.1 intestine P
DA124622.1 Clone BRACE3047035 brain 5' read
DA164693.1 Clone BRAMY2025553 brain 5' read
H66520.1 Clone IMAGE:229796 mixed 5' read
H66521.1 Clone IMAGE:229796 mixed 3' read
DA102395.1 Clone BRACE3014981 brain 5' read
DA024366.1 Clone ASTRO2006948 brain 5' read
DA319741.1 Clone BRHIP3012122 brain 5' read
DA025598.1 Clone ASTRO2008566 brain 5' read
BF696877.1 Clone IMAGE:4286404 brain 5' read
DA660946.1 Clone MESAN2018051 kidney 5' read
DA552003.1 Clone HCHON2001458 connective tissue 5' read P
DA664048.1 Clone N1ESE2002441 uncharacterized tissue 5' read
DA619162.1 Clone JCMLC1000160 uncharacterized tissue 5' read
DA370184.1 Clone BRTHA1000019 brain 5' read
DA398788.1 Clone BRTHA3001026 brain 5' read
DA549239.1 Clone HCASM2007719 vascular 5' read
DA598563.1 Clone HSYRA2003192 connective tissue 5' read
DA994184.1 Clone SYNOV4006930 connective tissue 5' read
DA750389.1 Clone NT2RP7016084 testis 5' read
DA830317.1 Clone PLACE1004813 placenta 5' read
DA859171.1 Clone PLACE7011031 placenta 5' read
DA756057.1 Clone NT2RP8002655 testis 5' read P
DB375427.1 Clone PLACE1004813 placenta 3' read A
DB147227.1 Clone THYMU3022789 thymus 5' read
DB226018.1 Clone TRACH3018122 trachea 5' read
DB161813.1 Clone THYMU3042486 thymus 5' read
DB132397.1 Clone THYMU3002364 thymus 5' read
DB238726.1 Clone TRACH3034739 trachea 5' read
DB324654.1 Clone NT2RP7002320 testis 3' read P
DB220287.1 Clone TRACH3010586 trachea 5' read P
DB111007.1 Clone THYMU2014370 thymus 5' read
DW419112.1 liver
DW446093.1 liver
DW450551.1 liver
DW457572.1 liver
BF844858.1 larynx
BF917509.1 uterus P
BG177280.1 Clone IMAGE:4420409 lymph 5' read
BG251273.1 Clone IMAGE:4474441 liver 5' read
EB388342.1 Clone nbj43h06 brain 5' read P
EC498376.1 prostate
EC505540.1 prostate
BG430312.1 Clone IMAGE:4615588 kidney 5' read
EC581801.1 prostate
BG390609.1 Clone IMAGE:4524575 uncharacterized tissue 5' read
BG501605.1 Clone IMAGE:4654882 testis 5' read
BG546065.1 Clone IMAGE:4701234 lung 5' read
BG547384.1 Clone IMAGE:4702755 lung 5' read P
BI004907.1 thyroid
BG960084.1 intestine P
ES308198.1 skin 5' read
AL596760.1 Clone DKFZp451F171 spinal cord 5' read P
AL597361.1 Clone DKFZp313I2412 uncharacterized tissue 5' read
AL599241.1 Clone DKFZp313N1225 uncharacterized tissue 5' read
BM449952.1 Clone IMAGE:5528693 skin 5' read
BM464519.1 Clone IMAGE:5535609 uterus 5' read
BM747860.1 Clone S2SNU668-20-F12 ascites 5' read
BM801129.1 Clone IMAGE:5519256 uterus 5' read P
BM982237.1 Clone UI-CF-EN1-acr-d-12-0-UI lung 3' read A
AL700028.1 Clone DKFZp686O08116 muscle 5' read
AL700247.1 Clone DKFZp686A12118 muscle 5' read
AL700529.1 Clone DKFZp686E24119 muscle 5' read
AL700930.1 Clone DKFZp686O0811 muscle 5' read
AL710448.1 Clone DKFZp686E146 muscle 5' read P
BQ215266.1 Clone IMAGE:6057892 lung 5' read
BQ222900.1 Clone IMAGE:6052108 uncharacterized tissue 5' read
BQ354905.1 thyroid
BQ950254.1 Clone IMAGE:6201979 nerve 5' read
AA101282.1 Clone IMAGE:563823 testis 5' read
FN149378.1 Clone 241313_0984_1572
FN140303.1 Clone 220873_3779_3305
FN110460.1 Clone 146352_3502_3080
FN123566.1 Clone 180046_1349_1212
FN098335.1 Clone 113653_1226_0848
FN082118.1 Clone 068769_1412_3387
BY993831.1 Clone MCN0181 5' read
AA188932.1 Clone IMAGE:632906 testis 3' read A
AA205898.1 Clone IMAGE:632906 testis 5' read
AA216661.1 Clone IMAGE:649838 testis 3' read P
AA218565.1 Clone IMAGE:649838 testis 5' read P
AA227419.1 Clone IMAGE:663659 testis 5' read
BU852636.1 Clone IMAGE:6619103 testis 5' read
BU860875.1 Clone IMAGE:6652119 mixed 5' read
AA243166.1 Clone IMAGE:664517 testis 3' read A
AA243228.1 Clone IMAGE:664517 testis 5' read P
BU959416.1 Clone IMAGE:6737818 mixed 5' read
AA494043.1 Clone IMAGE:939208 adipose tissue A
AA476540.1 Clone IMAGE:785285 embryonic tissue 5' read
AA535856.1 Clone IMAGE:927152 intestine 3' read A
AA569234.1 Clone IMAGE:1061752 adipose tissue A
AA630595.1 Clone IMAGE:856138 cervix 3' read A
AA852668.1 Clone NHTBCae15c03 bone P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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