Tripartite motif containing 43 (TRIM43)

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UGID:166813 UniGene Hs.232026 Homo sapiens (human) TRIM43

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Tripartite motif containing 43 (TRIM43)

Human protein-coding gene TRIM43. Represented by 7 ESTs from 6 cDNA libraries. Corresponds to reference sequence NM_138800.1. [UniGene 166813 - Hs.232026]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_620155.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	TRIM43 gene product	H. sapiens	100.0	445
Other hits (2 of 10) [Show all]		Species	Id(%)	Len(aa)
XP_001141597.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: tripartite motif-containing protein 43-like	P. troglodytes	97.8	445
XP_001111866.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: tripartite motif-containing protein 43B-like	M. mulatta	88.1	277

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources.
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	uncharacterized tissue; lung; mixed; placenta; connective tissue

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	2
	Map position:	2q11.1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (2)

	BC015353.1	Homo sapiens tripartite motif-containing 43, mRNA (cDNA clone MGC:21446 IMAGE:3445177), complete cds	PA
	NM_138800.1	Homo sapiens tripartite motif containing 43 (TRIM43), mRNA	PA

EST sequences (7)

AI458559.1	Clone IMAGE:2149421	lung	3' read
AW015073.1	Clone IMAGE:2709573	uncharacterized tissue	3' read	PA
AW594534.1	Clone IMAGE:2950556	uncharacterized tissue	3' read	A
AW594561.1	Clone IMAGE:2950652	uncharacterized tissue	3' read	A
CV023479.1		mixed	5' read	P
BE535440.1	Clone IMAGE:3445177	placenta	5' read	P
BG199399.1		connective tissue		P

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria